Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016- 05-18] 69 sequences; 38,501,010 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq18 116 8e-21 >seq18 Length=888533 Score = 116 bits (128), Expect = 8e-21 Identities = 161/223 (72%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 230416 GAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGCTGAACTTATGGG 230474 |||||| | | || ||| | || || ||| ||| |||| |||||||| |||||| | Sbjct 234545 GAGTTCTTGAGCGAGGCTCTCCCCTG-CGCACTTCTTGGTATGAACGCCACCCTTATGTG 234487 Query 230475 ACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTA 230534 |||||||| || ||||| ||||| ||| | | | || || || || || || || Sbjct 234486 CCAGTACATTGAGTTCGTTGCCGATCGCCTGCTGTTGGCTCTCGGCAACACCAAGGTCTA 234427 Query 230535 CAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTT 230594 ||| | | |||||||| | || |||||| ||| ||||| || ||||||||||| Sbjct 234426 CAATGCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTAGCTGGCAAGACCAACTT 234367 Query 230595 CTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 |||||| |||||||| |||| || |||| | ||||||| ||| Sbjct 234366 CTTCGAGAAGCGTGTTGGTGATTACCAGAAGGCTGGTGTCATG 234324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823064817470