Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq34 95.1 1e-14 >seq34 Length=2752027 Score = 95.1 bits (104), Expect = 1e-14 Identities = 336/519 (65%), Gaps = 66/519 (13%) Strand=Plus/Plus Query 6563 TAGATATGCGCATCCCCCA--ACGTATGCACCAGCTCCCCAGGAACCAACCC-CACGACA 6619 |||| |||||||||||||| |||| | | |||||||| ||||||| | | ||| ||| Sbjct 1399902 TAGACATGCGCATCCCCCATGACGTGCGT-CAAGCTCCCC-GGAACCAGCTCGCAC-ACA 1399958 Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || || ||||| | || ||||| ||||| || ||||| ||||||||||| || | ||| Sbjct 1399959 TGCGCAATCATATGTGTAAGCAGCGCGTAGCTCGCAATATTGAACGGCACACCCAGGCCC 1400018 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAG---------------CTCCCCATTC 6724 || || | || | ||||| | |||||| ||| ||||||||| Sbjct 1400019 ATATCACAAGACCTCTGATACAACTGGCAATGCAGGTGTCCCTGTTTCTTCTCCCCATTT 1400078 Query 6725 GCG---------------------------------ACGTAGAATTG-GCAGAGGGTGTG 6750 || ||||| || || ||| | |||| Sbjct 1400079 GCCTCCCCTCCCGCACCCGCCGTCCTCGGATACGACACGTAAAACTGCGCAAACA-TGTG 1400137 Query 6751 GCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGATCCT 6810 || || || | ||||||| | ||| |||||||||||| | ||| | ||| | Sbjct 1400138 ACAAGGCGGCAACGCCATCTTCTTTAAATCGGCCGGGTTCCACGCACTCATGATGATGCG 1400197 Query 6811 TCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGC-AGCTGGTCCGCTCCCT 6869 | ||| | ||| | ||| | ||| ||| || | | || |||||||| | |||| Sbjct 1400198 CCGGTCGTACGGGCTGTTCTTGAGCTTGTGGATGACCT-CGGCGAGCTGGTCGACGCCCT 1400256 Query 6870 GTCCCGAATAGTCCGCTTCGCTCCCCCGA--TACTCCGCCCCAAAGTGTCTCCACTGGAA 6927 | |||| |||||| | |||| | ||| || || || || ||||| | ||| ||||| Sbjct 1400257 GGCCCGTATAGTCGG-TTCGG-CAGTCGACGTAGTCGGCGCCGAAGTGGCGCCATTGGAA 1400314 Query 6928 CCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGA-ACCCCCGC-TTGTCCAGA 6985 |||||||| || || | |||||| |||| || || || | |||||| ||||| || Sbjct 1400315 GCCGTAGACGGGCCCTAGGTCGCCGACCTCGCGG--TGCGATAGCCCCGCGTTGTCGAGG 1400372 Query 6986 AAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCC 7024 || || || || || | | ||||||||||||| || ||| Sbjct 1400373 AACTCGCGCGAGCCATTACCGTCCCAGATCTTGACGCCC 1400411 Score = 95.1 bits (104), Expect = 1e-14 Identities = 336/519 (65%), Gaps = 66/519 (13%) Strand=Plus/Minus Query 34321 GGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAA-GCGGGGGT-TC 34378 ||| || ||||||||||||| | | || || || || || || ||||| |||||| | || Sbjct 1400411 GGGCGTCAAGATCTGGGACGGTAATGGCTCGCGCGAGTTCCTCGACAACGCGGGGCTATC 1400352 Query 34379 CCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGG 34438 || || |||| |||||| | || || |||||||| ||||| ||| | ||||| || Sbjct 1400351 GCA--CCGCGAGGTCGGCGACCTAGGGCCCGTCTACGGCTTCCAATGGCGCCACTTCGGC 1400294 Query 34439 GCGGAGTA--TCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCT-GCAG 34495 || || || ||| | |||| | |||||| |||| ||||| | |||||||| || | Sbjct 1400293 GCCGACTACGTCGACTG-CCGAA-CCGACTATACGGGCCAGGGCGTCGACCAGCTCGCCG 1400236 Query 34496 TACGTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGG 34555 | || ||| ||| | ||| | ||| | ||| | | ||| | ||| | |||||| Sbjct 1400235 -AGGTCATCCACAAGCTCAAGAACAGCCCGTACGACCGGCGCATCATCATGAGTGCGTGG 1400177 Query 34556 AACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGC-CAATTCTA 34614 |||||| ||| | ||||||| | || || || |||| | ||| || || || Sbjct 1400176 AACCCGGCCGATTTAAAGAAGATGGCGTTGCCGCCTTGTCACA-TGTTTGCGCAGTTTTA 1400118 Query 34615 CGT---------------------------------CGCGAATGGGGAG----------- 34630 ||| || ||||||||| Sbjct 1400117 CGTGTCGTATCCGAGGACGGCGGGTGCGGGAGGGGAGGCAAATGGGGAGAAGAAACAGGG 1400058 Query 34631 ----CTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAA 34686 ||| |||||| | ||||| | || | || ||||| | || ||||||||||| Sbjct 1400057 ACACCTGCATTGCCAGTTGTATCAGAGGTCTTGTGATATGGGCCTGGGTGTGCCGTTCAA 1399998 Query 34687 CATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTCGTG-GGGTTGGTTCCTG 34745 ||||| || ||||| ||||| || | ||||| || ||||| ||| | | ||||||| | Sbjct 1399997 TATTGCGAGCTACGCGCTGCTTACACATATGATTGCGCATGT-GTGCGAGCTGGTTCC-G 1399940 Query 34746 GGGAGCTGGTGCATACGT--TGGGGGATGCGCATATCTA 34782 ||||||| | | |||| |||||||||||||| |||| Sbjct 1399939 GGGAGCTTG-ACGCACGTCATGGGGGATGCGCATGTCTA 1399902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448262192678640