Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq17 210 2e-49 seq36 118 1e-21 >seq17 Length=408792 Score = 210 bits (232), Expect = 2e-49 Identities = 480/714 (67%), Gaps = 15/714 (2%) Strand=Plus/Minus Query 53243 GAGACGTACGACTTAATG---AGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTC 53299 ||||||||| || | ||| ||| |||||||| || || || | || || || ||| Sbjct 106330 GAGACGTACAACCTCATGTCTAGC---AAGTACTTCACACATGCATCTCCCACACTCTTC 106274 Query 53300 AACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGAC 53359 || |||||||| ||| | || |||| |||||| ||||| | |||||||| ||| Sbjct 106273 AATGCTGGTACTCCTCAGGCCCAACTGTCTTCCTGCTTTCTGGTCGACATGAAGGAGGAC 106214 Query 53360 TCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGT 53419 ||||| || ||||| || || || ||| |||||| ||||| ||| | | ||| Sbjct 106213 AGCATCGAGGGTATCTATGACACCCTGAAGACCTGTGCCATGATCTCAAAGATGGCAGGT 106154 Query 53420 GGTATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGA 53477 || || || || | || || | || | ||||||| || | || || |||| Sbjct 106153 GGCATTGGCCTCAA-TGTTC-ATCGCATTCGTGCGACTGGTTCTTACATTGCTGGCACGA 106096 Query 53478 ACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACG 53537 |||| | | || || || || ||||| || |||||||||||||| || | |||| Sbjct 106095 ACGGAACATCAAACGGCATTGTCCCCATGCTGCGTGTCTTCAACAACACTGCGAGATACG 106036 Query 53538 TCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACG 53597 || | |||||||| ||||| || | ||||| |||||||| ||||| ||||||| Sbjct 106035 TCGATCAGGGTGGCAACAAGCGTCCCGGTGCCTTCGCTATCTACCTTGAGCCATGGCACG 105976 Query 53598 CCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC- 53656 | || | | |||||||| || || ||| ||| || || | || || | || ||| Sbjct 105975 CGGATGTCTTCGAGTTTCTTGATCTCCGTAAGAACCACGGCAAGGAGGAAGTCCG-TGCT 105917 Query 53657 CGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGAC 53716 || || || || ||||| |||||||| || ||||||||| | || |||| || Sbjct 105916 CGCGATCTTTTCCTCGCTCTTTGGATTCCTGATCTCTTCATGAAGCGAGTCGAGAGAAAC 105857 Query 53717 GAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAG 53776 | || ||| | |||||||| || |||||||| || || | ||||||||| || Sbjct 105856 GGCGACTGGACTTTAATGTGCCCCAATGAGTGCCCTGGTCTGGCTGATGTCTACGGCGAT 105797 Query 53777 GAGTTTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAG 53836 ||||| | | |||| || |||| | |||| ||| |||| || ||||| Sbjct 105796 GAGTTCGAGGCTCTGTACGAGAAATACGAGGCCGAGGGACGCGGCAAGTCGA---TCAAG 105740 Query 53837 GCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATG 53896 || | || | ||| |||| |||||| || ||| ||||| || | || | ||| Sbjct 105739 GCCCAGAAGCTCTGGTATGCCATCCTCGAGGCGCAGACCGAGACTGGTAACCCTTTTATG 105680 Query 53897 TGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATC 53950 |||||||||| |||| |||||||||||||||||| | ||| |||| Sbjct 105679 CTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTTGGCACCATC 105626 Score = 107 bits (118), Expect = 2e-18 Identities = 297/449 (66%), Gaps = 11/449 (2%) Strand=Plus/Minus Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543 |||||| | || | ||||||| ||||| || || || || |||||||| |||||||| Sbjct 105112 CGCAACAGCTTGTTGATGGCGCCCATGCCTACTGCTTCCACCTCTCAGATCCTGGGCAAC 105053 Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603 || ||| |||||||| |||||| ||||||| ||| || || || || || || Sbjct 105052 AATGAGTGCTTCGAGCCCTACACGTCCAACATTTACTCTCGTCGTGTTCTGGCTGGCGAT 104993 Query 55604 TTTGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACCCG 55663 || | ||||| ||| ||||||||||| | || ||| Sbjct 104992 TTCCAGGTTGTCAACCCCTGGCTCCTCAAGGACCTGGTCGACATGGGTCTCTGGTCTGAC 104933 Query 55664 CAGATCAAGA--CGGAT-ATTGTGCGGAACGGGGGGTCCGTCCAGAATCTGG---AGATT 55717 | || |||| || || |||| |||||| ||||| ||||| | | ||| Sbjct 104932 AACATGAAGAATCGTATTATTGCCGAGAACGGT---TCCGTTCAGAACATCCCCAATATT 104876 Query 55718 CCTCTGCGTC-TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGAT 55776 || | || |||||| | ||| ||| || ||||| || |||||| || | | Sbjct 104875 CC-CGCCGAAGTCAAGGCCCTGTACAAGACCGTTTGGGAAATCTCACAGAGGACCGTCGT 104817 Query 55777 TGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCAT 55836 | | ||| || |||||||| || | ||| |||||||||||||||||||||||| ||| Sbjct 104816 TCAGATGGCCGCCGATCGTGGCGCCTTCATTGACCAGTCCCAGTCTCTGAACATCCACAT 104757 Query 55837 GGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACT 55896 | | | || | ||| |||| | | | |||||||| ||| |||||| ||||| Sbjct 104756 GAAAGACCCCACCATGGGCAAGATCACCAGCATGCACTTCGCCGGCTGGAAGCTTGGACT 104697 Query 55897 CAAGACGGGTATGTACTATCTGCGGACCC 55925 ||||| || |||||||| ||| | |||| Sbjct 104696 GAAGACAGGCATGTACTACCTGAGAACCC 104668 >seq36 Length=2360352 Score = 118 bits (130), Expect = 1e-21 Identities = 179/253 (71%), Gaps = 4/253 (2%) Strand=Plus/Minus Query 117311 ATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTC 117370 |||||||||| ||| |||||||| |||||| || ||||| | ||||| | ||||| Sbjct 587803 ATGTAACGAGGGCTGGCAGCATCAGAGCCACCGGCTAGACGGGACCCGAAGTTACCACTG 587744 Query 117371 GGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTA 117430 ||||| | || | |||||||| || ||||||| || |||||| || || || Sbjct 587743 GGCTCGAGACAATTGACGTTGTTGGAACCAACAAAGTCCTGTGCCAAGCCGATGATGGTT 587684 Query 117431 CCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGC 117490 || ||| | || || || ||||| || |||||||| | ||||| || |||| | Sbjct 587683 TGCTGCAGGGATACTTCGCCGTGATGATAAGCAGTCTGCTCAGAGACGTAACCAGCCAAC 587624 Query 117491 TGAGCCACCTTCATGTC--TGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGC 117548 | | |||||| |||| | ||| || || ||| | ||| |||||||| ||||||| Sbjct 587623 TCAATGACCTTCTTGTCCTTTACG--AGATTTCGCTTCAAGCAAGCATAAATGACCTTGC 587566 Query 117549 GCTGACTTGGCTT 117561 |||||| ||||| Sbjct 587565 GCTGACCAGGCTT 587553 Score = 98.7 bits (108), Expect = 1e-15 Identities = 189/279 (68%), Gaps = 0/279 (0%) Strand=Plus/Minus Query 152034 GATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGA 152093 |||||| || | |||||| ||||| |||||| || || || | || || | ||| Sbjct 587804 GATGTAACGAGGGCTGGCAGCATCAGAGCCACCGGCTAGACGGGACCCGAAGTTACCACT 587745 Query 152094 GGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGT 152153 ||||||||| |||| |||||||| || || || | ||| ||||| | || || Sbjct 587744 GGGCTCGAGACAATTGACGTTGTTGGAACCAACAAAGTCCTGTGCCAAGCCGATGATGGT 587685 Query 152154 GCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAA 152213 |||||| |||| ||||| ||||| || |||||||| | || ||| || ||||| Sbjct 587684 TTGCTGCAGGGATACTTCGCCGTGATGATAAGCAGTCTGCTCAGAGACGTAACCAGCCAA 587625 Query 152214 CTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCG 152273 || |||||| ||||| | || || ||| | || || ||||| |||||||| Sbjct 587624 CTCAATGACCTTCTTGTCCTTTACGAGATTTCGCTTCAAGCAAGCATAAATGACCTTGCG 587565 Query 152274 CTGGGATGGTTTCAAACCGTCCACCACGTGAGGAATCGA 152312 ||| || || || ||||| | || | ||| || || Sbjct 587564 CTGACCAGGCTTAAACCCGTCAAGCATGGAAGGGATTGA 587526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215746912600