Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04-
20] 37 sequences; 44,711,451 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq23 163 2e-35
seq37 131 1e-25
seq34 102 6e-17
>seq23
Length=3455761
Score = 163 bits (180), Expect = 2e-35
Identities = 170/221 (77%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
||||||| ||| || || || ||||||||||| ||||||||||| |||| ||| |||
Sbjct 479365 AGTCTCAGCACGAGATGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGG 479424
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
| || || |||||||| ||||| || ||||| |||||||| || | || | ||||||
Sbjct 479425 CCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCCGGGGGGATGCCTTCC 479484
Query 44240 TTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCG 44297
|| ||| ||||| ||| || ||| | ||||||||| || |||||||| | |
Sbjct 479485 TTGTCCTGGATCTTGGACTTGACATTGT--CAATGGTGTCGCTCGACTCCACCTCAAGGG 479542
Query 44298 TAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
| || ||||| ||||||||||||||||||||||| ||||||
Sbjct 479543 TGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATG 479583
>seq37
Length=2347807
Score = 131 bits (144), Expect = 1e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || | ||||| | |||| ||| || |||||||| || ||||||||||| || | |
Sbjct 2330424 CCTCCACGCAGTCGGAGAACCAAGTGCAGGGTGCTCTCTTTCTGGATGTTGTAGTCAGAG 2330483
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| ||| |||| ||||||||||| |||||||| || | |||||||| || | |||
Sbjct 2330484 AGAGTGCGGCCGTCCTCCAGCTGCTTTCCGGCAAAAATGAGGCGCTGCTGGTCAGGAGGA 2330543
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290
| || ||||| ||| |||||| ||||| | | || ||||| | || || ||
Sbjct 2330544 ATGCCCTCCTTATCCTGAATCTTCGACTTCACATTATCGATAGTGTCCGACGACTCGACT 2330603
Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| | || || ||||| || || |||||||| ||||| ||||||||
Sbjct 2330604 TCTAGGGTGATAGTCTTGCCGGTAAGGGTCTTGACGAAAATTTGCAT 2330650
Score = 120 bits (132), Expect = 2e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| |||||||| ||||| || || || |||||||| || | || ||| | || ||
Sbjct 2330670 ACAAGGTGAAGGGTGCTTTCTTTCTGAATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCA 2330729
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| ||||| || |||||||| | ||||||||||||| ||| | || ||||| |||
Sbjct 2330730 AGTTGCTTGCCAGCAAAGATAAGGCGCTGCTGATCTGGAGGAATGCCCTCCTTATCCTGG 2330789
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
|||||| ||||| | | || ||||| | || || ||||| | || || |||||
Sbjct 2330790 ATCTTCGACTTCACATTATCGATAGTGTCCGACGACTCGACCTCTAGGGTGATAGTCTTG 2330849
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || |||||||| ||||| ||||||||
Sbjct 2330850 CCGGTAAGGGTCTTGACGAAAATTTGCAT 2330878
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || || ||||||||| |||||||| || | | ||| |||| ||
Sbjct 2331126 ACAAGGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCCGACAAAGTGCGGCCGTCCTCG 2331185
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| ||||| || |||||||| | ||||||||||| | || | || ||||| |||
Sbjct 2331186 AGTTGCTTGCCAGCAAAGATAAGGCGCTGCTGATCGGGGGGGATGCCCTCCTTGTCCTGG 2331245
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | |||||||||| || || ||||| | || || |||||
Sbjct 2331246 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACCTCGAGAGTGATGGTCTTC 2331305
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| |||||||| ||||||||||| |||||
Sbjct 2331306 CCGGTGAGGGTTTTCACGAAGATCTGCAT 2331334
>seq34
Length=2752027
Score = 102 bits (112), Expect = 6e-17
Identities = 134/184 (73%), Gaps = 4/184 (2%)
Strand=Plus/Minus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
|||| || |||||||| |||| || || | || || |||||||| || || ||||
Sbjct 472594 CCTTCTGAATGTTGTAGTCGGAAAGAGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGA 472535
Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265
||| |||||||| |||| || | || ||||| ||| ||||| ||| || |||
Sbjct 472534 TCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 472475
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| ||||| |||| || |||||||| | || || ||||| ||||| |||||||||||
Sbjct 472474 --CGATGGTATCGGAAGACTCCACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCAC 472417
Query 44326 GAAG 44329
||||
Sbjct 472416 GAAG 472413
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990237666829
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |