Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq23 129 1e-24 seq34 91.5 3e-13 seq37 86.0 1e-11 >seq23 Length=3455761 Score = 129 bits (142), Expect = 1e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 |||||| || || ||||| || || ||| || ||||||||||| |||| | ||| | Sbjct 479364 GAGTCTCAGCACGAGATGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCG 479423 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || |||||||| || | | ||||||||||| | ||| ||||| Sbjct 479424 GCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCCGGGGGGATGCCTTC 479483 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || |||||| | || | | |||| ||| || ||||| || Sbjct 479484 CTTGTCCTGGATCTTGGACTTGACATTGTCAATGGTGTCGCTCGACTCCACCTCAAGGGT 479543 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||||||||| ||||||||||||| |||||| Sbjct 479544 GATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 479582 >seq34 Length=2752027 Score = 91.5 bits (100), Expect = 3e-13 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976 || || |||||||| |||| | ||| | ||||| || || || || |||||||| Sbjct 472592 TTCTGAATGTTGTAGTCGGAAAGAGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGATC 472533 Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036 || | ||||||||| | | || || ||||| || || || || |||||| | || Sbjct 472532 AGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 472473 Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096 | | | || ||| ||| || ||||| || || || |||||||| || |||||||||||| Sbjct 472472 ATGGTATCGGAAGACTCCACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAG 472413 >seq37 Length=2347807 Score = 86.0 bits (94), Expect = 1e-11 Identities = 152/220 (69%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||| ||| || | || || || |||||| ||||||||||| || | | ||| | Sbjct 2330433 AGTCGGAGAACCAAGTGCAGGGTGCTCTCTTTCTGGATGTTGTAGTCAGAGAGAGTGCGG 2330492 Query 151947 CCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTT 152004 || || || || ||||| ||||| || || || | ||||||||| | | || || | Sbjct 2330493 CCGTCCTCCAGCTGCTTT--CCGGCAAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCT 2330550 Query 152005 CCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAG 152064 |||| || ||||| || || ||| | || | |||| || ||| ||||| || | Sbjct 2330551 CCTTATCCTGAATCTTCGACTTCACATTATCGATAGTGTCCGACGACTCGACTTCTAGGG 2330610 Query 152065 TAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| ||||| || || ||||| ||||| | ||||| Sbjct 2330611 TGATAGTCTTGCCGGTAAGGGTCTTGACGAAAATTTGCAT 2330650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820253016827