Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq6 107 1e-18
seq29 82.4 5e-11
>seq6
Length=1708680
Score = 107 bits (118), Expect = 1e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257
||| ||||| ||||||||||| ||||| || | || || | ||||||||| |||||
Sbjct 771441 TTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGCCCATCCTCAAGCTGCTTGCCAGCGAA 771500
Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317
|| | ||||||||||| || | || |||||| || ||||| ||| | ||
Sbjct 771501 GATCAAGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGGATCTTGCTCTTGACATT 771560
Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377
| | || | ||| | || ||||| |||| |||||||| || || ||||| ||||| ||
Sbjct 771561 GTCGATAGTATCCGAAGACTCGACCTCCAAGGTGATGGTCTTACCCGTGAGGGTTTTGAC 771620
Query 34378 AAAGATCTGCAT 34389
|||||||||||
Sbjct 771621 GAAGATCTGCAT 771632
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| |||| ||| | ||| ||| ||||| ||||||||||| || || || ||||
Sbjct 771193 AGAACCAAGTGGAGTGTAGATTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGACCGTCC 771252
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | |||||| |||||||| || | |||||||| || ||| | | |||||||||
Sbjct 771253 TCGAGCTGCTTTCCTGCGAAGATCAAGCGCTGCTGATCTGGGGGAATACCCTCCTTGTCT 771312
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
|| || ||||| | | || | ||| | ||||||||| || | ||||||||
Sbjct 771313 TGGATTTTGCTCTTTACGTTATCAATGGTATCTGACGATTCGACCTCGAGGGTGATGGTC 771372
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| || |||||||| || || ||||| |||||
Sbjct 771373 TTTCCTGTGAGAGTCTTGACGAAGATTTGCAT 771404
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221
|||||| ||||| | ||||||| ||| | ||| || || || || |||||||| ||
Sbjct 770949 TCCGCCACGCAGACGAAGCACCAAGTGCAGAGTGGACTCCTTTTGGATATTGTAGTCCGA 771008
Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
|| || |||| || | ||| || || ||||| || || |||||||| ||| ||
Sbjct 771009 AAGAGTGCGACCGTCCTCGAGCTGTTTACCCGCGAAGATAAGGCGCTGCTGATCGGGAGG 771068
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341
| || |||||| || ||||| ||||| | | | || | || | ||| || ||
Sbjct 771069 GATGCCCTCCTTATCTTGAATCTTGCTCTTTACGTTGTCGATGGTGTCAGACGACTCAAC 771128
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | ||||| || |||||||| | || || || |||||||||||
Sbjct 771129 CTCTAGAGTGATTGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 771176
>seq29
Length=430389
Score = 82.4 bits (90), Expect = 5e-11
Identities = 77/98 (79%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| |||||||||||||| || |||| |||| || | ||||||||| |||||
Sbjct 67572 TCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 67513
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296
|| || ||||||||||| ||| | | |||||||||
Sbjct 67512 ATCAGGCGCTGCTGGTCAGGGGGAATTCCCTCCTTGTC 67475
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323071728316640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |