Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016- 05-18] 69 sequences; 38,501,010 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq15 129 7e-25 >seq15 Length=938269 Score = 129 bits (142), Expect = 7e-25 Identities = 438/678 (65%), Gaps = 51/678 (8%) Strand=Plus/Plus Query 145545 CATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCCGCCCT 145604 ||||| ||| | || |||| || || | || ||| | | | |||| ||||| ||| | Sbjct 299005 CATCTTCATCGCAATCCCCGCATGCGGCTTATACCCCACGACCTCAAACTCCTCAGCCGT 299064 Query 145605 GAAGTCATCTATG-TCCTCC--ACCCGCCTCAGGATCCTGAGCCTGGGAAAGGGCCGGGG 145661 | |||| ||| ||| || || |||| ||| | ||| | ||||| || || Sbjct 299065 CCACCCATCAATGCTCCCCCCAACATCCCTCTTGATATTCAGCGTCGGAAACTCGCGCGG 299124 Query 145662 GCTCCTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCC 145720 ||| | || | ||| | |||||| | || || |||| || || ||||| || | Sbjct 299125 -CTCACGCTCCAACTGCACCTTCAGCGCGTCGACATGGTCCGCATACACATGCGCATCGC 299183 Query 145721 CCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCA 145780 ||| | ||| |||| |||||||| | | | | || || | ||||| || | Sbjct 299184 CCATGGTGTGTGTGAACGTGCCGGGCTCCAAGTCGCATACATGAGCCAGCATGTGCGTTA 299243 Query 145781 GCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGT 145840 | || ||||||||| |||||||| ||||| |||||||||||||| | ||| ||||| | Sbjct 299244 ATAAGGCGTAGCTGGCAATGTTGAACGGCACGCCCAGCCCCATGTCGCACGACCGCTGAT 299303 Query 145841 ACAGCTG-----GCAGGA-------GAGCTCCC-CGCC-CGCC----------------- 145869 | ||| | ||| | | ||| | |||| |||| Sbjct 299304 ATAGCAGCGAGTGCAATACGCCTCTGGGCTTCTGCGCCTCGCCCTCGCGCTGTCGCGGAA 299363 Query 145870 -----ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCG 145924 |||||||||||| | | |||||| || ||||||||||| ||| |||| Sbjct 299364 ACGAGACGTAGAACTGGGCAAACATGTGGCAAGGGGGCAGGGCCATTTTCTTCAGATCCG 299423 Query 145925 CCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCG---GGGTTCCTCTTGATCTCCC 145981 | |||||||| || | || | || |||||| ||| || || || | | || Sbjct 299424 CGGGGTTCCATGCACTCAGTATGA---TCCTGCGATCGTACGGCTTATTCCTCAACTTGT 299480 Query 145982 CTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCT--TGGAGTCCAC 146039 | |||| ||| ||||||||| |||||||| ||| |||||| | | || || | Sbjct 299481 CAATCACATCCGCGAGCTGGTCGACGCCCTGGCCCGTGTAATCCGCCGCATGCCCTCTA- 299539 Query 146040 GTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC 146099 ||| | || ||||| || | ||||||||| || || || ||||||| || || ||| Sbjct 299540 -TACTCCGCGCCGAAATGGCGCCACTGGAAGCCATATACAGGCCCCAACTCGCCCTCCTC 299598 Query 146100 CCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTT 146159 || ||||||| | | | ||||| | | || ||||||||| ||||||||||||| Sbjct 299599 GTAGTCGGCCAGCCCCACGCTGTCGAGGTACGCGCGCGACCCGTTGCCGTCCCAGATCTT 299658 Query 146160 GACGCCCCTCGCGGAGAG 146177 || ||| |||||||| Sbjct 299659 GATGCCGGCGGCGGAGAG 299676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076291058760