Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04-
20] 37 sequences; 44,711,451 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq23 152 1e-31
seq37 138 3e-27
seq17 89.7 1e-12
>seq23
Length=3455761
Score = 152 bits (168), Expect = 1e-31
Identities = 166/219 (76%), Gaps = 6/219 (3%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980
|| || |||||||| || ||||| || || || |||||||| |||||||| |||
Sbjct 479579 CAGATCTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC--- 479523
Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040
|||||||| || || ||||| ||||| |||||||| ||||| ||||| |||||||||
Sbjct 479522 GACACCATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATCCCCCCGGACCAG 479463
Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100
|| ||| | || |||||||| || |||||||| ||||| | ||||| |||| || |||
Sbjct 479462 CAGCGATTGATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCTCCGACTACAAC 479403
Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139
|||| || || || || ||||| || ||||||||
Sbjct 479402 ATCCAGAAGGAGAGCACCCTCCATCTCGTGCTGAGACTC 479364
>seq37
Length=2347807
Score = 138 bits (152), Expect = 3e-27
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| ||||||||||| || || || || ||||||||||| || ||| ||
Sbjct 2331103 CAGATCTTCGTTAAAACTCTCACTGGCAAGACCATTACCCTCGAGGTCGAGTCCTCTGAT 2331044
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || |||||||| |||||||| || || || || ||||| || ||||||||
Sbjct 2331043 ACCATTGACAACGTCAAGTCGAAGATTCAAGATAAGGAGGGTATCCCCCCAGACCAGCAG 2330984
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || || || || || || ||||| | || ||| |||| || ||| |
Sbjct 2330983 CGCCTAATCTTTGCTGGCAAGCAACTTGAGGATGGCCGCACCCTTTCCGACTACAACATT 2330924
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| |||||| ||||| || |||||
Sbjct 2330923 CAGAAAGAAAGCACACTTCACCTTGT 2330898
Score = 138 bits (152), Expect = 3e-27
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||||||||| ||||| || || || ||||| |||||||| || || |||
Sbjct 2331331 CAGATCTTCGTGAAAACCCTCACCGGGAAGACCATCACTCTCGAGGTCGAGTCTTCCGAC 2331272
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||| |||||||| || || ||||| || || |||||
Sbjct 2331271 ACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGATCAGCAG 2331212
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| |||||||| || || || || ||||| || || | ||| | | || || ||| |
Sbjct 2331211 CGCCTTATCTTTGCTGGCAAGCAACTCGAGGACGGCCGCACTTTGTCGGACTACAACATT 2331152
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
||||| || || || || || |||||
Sbjct 2331151 CAAAAGGAGTCGACCCTCCACCTTGT 2331126
Score = 120 bits (132), Expect = 7e-22
Identities = 152/208 (73%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || || || || || || || |||||||| || || || || |||
Sbjct 2330647 CAAATTTTCGTCAAGACCCTTACCGGCAAGACTATCACCCTAGAAGTCGAGTCGTCGGAC 2330588
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || || || ||||||||||| || || || || ||||| ||||||||
Sbjct 2330587 ACTATCGATAATGTGAAGTCGAAGATTCAGGATAAGGAGGGCATTCCTCCTGACCAGCAG 2330528
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || || |||||||| ||||| || || || | ||||| | || || ||| ||
Sbjct 2330527 CGCCTCATTTTTGCCGGAAAGCAGCTGGAGGACGGCCGCACTCTCTCTGACTACAACATC 2330468
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131
|| ||||| || ||||| |||| ||
Sbjct 2330467 CAGAAAGAGAGCACCCTGCA-CTTGGTT 2330441
Score = 114 bits (126), Expect = 3e-20
Identities = 149/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || || || || || || || |||||||| ||||| || || |||
Sbjct 2330875 CAAATTTTCGTCAAGACCCTTACCGGCAAGACTATCACCCTAGAGGTCGAGTCGTCGGAC 2330816
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || || || ||||| ||||| || || || || ||||| || |||||
Sbjct 2330815 ACTATCGATAATGTGAAGTCGAAGATCCAGGATAAGGAGGGCATTCCTCCAGATCAGCAG 2330756
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| |||||||| || || || || || || ||||| | || ||| | || || ||| |
Sbjct 2330755 CGCCTTATCTTTGCTGGCAAGCAACTTGAGGATGGCCGCACCCTTTCTGACTACAACATT 2330696
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| |||||| || || || |||||
Sbjct 2330695 CAGAAAGAAAGCACCCTTCACCTTGT 2330670
>seq17
Length=408792
Score = 89.7 bits (98), Expect = 1e-12
Identities = 183/268 (68%), Gaps = 7/268 (3%)
Strand=Plus/Plus
Query 214123 CCAAAGTTTTTCTGGTTGCTTTTGCGGCAAATGGCATCTTTGTATGCGATGAAAGGCATT 214182
|||| ||| ||||||||||| |||||| | ||| ||||| || ||||| |
Sbjct 105633 CCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATAAAAGGGTTA 105692
Query 214183 CCCACCTCGACTTGAGCGACAAGAATGTGATGCCAGAGTTCTTGGGCCTTCA-CGACCTT 214241
|| |||| || || | || ||| || |||||| | |||||||| | ||||
Sbjct 105693 CCAGTCTCGGTCTGCGCCTCGAGGATGGCATACCAGAGCTTCTGGGCCTTGATCGAC--- 105749
Query 214242 TTTGGCTCTTCCCTCGTTTTCGTACTTTTCATAAAGAGACTCAAATTCCGAACCGTAGAC 214301
||| | | ||||||| ||||| || || || |||| ||| || || ||||||||
Sbjct 105750 -TTGCCGCGTCCCTCGGCCTCGTATTTCTCGTACAGAGCCTCGAACTCATCGCCGTAGAC 105808
Query 214302 ATCATCAAGACCGGGAGCCTCGTTGGGGCAGAAAAGACTCCATTGTCCATTATCCCT-GA 214360
|||| | ||||| || ||| |||||||| | | | |||| | || || || || ||
Sbjct 105809 ATCAGCCAGACCAGGGCACTCATTGGGGCACATTAAAGTCCAGTCGCCGTT-TCTCTCGA 105867
Query 214361 CTCTTTTCATGAAAAGGTCGGAAGTCCA 214388
||| |||||||| || || | | ||||
Sbjct 105868 CTCGCTTCATGAAGAGATCAGGAATCCA 105895
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203730629356178
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |