Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq15 129 7e-25
>seq15
Length=938269
Score = 129 bits (142), Expect = 7e-25
Identities = 438/678 (65%), Gaps = 51/678 (8%)
Strand=Plus/Plus
Query 145545 CATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCCGCCCT 145604
||||| ||| | || |||| || || | || ||| | | | |||| ||||| ||| |
Sbjct 299005 CATCTTCATCGCAATCCCCGCATGCGGCTTATACCCCACGACCTCAAACTCCTCAGCCGT 299064
Query 145605 GAAGTCATCTATG-TCCTCC--ACCCGCCTCAGGATCCTGAGCCTGGGAAAGGGCCGGGG 145661
| |||| ||| ||| || || |||| ||| | ||| | ||||| || ||
Sbjct 299065 CCACCCATCAATGCTCCCCCCAACATCCCTCTTGATATTCAGCGTCGGAAACTCGCGCGG 299124
Query 145662 GCTCCTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCC 145720
||| | || | ||| | |||||| | || || |||| || || ||||| || |
Sbjct 299125 -CTCACGCTCCAACTGCACCTTCAGCGCGTCGACATGGTCCGCATACACATGCGCATCGC 299183
Query 145721 CCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCA 145780
||| | ||| |||| |||||||| | | | | || || | ||||| || |
Sbjct 299184 CCATGGTGTGTGTGAACGTGCCGGGCTCCAAGTCGCATACATGAGCCAGCATGTGCGTTA 299243
Query 145781 GCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGT 145840
| || ||||||||| |||||||| ||||| |||||||||||||| | ||| ||||| |
Sbjct 299244 ATAAGGCGTAGCTGGCAATGTTGAACGGCACGCCCAGCCCCATGTCGCACGACCGCTGAT 299303
Query 145841 ACAGCTG-----GCAGGA-------GAGCTCCC-CGCC-CGCC----------------- 145869
| ||| | ||| | | ||| | |||| ||||
Sbjct 299304 ATAGCAGCGAGTGCAATACGCCTCTGGGCTTCTGCGCCTCGCCCTCGCGCTGTCGCGGAA 299363
Query 145870 -----ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCG 145924
|||||||||||| | | |||||| || ||||||||||| ||| ||||
Sbjct 299364 ACGAGACGTAGAACTGGGCAAACATGTGGCAAGGGGGCAGGGCCATTTTCTTCAGATCCG 299423
Query 145925 CCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCG---GGGTTCCTCTTGATCTCCC 145981
| |||||||| || | || | || |||||| ||| || || || | | ||
Sbjct 299424 CGGGGTTCCATGCACTCAGTATGA---TCCTGCGATCGTACGGCTTATTCCTCAACTTGT 299480
Query 145982 CTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCT--TGGAGTCCAC 146039
| |||| ||| ||||||||| |||||||| ||| |||||| | | || || |
Sbjct 299481 CAATCACATCCGCGAGCTGGTCGACGCCCTGGCCCGTGTAATCCGCCGCATGCCCTCTA- 299539
Query 146040 GTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC 146099
||| | || ||||| || | ||||||||| || || || ||||||| || || |||
Sbjct 299540 -TACTCCGCGCCGAAATGGCGCCACTGGAAGCCATATACAGGCCCCAACTCGCCCTCCTC 299598
Query 146100 CCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTT 146159
|| ||||||| | | | ||||| | | || ||||||||| |||||||||||||
Sbjct 299599 GTAGTCGGCCAGCCCCACGCTGTCGAGGTACGCGCGCGACCCGTTGCCGTCCCAGATCTT 299658
Query 146160 GACGCCCCTCGCGGAGAG 146177
|| ||| ||||||||
Sbjct 299659 GATGCCGGCGGCGGAGAG 299676
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590076291058760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |