Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016- 05-18] 69 sequences; 38,501,010 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq18 91.5 2e-13 >seq18 Length=888533 Score = 91.5 bits (100), Expect = 2e-13 Identities = 175/255 (69%), Gaps = 5/255 (2%) Strand=Plus/Plus Query 16502 TCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATT 16561 || ||||| |||||||| || ||||| || || ||||||||||| ||||| | ||| Sbjct 234976 TCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGTGCCTCGGGGATT 235035 Query 16562 TGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCA 16621 |||||||| || |||| || || | |||||||| || || || ||||| ||||| Sbjct 235036 TGTACTTCGCCGGAAAAGCGCTCGACGAGGTTCTCGTTGACAATGCCGTCGGAGGCAGCG 235095 Query 16622 AAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGT--AA--GAATATGCCA 16677 || || || | | ||| ||||| | ||||| | || || | | | ||| Sbjct 235096 AAGAAGGCGAGGACGTGGGAGATGAAGAAGCGCTCGTC-GTCGTTCAATCGCTTGTTCCA 235154 Query 16678 ATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTT 16737 || | | ||| ||||| | ||| | ||| || | ||||| ||| |||| | ||||| Sbjct 235155 GTCATGGAGATCCTTGGAAAGATCAATTTCCTCAGCAGTCCAGAAGGAAGCCTCGGCCTT 235214 Query 16738 TTTATACATTTTCCA 16752 || ||||||| ||| Sbjct 235215 CTTGTACATTTGCCA 235229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511413958905080