Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04-
20] 37 sequences; 44,711,451 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq23 96.9 2e-15
seq37 84.2 1e-11
>seq23
Length=3455761
Score = 96.9 bits (106), Expect = 2e-15
Identities = 154/216 (71%), Gaps = 4/216 (2%)
Strand=Plus/Plus
Query 34494 CAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTC 34553
|| ||| | |||||| ||||||||||| || ||||| || || || || || || | ||
Sbjct 479370 CAGCACGAGATGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATC 479429
Query 34554 TTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613
|| || || || ||||| || || || ||||| |||||||| || | || ||||||||
Sbjct 479430 CTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCCGGGGGGATGCCTTCCTTGTC 479489
Query 34614 TGTGATCTTTTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCCACTTCCACGGTTATC 34671
|||| || | || || | ||| ||||| ||| |||||| || | ||| ||
Sbjct 479490 CTGGATC-TTGGACTTGACATTGTCAATGGTGTCGCTCG-ACTCCACCTCAAGGGTGATA 479547
Query 34672 GTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
|| || || || | || ||||| || |||||||||
Sbjct 479548 GTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATG 479583
>seq37
Length=2347807
Score = 84.2 bits (92), Expect = 1e-11
Identities = 164/240 (68%), Gaps = 2/240 (1%)
Strand=Plus/Plus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| |||| ||| || | || | ||||| || ||||||||||||||| || || ||
Sbjct 2331107 GCCACCTCGAAGCCGAAGGACAAGGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCCGA 2331166
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
| || || |||| || ||||| || || ||||| || | ||||| || || || ||
Sbjct 2331167 CAAAGTGCGGCCGTCCTCGAGTTGCTTGCCAGCAAAGATAAGGCGCTGCTGATCGGGGGG 2331226
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657
| ||||||||||| |||| || | || ||| | || ||||| ||| |
Sbjct 2331227 GATGCCCTCCTTGTCCTGGATC-TTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCGA 2331285
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGATTGTAT 34717
| || | || || || || ||||| | |||||||| || |||||||| | || ||||
Sbjct 2331286 CCTCGAGAGTGATGGTCTTCCCGGTGAGGGTTTTCACGAAGATCTGCATCTCTATGGTAT 2331345
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314729458076621
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |