Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq15 89.7 4e-13
>seq15
Length=938269
Score = 89.7 bits (98), Expect = 4e-13
Identities = 209/306 (68%), Gaps = 7/306 (2%)
Strand=Plus/Plus
Query 21111 ACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGG 21170
||||| ||||| || | ||| ||||| || || ||||| | || |||||||||
Sbjct 299369 ACGTAGAACTGGGCAAACATGTGGCAAGGGGGCAGGGCCATTTTCTTCAGATCCGCGGGG 299428
Query 21171 TTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCGCCT-GTTAATTAGATCCACCAC 21229
||||| || | || | ||| | ||||||| ||| | | || | | || | |||
Sbjct 299429 TTCCATGCACTCAGTATGATCCTGCGATCGTACGGCTTATTCCTCAACTTG-TCAATCAC 299487
Query 21230 GTAACGC-AGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCG 21288
| ||| |||||||| || ||||| ||| ||| | || | ||| || |||||||
Sbjct 299488 AT-CCGCGAGCTGGTCGACGCCCTGGCCCGTGTAATCCGCCGCATGCCCTCTATACTCCG 299546
Query 21289 CCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGTCCC 21348
| || ||||| | ||||||||| || || || ||||||| |||||||| | |||
Sbjct 299547 CGCCGAAATGGCGCCACTGGAAGCCATATACAGGCCCCAACTCGCCCTCCTCGTAGTCGG 299606
Query 21349 CGAAGCCCTGCGCCG-CCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTACGCC- 21406
| ||||| ||| | | | | ||||| ||||||| ||||||| || || | |||
Sbjct 299607 C-CAGCCCCACGCTGTCGAGGTACGCGCGCGACCCGTTGCCGTCCCAGATCTTGATGCCG 299665
Query 21407 GCGGCG 21412
||||||
Sbjct 299666 GCGGCG 299671
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427775640267120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |