Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq23 96.9 2e-15 seq37 84.2 1e-11 >seq23 Length=3455761 Score = 96.9 bits (106), Expect = 2e-15 Identities = 154/216 (71%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 34494 CAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTC 34553 || ||| | |||||| ||||||||||| || ||||| || || || || || || | || Sbjct 479370 CAGCACGAGATGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATC 479429 Query 34554 TTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613 || || || || ||||| || || || ||||| |||||||| || | || |||||||| Sbjct 479430 CTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCCGGGGGGATGCCTTCCTTGTC 479489 Query 34614 TGTGATCTTTTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCCACTTCCACGGTTATC 34671 |||| || | || || | ||| ||||| ||| |||||| || | ||| || Sbjct 479490 CTGGATC-TTGGACTTGACATTGTCAATGGTGTCGCTCG-ACTCCACCTCAAGGGTGATA 479547 Query 34672 GTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || || || | || ||||| || ||||||||| Sbjct 479548 GTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATG 479583 >seq37 Length=2347807 Score = 84.2 bits (92), Expect = 1e-11 Identities = 164/240 (68%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| |||| ||| || | || | ||||| || ||||||||||||||| || || || Sbjct 2331107 GCCACCTCGAAGCCGAAGGACAAGGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCCGA 2331166 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 | || || |||| || ||||| || || ||||| || | ||||| || || || || Sbjct 2331167 CAAAGTGCGGCCGTCCTCGAGTTGCTTGCCAGCAAAGATAAGGCGCTGCTGATCGGGGGG 2331226 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | ||||||||||| |||| || | || ||| | || ||||| ||| | Sbjct 2331227 GATGCCCTCCTTGTCCTGGATC-TTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCGA 2331285 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGATTGTAT 34717 | || | || || || || ||||| | |||||||| || |||||||| | || |||| Sbjct 2331286 CCTCGAGAGTGATGGTCTTCCCGGTGAGGGTTTTCACGAAGATCTGCATCTCTATGGTAT 2331345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729458076621