Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04-
20] 37 sequences; 44,711,451 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq37 107 1e-18
seq23 93.3 3e-14
>seq37
Length=2347807
Score = 107 bits (118), Expect = 1e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| ||||||||||| || || || ||||||||||| || || || |
Sbjct 2331334 ATGCAGATCTTCGTGAAAACCCTCACCGGGAAGACCATCACTCTCGAGGTCGAGTCTTCC 2331275
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | || | | || || || ||||| || || | || || |||||
Sbjct 2331274 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGATCAG 2331215
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||||| | || ||||| ||||| ||||| || |||| |||||||| || ||||||
Sbjct 2331214 CAGCGCCTTATCTTTGCTGGCAAGCAACTCGAGGACGGCCGCACTTTGTCGGACTACAAC 2331155
Query 23791 ATACAAAAAGAGTCCAC 23807
|| ||||| ||||| ||
Sbjct 2331154 ATTCAAAAGGAGTCGAC 2331138
Score = 96.9 bits (106), Expect = 2e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||||||||| ||||| || || || || || ||||| || || ||| |
Sbjct 2331106 ATGCAGATCTTCGTTAAAACTCTCACTGGCAAGACCATTACCCTCGAGGTCGAGTCCTCT 2331047
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|| || |||| | | || || ||| || || || ||| | || ||||| ||
Sbjct 2331046 GATACCATTGACAACGTCAAGTCGAAGATTCAAGATAAGGAGGGTATCCCCCCAGACCAG 2330987
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||||| |||| ||||| ||||| ||||| || || | ||||| | ||| ||||||
Sbjct 2330986 CAGCGCCTAATCTTTGCTGGCAAGCAACTTGAGGATGGCCGCACCCTTTCCGACTACAAC 2330927
Query 23791 ATACAAAAAGA 23801
|| || |||||
Sbjct 2330926 ATTCAGAAAGA 2330916
>seq23
Length=3455761
Score = 93.3 bits (102), Expect = 3e-14
Identities = 138/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||||||||||| || || ||||| || || || || || |
Sbjct 479582 ATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 479523
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | || || ||||| ||||| | || || || ||
Sbjct 479522 GACACCATTGACAATGTCAAGTC-CAAGATCCAGGACAAGGAAGGCATCCCCCCGGACCA 479464
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||| || || || |||||||| || || || || | |||||| | ||| |||||
Sbjct 479463 GCAGCGATTGATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCTCCGACTACAA 479404
Query 23790 CATACAAAAAGAG 23802
||| || || |||
Sbjct 479403 CATCCAGAAGGAG 479391
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338009447578796
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |