Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04-
20] 37 sequences; 44,711,451 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq37 136 9e-27
seq23 125 2e-23
seq34 122 2e-22
>seq37
Length=2347807
Score = 136 bits (150), Expect = 9e-27
Identities = 169/230 (73%), Gaps = 1/230 (0%)
Strand=Plus/Plus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
||||| | |||||||||||||| || || || ||||| | ||||| || | ||||||
Sbjct 2331114 CGAAGCCGAAGGACAAGGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCCGACAAAGTG 2331173
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| || || || || ||||| ||||| |||||||| || || || ||||| || || ||
Sbjct 2331174 CGGCCGTCCTCGAGTTGCTTGCCAGCAAAGATAAGGCGCTGCTGATCGGGGGGGATGCCC 2331233
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
|||||||| |||||||| ||| || ||||||||||| || | || || || |
Sbjct 2331234 TCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACCTCGAGA 2331293
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT-TTTATGGT 225721
||||| ||||| || || | ||||| | ||| | ||||| | ||||||
Sbjct 2331294 GTGATGGTCTTCCCGGTGAGGGTTTTCACGAAGATCTGCATCTCTATGGT 2331343
Score = 127 bits (140), Expect = 5e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||||||||| || ||| |||||| || | ||||| || | | || | |||||
Sbjct 2330667 AGGACAAGGTGAAGGGTGCTTTCTTTCTGAATGTTGTAGTCAGAAAGGGTGCGGCCATCC 2330726
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || ||||| ||||| |||||||| || || || || || ||||| || ||||| ||
Sbjct 2330727 TCAAGTTGCTTGCCAGCAAAGATAAGGCGCTGCTGATCTGGAGGAATGCCCTCCTTATCC 2330786
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||||||| ||||| ||||| || | || || |||| ||||| |||
Sbjct 2330787 TGGATCTTCGACTTCACATTATCGATAGTGTCCGACGACTCGACCTCTAGGGTGATAGTC 2330846
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714
||||| || | || || | ||| | |||||||
Sbjct 2330847 TTGCCGGTAAGGGTCTTGACGAAAATTTGCATT 2330879
Score = 116 bits (128), Expect = 9e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||||||||| || ||| |||||| || | ||||| |||| | || | |||||
Sbjct 2330895 AGGACAAGGTGAAGTGTGCTTTCTTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCATCC 2330954
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || ||||| ||||| ||||| || || || ||||| || || ||||| ||||| |||
Sbjct 2330955 TCAAGTTGCTTGCCAGCAAAGATTAGGCGCTGCTGGTCTGGGGGGATACCCTCCTTATCT 2331014
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| ||||| ||| || || ||||| || |||| || || || | || || |||
Sbjct 2331015 TGAATCTTCGACTTGACGTTGTCAATGGTATCAGAGGACTCGACCTCGAGGGTAATGGTC 2331074
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || | |||||| | ||| | |||||
Sbjct 2331075 TTGCCAGTGAGAGTTTTAACGAAGATCTGCAT 2331106
>seq23
Length=3455761
Score = 125 bits (138), Expect = 2e-23
Identities = 161/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| |||||||| || || ||||| ||| || || |||| ||||| |||| | |||
Sbjct 479361 ACGGAGTCTCAGCACGAGATGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGT 479420
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || |||||||| || ||||| || | ||| || ||||| || || || ||
Sbjct 479421 GCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCCGGGGGGATGCC 479480
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||||||| |||||||| ||| ||| || |||||||| | ||||| || |
Sbjct 479481 TTCCTTGTCCTGGATCTTGGACTTGACATTGTCAATGGTGTCGCTCGACTCCACCTCAAG 479540
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| ||||||||||| | || || | ||| | |||||
Sbjct 479541 GGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 479582
>seq34
Length=2752027
Score = 122 bits (134), Expect = 2e-22
Identities = 129/170 (76%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 225535 TTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGT 225594
||||| |||| | ||| | ||||| || |||||||| ||||||||||| || || ||
Sbjct 472583 TTGTAGTCGGAAAGAGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGC 472524
Query 225595 TGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCT 225654
||||| || ||||| || |||||||| |||||||| ||| ||| |||||||| ||
Sbjct 472523 TGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTATCG 472464
Query 225655 GAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704
|| | ||||| || | ||||| ||||||||||||| || || | |||
Sbjct 472463 GAAGACTCCACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 472414
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192530634665678
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |