Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04-
20] 37 sequences; 44,711,451 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq17 259 5e-64
seq37 187 3e-42
seq23 149 7e-31
seq34 134 2e-26
seq36 125 8e-24
>seq17
Length=408792
Score = 259 bits (286), Expect = 5e-64
Identities = 1128/1759 (64%), Gaps = 68/1759 (4%)
Strand=Plus/Plus
Query 80032 GCCCGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGC 80091
||| | || | ||| ||||||||||| ||||| || || |||||||||| | ||||
Sbjct 104664 GCCTGGGTTCTCAGGTAGTACATGCCTGTCTTCAGTCCAAGCTTCCAGCCGGCGAAGTGC 104723
Query 80092 ATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGA 80151
|| ||| ||| | | ||||||| | |||| ||||||||||||||| |||||
Sbjct 104724 ATGCTGGTGATCTTGCCCATGGTGGGGTCTTTCATGTGGATGTTCAGAGACTGGGACTGG 104783
Query 80152 CAGATGAAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCAT 80211
||||| || |||||||| || ||||| | || | | | | |||| ||||||||
Sbjct 104784 TCAATGAAGGCGCCACGATCGGCGGCCATCTGAACGACGGTCCTCTGTGAGATTTCCCAA 104843
Query 80212 ACTGTACGATACA---CCTTACGAAGCTCCTCTGGAATGTCCAGATTTTGCACACTGCCA 80268
|| || |||| |||| | || | ||||| | | | | | | | |
Sbjct 104844 ACGGTCTTGTACAGGGCCTTG---ACTTCGGCGGGAATATTGGGGATGTTCTGAACGGAA 104900
Query 80269 CCGTCCTTTACAATTT---GATTTTTCAATT---CAGACGTCCAGACACCAAGCTTGTGC 80322
|||| || |||| |||| |||| | ||||| |||| ||| | | | |
Sbjct 104901 CCGTTCTCGGCAATAATACGATTCTTCATGTTGTCAGAC---CAGAGACCCATGTCGACC 104957
Query 80323 AGATCTTTCACAAG---GTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGC 80379
|| || || | || | | ||| || | || | || || || || |||||
Sbjct 104958 AGGTCCTTGAGGAGCCAGGGGTTGACAACCTGGAAA---TCGCCAGCCAGAACACGACG- 105013
Query 80380 AGA-TACAGGTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGT 80438
||| || | ||| | ||||| ||||| || ||| ||||| || |||||||||| ||
Sbjct 105014 AGAGTAAATGTTGGACGTGTAGGGCTCGAAGCACTCATTGTTGCCCAGGATCTGAGAGGT 105073
Query 80439 GCTCGCCGTCGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATC 80498
| || || ||||| || | | ||||| || || | || || | |||||| |
Sbjct 105074 GGAAGCAGTAGGCATGGGCGCCATCAACAAGCTGTTGCGAATACCATGTTCCTTGATCTG 105133
Query 80499 CTCGCGCAAATCTGACCAAAAATCA---ACCCCA-ACGCTGTGACC--CCACATGTCGTG 80552
| || |||| |||| | || | | || || ||||||||| |
Sbjct 105134 AGCTTTCAG---TGACTCCCAATCCCAGAGGTCAGATGGAGTAACGTTCCACATGTCATA 105190
Query 80553 CTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTT 80612
||| | ||| |||| || | ||||| || || | || ||| || |||| | ||
Sbjct 105191 CTGGAGGATACCCTTGGAGACAGGAGAGCCTTCGTAGGTGGAGTAGGGACCCTGCTCTTT 105250
Query 80613 GGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTT 80672
||| || | || || | | || || || || | | ||| |||| ||||||
Sbjct 105251 GGCGAGGTTCATGGAGGCCGTCAATGCAGCATGGTAGAGGGTCTCGAAGATCTGCTTGTT 105310
Query 80673 CACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAG 80732
|| | |||| ||| ||||| | || || | || ||| ||||||| ||
Sbjct 105311 CAGCTGTCTGGCCTCTGGTGACTCGAAGGGCATGCGGAGAGCCAAGAAAGCGTCAGCAAG 105370
Query 80733 GCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCG-GCCTCCGGAA 80791
||||| || || | | | || ||||| ||| | || | | || ||||| || |
Sbjct 105371 ACCCTGGACACCAAGACCAACAGGTCGGTGTCGCATATT-GCTGTTCCGTGCCTCAGGTA 105429
Query 80792 TTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACAT 80851
||||| ||| ||||| | |||||| ||||| ||| ||| |||| || |
Sbjct 105430 CAGGGTAGTGGTTGACGTCGATAATCTTGTTCAGATTGCGAACAACGACCTGTGTGACCT 105489
Query 80852 CATGAAGTTTCTGAAAGTCGAATTGGTTCCCCT-------TCA-CAAATGCCGG-AAGGC 80902
||||||| ||||||||||| || || ||| ||| | || | || || ||
Sbjct 105490 CATGAAGCTTCTGAAAGTC--ATACGTGCCCGAGTTGTAATCAACGAACGAGGGCAAAGC 105547
Query 80903 TCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCG 80962
|| ||| ||||| |||||||| || ||||| |||| | | |||||| ||| || |
Sbjct 105548 -CATGGATGCCAGGTTGCACACAGCAACCTCATCAGGAGCGCAGTACTCGATGATCTCTG 105606
Query 80963 TGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAG 81022
|||| | ||| || || || || ||||| |||||||| |||| ||||||
Sbjct 105607 TGCAAAGATTGGAGCTGCGGATGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGT 105666
Query 81023 CGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCC 81082
||||||||| ||| | ||| |||| |||||| ||| | || ||||||||| | ||
Sbjct 105667 GATCCTTGTAGAGCATAAAAGGGTTACCAGTCTCGGTCTGCGCCTCGAGGATGGCATACC 105726
Query 81083 AAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAG 81142
| | || | ||||||| | ||||| | | || |||||| | || || ||||
Sbjct 105727 AGAGCTTCTGGGCCTTGATCGACTTGCCGCGT---CCCTCGGCCTCGTATTTCTCGTACA 105783
Query 81143 CTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCA 81202
| ||||||| | |||| | |||| || | |||||||| || |||||||| |
Sbjct 105784 GAGCCTCGAACTCATCGCCGTAGACATCAGCCAGACCAGGGCACTCATTGGGGCACATTA 105843
Query 81203 GGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGG 81262
||||||| || |||| || ||||||||| ||||| ||||| || |||
Sbjct 105844 AAGTCCAGTCGCCGTTTCTCTCGACTCGCTTCATGAAGAGATCAGGAATCCAAAGAGCGA 105903
Query 81263 TGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAG 81321
||| || ||||| ||| || | ||||| | || ||||| || | || |||||
Sbjct 105904 GGAAAAGATCGCGAGCA-CGGACTTCCTCCTTGCCGTGGTTCTTACGGAGATCAAGAAAC 105962
Query 81322 TCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCGACG---- 81377
|| | || ||||| ||||||||||| || || | |||| | || | ||||
Sbjct 105963 TCGAAGACATCCGCGTGCCATGGCTCAAGGTAGATAGCGAAGGCACC---GGGACGCTTG 106019
Query 81378 --GCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATA 81435
||||||||| | |||||| | ||||| ||| || ||||||| ||| |||| ||
Sbjct 106020 TTGCCACCCTGATCGACGTATCTCGCAGTGTTGTTGAAGACACGCAGCATGGGGACAATG 106079
Query 81436 CCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCA--CCTTGCTGA 81493
|| | ||| |||||||| || | || || || | || || | | || |
Sbjct 106080 CCGTTTGATGTTCCGTTCGTGCCAGCAATGTAAGAACCAGTCGCACGAATGCGATGAACA 106139
Query 81494 TTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCAT 81553
||| || || |||||||||| | |||||| ||| ||||| |||| ||| ||||
Sbjct 106140 TTG--AGGCCAATGCCACCTGCCATCTTTGAGATCATGGCACAGGTCTTCAGGGTGTCAT 106197
Query 81554 AAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGC 81613
| || ||||||||||| || | |||||||| | || || ||| |||| | ||||
Sbjct 106198 AGATACCCTCGATGCTGTCCTCCTTCATGTCGACCAGAAAGCAGGAAGACAGTT--GGGC 106255
Query 81614 TTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACAT 81671
| ||| || |||||||| ||||| || | || || |||| || | | |||||
Sbjct 106256 CTGAGGAGTACCAGCATTGAAGAGTGTGGGAGATGCATGTGTGAAGTACTTGCTAGACAT 106315
Query 81672 CAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACG 81731
|||| || || || |||| | | | ||| || || ||||| | ||| |||||
Sbjct 106316 GAGGTTGTACGTCTCGATGACCCTTTCGACATCATCGCCCCAGATACCAACAGCAACACG 106375
Query 81732 CATAAACATGTACTGGGGC 81750
||||| ||| | ||| |||
Sbjct 106376 CATAATCATATGCTGCGGC 106394
>seq37
Length=2347807
Score = 187 bits (206), Expect = 3e-42
Identities = 178/228 (78%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||||||| || |||||||| ||||||||||||||||| || || ||||| |||||
Sbjct 2330879 AATGCAAATTTTCGTCAAGACCCTTACCGGCAAGACTATCACCCTAGAGGTCGAGTCGTC 2330820
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | || | ||| ||||| | || || ||||| |||||||| ||||||||||| ||
Sbjct 2330819 GGACACTATCGATAATGTGAAGTCGAAGATCCAGGATAAGGAGGGCATTCCTCCAGATCA 2330760
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|||||| || || |||||||| |||||||| ||||||| || ||||| | ||||| ||
Sbjct 2330759 GCAGCGCCTTATCTTTGCTGGCAAGCAACTTGAGGATGGCCGCACCCTTTCTGACTACAA 2330700
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || || ||| ||| ||||| || ||| | ||||| ||||||||
Sbjct 2330699 CATTCAGAAAGAAAGCACCCTTCACCTTGTCCTCCGTCTCCGCGGTGG 2330652
Score = 178 bits (196), Expect = 1e-39
Identities = 176/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || || || || || |||||||| ||||| || ||||| ||||| |
Sbjct 2331106 ATGCAGATCTTCGTTAAAACTCTCACTGGCAAGACCATTACCCTCGAGGTCGAGTCCTCT 2331047
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||||| || | ||| | || ||||| || |||||||| || || |||||||||
Sbjct 2331046 GATACCATTGACAACGTCAAGTCGAAGATTCAAGATAAGGAGGGTATCCCCCCAGACCAG 2330987
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| ||||| |||||||| |||||||| ||||||| || ||||| | ||||| ||
Sbjct 2330986 CAGCGCCTAATCTTTGCTGGCAAGCAACTTGAGGATGGCCGCACCCTTTCCGACTACAAC 2330927
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
| || || ||| ||| ||||| || ||| | ||||| |||||||||
Sbjct 2330926 ATTCAGAAAGAAAGCACACTTCACCTTGTCCTCCGTCTCCGCGGTGGA 2330879
Score = 147 bits (162), Expect = 2e-30
Identities = 147/191 (77%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || |||||||| ||||||||||||||||| || || || || |||||
Sbjct 2330650 ATGCAAATTTTCGTCAAGACCCTTACCGGCAAGACTATCACCCTAGAAGTCGAGTCGTCG 2330591
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | ||| ||||| | || |||||||| |||||||| |||||||| ||||||
Sbjct 2330590 GACACTATCGATAATGTGAAGTCGAAGATTCAGGATAAGGAGGGCATTCCTCCTGACCAG 2330531
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || |||||||| || ||||| || ||||| | || || || | ||||| ||
Sbjct 2330530 CAGCGCCTCATTTTTGCCGGAAAGCAGCTGGAGGACGGCCGCACTCTCTCTGACTACAAC 2330471
Query 27586 GTCCAAAAGGA 27596
|||| || ||
Sbjct 2330470 ATCCAGAAAGA 2330460
Score = 143 bits (158), Expect = 3e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || || || || ||||| ||||| || ||||| ||||| |||||
Sbjct 2331334 ATGCAGATCTTCGTGAAAACCCTCACCGGGAAGACCATCACTCTCGAGGTCGAGTCTTCC 2331275
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || | ||| | || || |||||||||||||| || || || || |||
Sbjct 2331274 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGATCAG 2331215
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || |||||||| |||||||||||||| | || || | | ||||| ||
Sbjct 2331214 CAGCGCCTTATCTTTGCTGGCAAGCAACTCGAGGACGGCCGCACTTTGTCGGACTACAAC 2331155
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||||||| || || || || || ||| | || ||||| |||||
Sbjct 2331154 ATTCAAAAGGAGTCGACCCTCCACCTTGTCCTTCGGCTTCGAGGTGG 2331108
>seq23
Length=3455761
Score = 149 bits (164), Expect = 7e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| || || ||||||||||| || |||||||| ||||| |
Sbjct 479582 ATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 479523
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| | ||| | || || ||||||||||| || || || || ||||||
Sbjct 479522 GACACCATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATCCCCCCGGACCAG 479463
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| | ||||| || || ||||| |||||||||| || || || | ||||| ||
Sbjct 479462 CAGCGATTGATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCTCCGACTACAAC 479403
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| ||| || ||||| || || | || || || ||
Sbjct 479402 ATCCAGAAGGAGAGCACCCTCCATCTCGTGCTGAGACTCCGTGGAGG 479356
>seq34
Length=2752027
Score = 134 bits (148), Expect = 2e-26
Identities = 139/182 (76%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473
||| || ||||| || || |||||||| || || |||||||| ||||| |||| |||
Sbjct 472413 CTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTGGAGTCTTCCGATACCAT 472472
Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533
| ||| | ||| | || || |||||||||||||| ||||| |||||||||||||| ||
Sbjct 472473 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAGCGCCT 472532
Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593
|| || ||||| ||||| || ||||||| ||||| || | ||||| || | || ||
Sbjct 472533 GATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGTACTCTTTCCGACTACAACATTCAGAA 472592
Query 27594 GG 27595
||
Sbjct 472593 GG 472594
>seq36
Length=2360352
Score = 125 bits (138), Expect = 8e-24
Identities = 208/298 (70%), Gaps = 2/298 (1%)
Strand=Plus/Plus
Query 31984 GACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCT-GTC 32042
||||| | |||||| ||||||||||| || || || ||| | ||| || || ||
Sbjct 587544 GACGGGTTTAAGCCTGGTCAGCGCAAGGTCATTTATGCTTGCTTGAAGCGAAATCTCGTA 587603
Query 32043 GAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCA 32102
|| |||| |||||| || || | || ||||| | ||||| || || ||||| ||
Sbjct 587604 AAG-GACAAGAAGGTCATTGAGTTGGCTGGTTACGTCTCTGAGCAGACTGCTTATCATCA 587662
Query 32103 CGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAA 32162
|||||| | || || ||| ||||| || | | || ||| ||||||| ||| | ||
Sbjct 587663 CGGCGAAGTATCCCTGCAGCAAACCATCATCGGCTTGGCACAGGACTTTGTTGGTTCCAA 587722
Query 32163 TAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGA 32222
||| | || | |||||||| ||| | || ||| |||| || ||||||||| ||
Sbjct 587723 CAACGTCAATTGTCTCGAGCCCAGTGGTAACTTCGGGTCCCGTCTAGCCGGTGGCTCTGA 587782
Query 32223 TGCTGCGAGCTCCCGTTACATCTTCACCCGTCTCGCACCTTCGACGCGCAAGATTTTC 32280
|||||| ||| | ||||||||| |||||||| | || | | |||||||| |||
Sbjct 587783 TGCTGCCAGCCCTCGTTACATCCATACCCGTCTATCTCCCTTTGCTCGCAAGATATTC 587840
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310136231440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |