Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016- 05-18] 69 sequences; 38,501,010 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq15 89.7 4e-13 >seq15 Length=938269 Score = 89.7 bits (98), Expect = 4e-13 Identities = 209/306 (68%), Gaps = 7/306 (2%) Strand=Plus/Plus Query 21111 ACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGG 21170 ||||| ||||| || | ||| ||||| || || ||||| | || ||||||||| Sbjct 299369 ACGTAGAACTGGGCAAACATGTGGCAAGGGGGCAGGGCCATTTTCTTCAGATCCGCGGGG 299428 Query 21171 TTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCGCCT-GTTAATTAGATCCACCAC 21229 ||||| || | || | ||| | ||||||| ||| | | || | | || | ||| Sbjct 299429 TTCCATGCACTCAGTATGATCCTGCGATCGTACGGCTTATTCCTCAACTTG-TCAATCAC 299487 Query 21230 GTAACGC-AGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCG 21288 | ||| |||||||| || ||||| ||| ||| | || | ||| || ||||||| Sbjct 299488 AT-CCGCGAGCTGGTCGACGCCCTGGCCCGTGTAATCCGCCGCATGCCCTCTATACTCCG 299546 Query 21289 CCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGTCCC 21348 | || ||||| | ||||||||| || || || ||||||| |||||||| | ||| Sbjct 299547 CGCCGAAATGGCGCCACTGGAAGCCATATACAGGCCCCAACTCGCCCTCCTCGTAGTCGG 299606 Query 21349 CGAAGCCCTGCGCCG-CCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTACGCC- 21406 | ||||| ||| | | | | ||||| ||||||| ||||||| || || | ||| Sbjct 299607 C-CAGCCCCACGCTGTCGAGGTACGCGCGCGACCCGTTGCCGTCCCAGATCTTGATGCCG 299665 Query 21407 GCGGCG 21412 |||||| Sbjct 299666 GCGGCG 299671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427775640267120