Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq17 342 5e-89
seq18 134 1e-26
>seq17
Length=926260
Score = 342 bits (378), Expect = 5e-89
Identities = 1207/1862 (65%), Gaps = 56/1862 (3%)
Strand=Plus/Plus
Query 22143 TGGTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCG 22202
|||| || || || |||||||||||||| ||||| | |||||| | ||| || ||||
Sbjct 105659 TGGTACGGAGGTAGTACATGCCCGTCTTGAGACCAAGCTTCCAACCAGCAAAGTGCATCG 105718
Query 22203 ACGTCAATTTTCCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGA 22262
|||| | || || | | ||| | ||||| | |||| |||||| ||||||||
Sbjct 105719 ACGTGATCTTGCCCATAGTAGGCTCCTTCATGTGGATGTTGAGAGACTGAGACTGATCGA 105778
Query 22263 TAAACGCTCCTCGATCGGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGG 22322
| || || || || || || ||||| | || | || ||| || |||||||| || |
Sbjct 105779 TGAAGGCACCACGGTCAGCAGCCATCTGGATGATGGTTCGCTGAGAGATTTCCCAAACAG 105838
Query 22323 TCTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCGA-TCCTCTGGACGGACCCGTTA 22381
||||||| || | || ||||| || || | | || | | |||| ||| ||
Sbjct 105839 TCTTGTAAAGAGTCTTGGTCTCTTCAGGAAT-GTTGGGAATGCGTTGGATGGAGCCACC- 105896
Query 22382 TTGTGTA-TGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTT 22440
|| || | |||| ||| || || | || ||||| ||| || || || ||| ||
Sbjct 105897 TTCTGCAATGATACGATTCTTCATGTTCTCAGACCACAGACCCATATCGACCAGATCCTT 105956
Query 22441 GACCAG--ATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATG 22498
| ||| ||| |||| || ||||| ||||| || | | || ||||| ||| |||
Sbjct 105957 AAGCAGCCATG--GGTTGACGACTTGGAACTCACCAGCGAGCACACGGCGGGAGTAGATG 106014
Query 22499 TTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTC 22558
|| |||||| | || || || | || |||||||| || ||||||| ||| || || ||
Sbjct 106015 TTCGATGTGTATGGCTCAAAGCACTCGTTGTTTCCGAGGATCTGAGAGGTAGATGCAGTT 106074
Query 22559 GGCATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGC 22618
||||| || || | || || ||||| | | || |||| | ||| || ||| ||
Sbjct 106075 GGCATGGGTGCAATCAAAAGAGAGTTGCGAACACCATGCTGAGCAATCTTCTCCTTCAGG 106134
Query 22619 ATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACG 22678
| ||||||||||||||| | || |||||||| |||||| ||||| || | |
Sbjct 106135 GAGGCCCAGTCCCACAGATCAGTAGGAGTCACATT---CCACATGTCGTACTGAAGAATA 106191
Query 22679 CCGCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCG 22738
|| || | | || || ||||| || | ||| || || | | ||| | ||
Sbjct 106192 CCCTGAGACACTGGCGAACCCTCGTAGGTCTGGTATGGGCCGAGTTCCTTGGCGATGTCA 106251
Query 22739 CAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCA-ATTC--G 22795
|| | | ||| ||| || || || |||||||| | |||| | ||| |
Sbjct 106252 CAAGATGAAGTGAGGGCGGCGTGGTAGATGGTTTCGAAGATCTGGATGTTGAGCTTCTTG 106311
Query 22796 GCGGC-GGCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTG 22854
|| | |||||| ||| | |||| |||| || ||| || || || | ||| ||
Sbjct 106312 GCCTCTGGCGAC----TCGAAGGGCAAGCGCAGAGCCAGGAAAGCATCAGCAAGACCTTG 106367
Query 22855 AACGCCTATACCGATCGGTCGGTTTTTCA----GATTCGACACTTTTGCCTCGGGCAAAG 22910
|| || || || || || | || | | | |||| |||||| | |
Sbjct 106368 GACACCCATGCCAATAGGCCTGTGGCGGAAGTTGCTGCGAC----GTGCCTCCTCGACTG 106423
Query 22911 GATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNN 22970
| || || ||||| | ||||||| || | || |||| | || |
Sbjct 106424 GGTAGTGGTTGACCTCGATGATCTTGTTCAAATTGCGAGTGACAACCTGGGTGACCTCGT 106483
Query 22971 NNNNNNNNTCAAAGTCGTAAACGCC-CGATTGTA--CAACAAACTTGTTGACGGCGATCG 23027
| |||||| | |||| || ||||| ||||||| | || || || |
Sbjct 106484 GAAGCTTTTGGAAGTCGAACTCGCCACGCTTGTAATCAACAAA--GGATG--GGAGAGCA 106539
Query 23028 AGGCAAG----ATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTA 23083
||| ||| |||||| || ||||||||||| | |||||||| | || || ||
Sbjct 106540 AGGGAAGCAAGATTGCAGACAGCCACCTCGTCAGGAGCAGTGTACTCGATGATCTCAGTG 106599
Query 23084 CATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAA 23143
|| || ||| | || || |||| || |||||||||| || | ||||| |
Sbjct 106600 CAGAGGTTGGAGCTTCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCG 106659
Query 23144 TCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCAC 23203
||||||||||||||| | || | || |||||| ||||| ||||| || || |||
Sbjct 106660 TCCTTGTAGAGCATGAAAGGGTTACCAGTCTCGGTCTGCGCCTCGAGAATGGCATACCAA 106719
Query 23204 ATAGTCTGAGCGTGAACACGTCGCACGTACCTGCCTTCT--TCCTCGTACTTTTGGTACA 23261
| |||| || | || || |||| ||| |||| | |||||| ||||| |
Sbjct 106720 AGCTTCTGGGCACGGAC-GGTTTCACG-ACCACGATTCTCCTTCTCGTAGCGGTGGTAGA 106777
Query 23262 ACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGA 23321
| | || || || |||||||| ||||| || || || | | | ||||| | |
Sbjct 106778 GCTCCTCGAACTCATCACCGTAAACATCGGCAAGACCAGGAGCCTCATTGGGACAGAACA 106837
Query 23322 GACTCCACATTGAGTCATT---TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAG 23378
| || |||| | |||| || ||||| |||| || ||||| || ||||| | ||
Sbjct 106838 GCGTC--CATTCA-CCATTCTCTTGGACGCGCTTCATGAAGAGATCGGGGATCCACAAAG 106894
Query 23379 CGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAA 23438
||||||| || || || ||||| ||||| || |||||| |||||| ||| || | |
Sbjct 106895 CGTAGAAGAGATCACGAGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAAGTCAAGGA 106954
Query 23439 AGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTAT 23498
|| | || || || || ||||| ||||| || || | |||||| || || || | ||| |
Sbjct 106955 AGCCGAAGACATCGGCGTGCCATGGCTCAAGATAGATGGCAAAGGCACCGGGACGCTTGT 107014
Query 23499 TGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGAC 23558
|||| ||||| || |||||||| || ||||||||||| || | ||||| || | |||||
Sbjct 107015 TGCCACCCTGGTCAACGTAACGTGCTGTGTTGTTGTAGACACGGAGCATAGGAATGAGAC 107074
Query 23559 CGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGT 23618
| || || | ||| ||| | | || ||| | || || | || ||||
Sbjct 107075 CATTCGAAGTTCCGTTGGTGCCACCGATGTAGGAGCCTGTGGCACGGATACGATGCACGT 107134
Query 23619 GGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGA 23678
|| || || || || | | || || |||| || || ||||| ||||||||||
Sbjct 107135 TGAGGCCAATACCGCCAGCAGTCTTGGAGATCAAGGCACAGGTCTTCAGTGTGTCGTAGA 107194
Query 23679 TGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGG 23738
| || || |||||||||||||| | | | | ||| || || ||||| || | |
Sbjct 107195 TACCGTCAATGCTGTCCTCTTTCATGTCAATGAGGAAGCAGGAGGACATCTGAGGGGATG 107254
Query 23739 GCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACAT-TAGA 23797
| || | || ||| || ||||| |||||| |||||||| | ||||| |||
Sbjct 107255 GAGTGCCTGCGTTGAAGAGCGTCGGCGAGGCGTGTGTAAAGTACTTCTGTGACATGTAG- 107313
Query 23798 TTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATC 23857
| |||||| || ||||| || ||||| | ||||| || |||| ||||| ||||||
Sbjct 107314 TCGTACGTCTCAATGGCCTTCTCGATGTCATTGCCGTGAATGCCGACAGCGACACGCATC 107373
Query 23858 ATCATGTATTGAGGTCTCTCG---ACCGTGACGCCGTTAATTTTGAACAGATATGAACGT 23914
| ||||| ||| || | |||| ||| | |||||| || || || ||||| ||
Sbjct 107374 AGCATGTGTTGTGGACGCTCGGCAACCTT---GCCGTTGATGCGGAGGAGGTATGAGCGC 107430
Query 23915 TGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAA 23974
| | || || || || || | | ||||| |||||||| |||| || ||||||||
Sbjct 107431 TCGAGGGTCTTGAAGCCGAAGAACTGGTAGTTGAAGTCACGGTCGTAGACGATGGCCGAG 107490
Query 23975 TT 23976
||
Sbjct 107491 TT 107492
>seq18
Length=888533
Score = 134 bits (148), Expect = 1e-26
Identities = 231/333 (69%), Gaps = 8/333 (2%)
Strand=Plus/Minus
Query 57960 ACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGC 58019
|| |||||| | | || |||| || || ||||| || || || ||||| ||| |
Sbjct 234791 ACTTTCGCCAACCGTCTCGTCGCATTTGCTGCCGTGGAGGGCATCTTCTTCAGCGGCTCC 234732
Query 58020 TTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAAC 58079
|||||| | || |||||| | ||||| || || |||||||| || ||||| || ||||
Sbjct 234731 TTTGCGTCCATCTTTTGGCTCAAGAAGCGTGGTCTGATGCCAGGTCTGACATTCTCCAAC 234672
Query 58080 GAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCAC 58139
||| | || || |||||||||||| | ||||||||||| || ||||| | | |||||
Sbjct 234671 GAGCTCATCTCCCGCGACGAGGGTATGCATACTGATTTCGCATGCCTGCTCTTCTCTC-- 234614
Query 58140 ATTGTCAATAAACCGACGCGGGATCGCATCT----TGGACATTATCACCGAGGCGGTCGC 58195
|| |||| ||||| | | | | | ||| || ||| ||||| ||||| ||| |
Sbjct 234613 -TTCTCAA-CAACCGCCCCAGCAAGGAGTCTGTCCAGGCCATCATCACTGAGGCTGTCAC 234556
Query 58196 GATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGA 58255
|| || | ||||| | | ||| || || || || | || |||||||||
Sbjct 234555 AATTGAGCAAGAGTTCTTGAGCGAGGCTCTCCCCTGCGCACTTCTTGGTATGAACGCCAC 234496
Query 58256 TTTGATGTCAAAGTACATTGAGTTTGTTGCCGA 58288
| |||| ||||||||||||| ||||||||
Sbjct 234495 CCTTATGTGCCAGTACATTGAGTTCGTTGCCGA 234463
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766015526480
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