Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04-
20] 37 sequences; 44,711,451 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq34 95.1 1e-14
>seq34
Length=2752027
Score = 95.1 bits (104), Expect = 1e-14
Identities = 336/519 (65%), Gaps = 66/519 (13%)
Strand=Plus/Plus
Query 6563 TAGATATGCGCATCCCCCA--ACGTATGCACCAGCTCCCCAGGAACCAACCC-CACGACA 6619
|||| |||||||||||||| |||| | | |||||||| ||||||| | | ||| |||
Sbjct 1399902 TAGACATGCGCATCCCCCATGACGTGCGT-CAAGCTCCCC-GGAACCAGCTCGCAC-ACA 1399958
Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679
|| || ||||| | || ||||| ||||| || ||||| ||||||||||| || | |||
Sbjct 1399959 TGCGCAATCATATGTGTAAGCAGCGCGTAGCTCGCAATATTGAACGGCACACCCAGGCCC 1400018
Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAG---------------CTCCCCATTC 6724
|| || | || | ||||| | |||||| ||| |||||||||
Sbjct 1400019 ATATCACAAGACCTCTGATACAACTGGCAATGCAGGTGTCCCTGTTTCTTCTCCCCATTT 1400078
Query 6725 GCG---------------------------------ACGTAGAATTG-GCAGAGGGTGTG 6750
|| ||||| || || ||| | ||||
Sbjct 1400079 GCCTCCCCTCCCGCACCCGCCGTCCTCGGATACGACACGTAAAACTGCGCAAACA-TGTG 1400137
Query 6751 GCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGATCCT 6810
|| || || | ||||||| | ||| |||||||||||| | ||| | ||| |
Sbjct 1400138 ACAAGGCGGCAACGCCATCTTCTTTAAATCGGCCGGGTTCCACGCACTCATGATGATGCG 1400197
Query 6811 TCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGC-AGCTGGTCCGCTCCCT 6869
| ||| | ||| | ||| | ||| ||| || | | || |||||||| | ||||
Sbjct 1400198 CCGGTCGTACGGGCTGTTCTTGAGCTTGTGGATGACCT-CGGCGAGCTGGTCGACGCCCT 1400256
Query 6870 GTCCCGAATAGTCCGCTTCGCTCCCCCGA--TACTCCGCCCCAAAGTGTCTCCACTGGAA 6927
| |||| |||||| | |||| | ||| || || || || ||||| | ||| |||||
Sbjct 1400257 GGCCCGTATAGTCGG-TTCGG-CAGTCGACGTAGTCGGCGCCGAAGTGGCGCCATTGGAA 1400314
Query 6928 CCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGA-ACCCCCGC-TTGTCCAGA 6985
|||||||| || || | |||||| |||| || || || | |||||| ||||| ||
Sbjct 1400315 GCCGTAGACGGGCCCTAGGTCGCCGACCTCGCGG--TGCGATAGCCCCGCGTTGTCGAGG 1400372
Query 6986 AAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCC 7024
|| || || || || | | ||||||||||||| || |||
Sbjct 1400373 AACTCGCGCGAGCCATTACCGTCCCAGATCTTGACGCCC 1400411
Score = 95.1 bits (104), Expect = 1e-14
Identities = 336/519 (65%), Gaps = 66/519 (13%)
Strand=Plus/Minus
Query 34321 GGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAA-GCGGGGGT-TC 34378
||| || ||||||||||||| | | || || || || || || ||||| |||||| | ||
Sbjct 1400411 GGGCGTCAAGATCTGGGACGGTAATGGCTCGCGCGAGTTCCTCGACAACGCGGGGCTATC 1400352
Query 34379 CCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGG 34438
|| || |||| |||||| | || || |||||||| ||||| ||| | ||||| ||
Sbjct 1400351 GCA--CCGCGAGGTCGGCGACCTAGGGCCCGTCTACGGCTTCCAATGGCGCCACTTCGGC 1400294
Query 34439 GCGGAGTA--TCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCT-GCAG 34495
|| || || ||| | |||| | |||||| |||| ||||| | |||||||| || |
Sbjct 1400293 GCCGACTACGTCGACTG-CCGAA-CCGACTATACGGGCCAGGGCGTCGACCAGCTCGCCG 1400236
Query 34496 TACGTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGG 34555
| || ||| ||| | ||| | ||| | ||| | | ||| | ||| | ||||||
Sbjct 1400235 -AGGTCATCCACAAGCTCAAGAACAGCCCGTACGACCGGCGCATCATCATGAGTGCGTGG 1400177
Query 34556 AACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGC-CAATTCTA 34614
|||||| ||| | ||||||| | || || || |||| | ||| || || ||
Sbjct 1400176 AACCCGGCCGATTTAAAGAAGATGGCGTTGCCGCCTTGTCACA-TGTTTGCGCAGTTTTA 1400118
Query 34615 CGT---------------------------------CGCGAATGGGGAG----------- 34630
||| || |||||||||
Sbjct 1400117 CGTGTCGTATCCGAGGACGGCGGGTGCGGGAGGGGAGGCAAATGGGGAGAAGAAACAGGG 1400058
Query 34631 ----CTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAA 34686
||| |||||| | ||||| | || | || ||||| | || |||||||||||
Sbjct 1400057 ACACCTGCATTGCCAGTTGTATCAGAGGTCTTGTGATATGGGCCTGGGTGTGCCGTTCAA 1399998
Query 34687 CATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTCGTG-GGGTTGGTTCCTG 34745
||||| || ||||| ||||| || | ||||| || ||||| ||| | | ||||||| |
Sbjct 1399997 TATTGCGAGCTACGCGCTGCTTACACATATGATTGCGCATGT-GTGCGAGCTGGTTCC-G 1399940
Query 34746 GGGAGCTGGTGCATACGT--TGGGGGATGCGCATATCTA 34782
||||||| | | |||| |||||||||||||| ||||
Sbjct 1399939 GGGAGCTTG-ACGCACGTCATGGGGGATGCGCATGTCTA 1399902
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448262192678640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |