Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq6 131 1e-25
seq16 93.3 4e-14
seq29 87.8 2e-12
>seq6
Length=1708680
Score = 131 bits (144), Expect = 1e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | || ||||| ||||| || ||||| || | |||||| |||||
Sbjct 770967 CACCAAGTGCAGAGTGGACTCCTTTTGGATATTGTAGTCCGAAAGAGTGCGACCGTCCTC 771026
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||||||| || ||| |||| || ||||||||||||||||| ||||||||||| |||
Sbjct 771027 GAGCTGTTTACCCGCGAAGATAAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTATCTTG 771086
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||| || || || | |||| |||||| | ||| ||||| | || | || ||
Sbjct 771087 AATCTTGCTCTTTACGTTGTCGATGGTGTCAGACGACTCAACCTCTAGAGTGATTGTCTT 771146
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||||| || || || || ||||||||
Sbjct 771147 GCCGGTCAAGGTCTTGACGAAGATCTGCAT 771176
Score = 120 bits (132), Expect = 3e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||||| |||||| || || ||||||||||| || | |||||| ||||||
Sbjct 771196 ACCAAGTGGAGTGTAGATTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGACCGTCCTCG 771255
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| ||||| ||| |||| | ||||||||||| || || || ||||||||||||
Sbjct 771256 AGCTGCTTTCCTGCGAAGATCAAGCGCTGCTGATCTGGGGGAATACCCTCCTTGTCTTGG 771315
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
||||| || || | || | ||| || | |||||||||| ||| | || ||
Sbjct 771316 ATTTTGCTCTTTACGTTATCAATGGTATCTGACGATTCGACCTCGAGGGTGATGGTCTTT 771375
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || ||||| || || || || |||||
Sbjct 771376 CCTGTGAGAGTCTTGACGAAGATTTGCAT 771404
Score = 100 bits (110), Expect = 2e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595
|||| || || || || || |||||||| || || |||||| |||||| |||||
Sbjct 771430 TGGAGGGTCGATTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGCCCATCCTCAAGCTGC 771489
Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655
|| |||||| |||| | |||||||| || ||||| ||||||||||| || || ||
Sbjct 771490 TTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGGATCTTG 771549
Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715
|| || | |||| || |||| ||||||||| | ||| | || || || ||
Sbjct 771550 CTCTTGACATTGTCGATAGTATCCGAAGACTCGACCTCCAAGGTGATGGTCTTACCCGTG 771609
Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738
|| ||||| || || ||||||||
Sbjct 771610 AGGGTTTTGACGAAGATCTGCAT 771632
Score = 95.1 bits (104), Expect = 1e-14
Identities = 129/180 (72%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| |||||||||||||||||| | ||||| || ||||||||
Sbjct 771657 GTGGAGGGTTGACTCCTTTTGAATGTTGTAATCGGAGAGGGTGCGGCCGTCTTCGAGCTG 771716
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| || ||| |||| | |||||||| || ||||| ||||||||||| || || ||
Sbjct 771717 CTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGGATCTT 771776
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | |||| ||||||| | ||| ||||||| || | || ||||| ||
Sbjct 771777 GCTCTTGACGTTGTCGATAGTGTCCGAGGACTCAACCTCGAGCGTGATGGTCTTGCCCGT 771836
>seq16
Length=934283
Score = 93.3 bits (102), Expect = 4e-14
Identities = 90/116 (78%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||||| || ||||| || || |||||||| ||| | |||||| ||||||
Sbjct 373761 ACCAAGTGGAGCGTTGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCCTCG 373820
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
||||| || || ||| |||| || |||||||| || || || ||||||||||| ||
Sbjct 373821 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTATC 373876
>seq29
Length=430389
Score = 87.8 bits (96), Expect = 2e-12
Identities = 90/118 (76%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||||| || ||||| || || |||||||| ||| | || || ||||||
Sbjct 67590 ACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTCCTCG 67531
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647
||||| || || ||| |||| || |||||||| || || || || |||||||||||||
Sbjct 67530 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGAATTCCCTCCTTGTCTG 67473
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433830035175748
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |