Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq18 116 8e-21
>seq18
Length=888533
Score = 116 bits (128), Expect = 8e-21
Identities = 161/223 (72%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 230416 GAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGCTGAACTTATGGG 230474
|||||| | | || ||| | || || ||| ||| |||| |||||||| |||||| |
Sbjct 234545 GAGTTCTTGAGCGAGGCTCTCCCCTG-CGCACTTCTTGGTATGAACGCCACCCTTATGTG 234487
Query 230475 ACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTA 230534
|||||||| || ||||| ||||| ||| | | | || || || || || || ||
Sbjct 234486 CCAGTACATTGAGTTCGTTGCCGATCGCCTGCTGTTGGCTCTCGGCAACACCAAGGTCTA 234427
Query 230535 CAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTT 230594
||| | | |||||||| | || |||||| ||| ||||| || |||||||||||
Sbjct 234426 CAATGCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTAGCTGGCAAGACCAACTT 234367
Query 230595 CTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637
|||||| |||||||| |||| || |||| | ||||||| |||
Sbjct 234366 CTTCGAGAAGCGTGTTGGTGATTACCAGAAGGCTGGTGTCATG 234324
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057823064817470
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |