Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq18 91.5 2e-13
>seq18
Length=888533
Score = 91.5 bits (100), Expect = 2e-13
Identities = 175/255 (69%), Gaps = 5/255 (2%)
Strand=Plus/Plus
Query 16502 TCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATT 16561
|| ||||| |||||||| || ||||| || || ||||||||||| ||||| | |||
Sbjct 234976 TCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGTGCCTCGGGGATT 235035
Query 16562 TGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCA 16621
|||||||| || |||| || || | |||||||| || || || ||||| |||||
Sbjct 235036 TGTACTTCGCCGGAAAAGCGCTCGACGAGGTTCTCGTTGACAATGCCGTCGGAGGCAGCG 235095
Query 16622 AAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGT--AA--GAATATGCCA 16677
|| || || | | ||| ||||| | ||||| | || || | | | |||
Sbjct 235096 AAGAAGGCGAGGACGTGGGAGATGAAGAAGCGCTCGTC-GTCGTTCAATCGCTTGTTCCA 235154
Query 16678 ATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTT 16737
|| | | ||| ||||| | ||| | ||| || | ||||| ||| |||| | |||||
Sbjct 235155 GTCATGGAGATCCTTGGAAAGATCAATTTCCTCAGCAGTCCAGAAGGAAGCCTCGGCCTT 235214
Query 16738 TTTATACATTTTCCA 16752
|| ||||||| |||
Sbjct 235215 CTTGTACATTTGCCA 235229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511413958905080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |