Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04-
20] 37 sequences; 44,711,451 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq37 163 7e-35
seq23 138 3e-27
seq34 129 1e-24
seq17 87.8 4e-12
>seq37
Length=2347807
Score = 163 bits (180), Expect = 7e-35
Identities = 175/230 (76%), Gaps = 1/230 (0%)
Strand=Plus/Plus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||| | ||||||||||| || || ||||| ||||| ||||| || |||| | ||
Sbjct 2331114 CGAAGCCGAAGGACAAGGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCCGACAAAGTG 2331173
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| || || || || |||||||| || ||||||||||| || || || || || | ||
Sbjct 2331174 CGGCCGTCCTCGAGTTGCTTGCCAGCAAAGATAAGGCGCTGCTGATCGGGGGGGATGCCC 2331233
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
||||||||||||||||| || ||||| ||||||||||| || || |||||||||
Sbjct 2331234 TCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACCTCGAGA 2331293
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT-TTTATGGT 211122
||||| ||||| || ||||| || || || || | |||||| | ||||||
Sbjct 2331294 GTGATGGTCTTCCCGGTGAGGGTTTTCACGAAGATCTGCATCTCTATGGT 2331343
Score = 154 bits (170), Expect = 3e-32
Identities = 162/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|||||||||||||| ||| ||||| || ||||| || || | |||||| | |||||
Sbjct 2330667 AGGACAAGGTGAAGGGTGCTTTCTTTCTGAATGTTGTAGTCAGAAAGGGTGCGGCCATCC 2330726
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| || |||||||| || ||||||||||| || || || ||||||| || ||||| |||
Sbjct 2330727 TCAAGTTGCTTGCCAGCAAAGATAAGGCGCTGCTGATCTGGAGGAATGCCCTCCTTATCC 2330786
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||||| || ||||| ||||| || || ||||| || ||||| |||
Sbjct 2330787 TGGATCTTCGACTTCACATTATCGATAGTGTCCGACGACTCGACCTCTAGGGTGATAGTC 2330846
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
|| || || || ||||| || || | ||||||
Sbjct 2330847 TTGCCGGTAAGGGTCTTGACGAAAATTTGCATT 2330879
Score = 149 bits (164), Expect = 1e-30
Identities = 160/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|||||||||||||| ||| ||||| || ||||| || || | |||||| | |||||
Sbjct 2330895 AGGACAAGGTGAAGTGTGCTTTCTTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCATCC 2330954
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| || |||||||| || ||||| ||||| || ||||| || || | || ||||| ||
Sbjct 2330955 TCAAGTTGCTTGCCAGCAAAGATTAGGCGCTGCTGGTCTGGGGGGATACCCTCCTTATCT 2331014
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || ||||| || ||||| |||||| || |||||||| || || |||
Sbjct 2331015 TGAATCTTCGACTTGACGTTGTCAATGGTATCAGAGGACTCGACCTCGAGGGTAATGGTC 2331074
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || |||||||| || || || | ||||||
Sbjct 2331075 TTGCCAGTGAGAGTTTTAACGAAGATCTGCAT 2331106
Score = 131 bits (144), Expect = 4e-25
Identities = 164/225 (73%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949
|| ||| |||| || || | ||| || ||| |||||| |||||||| || || | ||
Sbjct 2330426 TCCACGCAGTCGGAGAACCAAGTGCAGGGTGCTCTCTTTCTGGATGTTGTAGTCAGAGAG 2330485
Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009
|| | || || ||||||||||| || || || || ||||| || |||||||||||||
Sbjct 2330486 AGTGCGGCCGTCCTCCAGCTGCTTTCCGGCAAAAATGAGGCGCTGCTGGTCAGGAGGAAT 2330545
Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069
|| ||||| ||||| ||||| ||||| || ||||| ||||| || || || ||
Sbjct 2330546 GCCCTCCTTATCCTGAATCTTCGACTTCACATTATCGATAGTGTCCGACGACTCGACTTC 2330605
Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| ||||| || || || ||||| || || | |||||
Sbjct 2330606 TAGGGTGATAGTCTTGCCGGTAAGGGTCTTGACGAAAATTTGCAT 2330650
>seq23
Length=3455761
Score = 138 bits (152), Expect = 3e-27
Identities = 168/228 (74%), Gaps = 6/228 (3%)
Strand=Plus/Plus
Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949
|| ||| ||||| || || || || || ||| ||| || |||||||| || || | ||
Sbjct 479358 TCCACGGAGTCTCAGCACGAGATGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAG 479417
Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009
|| | ||||| || ||||||||||| ||||| || | || || ||||| || || |
Sbjct 479418 AGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCCGGGGGGAT 479477
Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAAC 211066
|||||||||||||||||||| || || || || |||||||| ||| || ||
Sbjct 479478 GCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCAATGGTGTC---GCTCGACTCCAC 479534
Query 211067 CTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||| || ||||| ||||| |||||||| ||||| || || | ||||||
Sbjct 479535 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 479582
>seq34
Length=2752027
Score = 129 bits (142), Expect = 1e-24
Identities = 136/179 (76%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| || ||||| || || | ||| || | ||||| || ||||||||||| ||||||||
Sbjct 472592 TTCTGAATGTTGTAGTCGGAAAGAGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGATC 472533
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
||||| || ||||| || |||| || ||||||||||||||||| || || || |||
Sbjct 472532 AGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 472473
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105
||||| || || || ||||| || ||||| ||||| ||||| || ||||| || ||
Sbjct 472472 ATGGTATCGGAAGACTCCACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 472414
>seq17
Length=408792
Score = 87.8 bits (96), Expect = 4e-12
Identities = 182/264 (69%), Gaps = 13/264 (5%)
Strand=Plus/Plus
Query 178088 CCAAAGTTCTTTTGGTTGCTCTTTC---TGCAAATGGCATCTTTGTAC-GCAATGAAGGG 178143
|||| |||||| ||||||||||| | |||| || ||| ||||| ||| |||||
Sbjct 105633 CCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAG-TG--ATCCTTGTAGAGCATAAAAGGG 105689
Query 178144 CATTCCCAC-CTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAG 178202
|| ||| ||| | || ||| |||| ||| || ||| |||| |||||| || |
Sbjct 105690 --TTACCAGTCTCGGTCTGCGCCTCGAGGATGGCATACCAGAGCTTCTGGGCCTTGATCG 105747
Query 178203 TCTTTTTGGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCAT 178262
||| | | ||| || |||||| || | ||| || ||||||| || || |
Sbjct 105748 ACTT---GCCGCGTCCCTCGGCCTCGTATTTCTCGTACAGAGCCTCGAACTCATCGCCGT 105804
Query 178263 AGACATCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCT 178322
|||||||| | ||||| || |||||||||||| | | | |||| | |||| | ||
Sbjct 105805 AGACATCAGCCAGACCAGGGCACTCATTGGGGCACATTAAAGTCCAGTCGCCGTTTCTCT 105864
Query 178323 TCACTCGTTTCATGAAGAGGTCAG 178346
||||| ||||||||||| ||||
Sbjct 105865 CGACTCGCTTCATGAAGAGATCAG 105888
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151450489505
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |