Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04-
20] 37 sequences; 44,711,451 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq23 172 5e-38
seq37 129 5e-25
seq34 127 2e-24
>seq23
Length=3455761
Score = 172 bits (190), Expect = 5e-38
Identities = 167/212 (79%), Gaps = 2/212 (1%)
Strand=Plus/Plus
Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712
||| ||||| || |||||||||||||| ||||| ||||||||||| ||||| | || ||
Sbjct 479373 CACGAGATGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCCTC 479432
Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772
|||||||||||||||||| |||| ||||| ||||||| ||| | || |||||||||
Sbjct 479433 GAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTG 479492
Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831
||| || ||| || | | | |||||||||||||||||||| | || || || |
Sbjct 479493 GATCTTGGACTT-GACATTGTCAATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCT 479551
Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
| ||||| || ||||| ||||| |||||||||
Sbjct 479552 TGCCCGTGAGGGTCTTCACGAAGATCTGCATG 479583
>seq37
Length=2347807
Score = 129 bits (142), Expect = 5e-25
Identities = 168/229 (73%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| ||||| ||||| | || || || || ||||| || ||||||||||| ||||| ||
Sbjct 2330652 CCACCGCGGAGACGGAGGACAAGGTGAAGGGTGCTTTCTTTCTGAATGTTGTAGTCAGAA 2330711
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| | || || || |||||||| || || || |||||||| || || | |||
Sbjct 2330712 AGGGTGCGGCCATCCTCAAGTTGCTTGCCAGCAAAGATAAGGCGCTGCTGATCTGGAGGA 2330771
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCA-ACGA-CGACACAGTGTCGCTCGACTCCA 41813
| || |||||| ||| ||| || ||||| | | || | |||||| |||||| |
Sbjct 2330772 ATGCCCTCCTTATCCTGGATCTTCGACTTCACATTATCG--ATAGTGTCCGACGACTCGA 2330829
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| | || || || || || || || ||||| |||||||| |||||
Sbjct 2330830 CCTCTAGGGTGATAGTCTTGCCGGTAAGGGTCTTGACGAAAATTTGCAT 2330878
Score = 113 bits (124), Expect = 4e-20
Identities = 164/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| ||||| ||||| | || || || || ||||| || ||||||||||| ||||||||
Sbjct 2330880 CCACCGCGGAGACGGAGGACAAGGTGAAGTGTGCTTTCTTTCTGAATGTTGTAGTCGGAA 2330939
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| | || || || |||||||| || || || |||||||| ||||| | |||
Sbjct 2330940 AGGGTGCGGCCATCCTCAAGTTGCTTGCCAGCAAAGATTAGGCGCTGCTGGTCTGGGGGG 2330999
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | |||||| | | ||| | || | | ||| | | | || || ||||| ||
Sbjct 2331000 ATACCCTCCTTAT-CTTGAATCTTCGACTTGACGTTGTCAATGGTATCAGAGGACTCGAC 2331058
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
||| | || || || || || || || || || ||||| |||||||||
Sbjct 2331059 CTCGAGGGTAATGGTCTTGCCAGTGAGAGTTTTAACGAAGATCTGCATG 2331107
>seq34
Length=2752027
Score = 127 bits (140), Expect = 2e-24
Identities = 139/183 (76%), Gaps = 4/183 (2%)
Strand=Plus/Minus
Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732
||||||||||||| |||||||| || || || | || || ||||||||||| ||||| |
Sbjct 472594 CCTTCTGAATGTTGTAGTCGGAAAGAGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGA 472535
Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGA 41790
|||||||||| ||||| | ||||| || |||||||||| ||| || ||| || |
Sbjct 472534 TCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 472475
Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850
|| | || ||| ||||||||||| | || || || || |||||||| ||||| ||
Sbjct 472474 CG--ATGGTATCGGAAGACTCCACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCAC 472417
Query 41851 GAA 41853
|||
Sbjct 472416 GAA 472414
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303786184400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |