Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq17 156 6e-33
seq18 102 1e-16
>seq17
Length=926260
Score = 156 bits (172), Expect = 6e-33
Identities = 382/576 (66%), Gaps = 5/576 (1%)
Strand=Plus/Plus
Query 78706 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 78765
|||| ||||| |||||||| || ||||| || |||| | ||||| || ||||||||
Sbjct 105619 TCCTGGTCCACAGTGAATTGGATAGGAGCAGAGGCGGCCATGGTACGGAGGTAGTACATG 105678
Query 78766 CCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTC 78825
||||| || ||||| || |||| || || ||||| ||| | ||| | |
Sbjct 105679 CCCGTCTTGAGACCAAGCTTCCAACCAGCAAAGTGCATCGACGTGATCTTGCCCATAGTA 105738
Query 78826 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 78885
|| || || ||||| || | ||| ||| |||||||||||||| || | ||| |||
Sbjct 105739 GGCTCCTTCATGTGGATGTTGAGAGACTGAGACTGATCGATGAAGGCACCACGGTCAGCA 105798
Query 78886 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 78945
||||| | ||||| || || | |||||||||| ||| || |||| ||| |
Sbjct 105799 GCCATCTGGATGATGGTTCGCTGAGAGATTTCCCAAACAGTCTTGTAAAGAGTCTTGGTC 105858
Query 78946 TCTTCTGGAAGGTTTGTATT---CTGAATGGATCCACCATCTGCCATAATCCTATTCTTG 79002
||||| |||| ||| | | | || ||||| ||||| ||||| || || | ||||||
Sbjct 105859 TCTTCAGGAATGTTGGGAATGCGTTGGATGGAGCCACCTTCTGCAATGATACGATTCTTC 105918
Query 79003 ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 79062
|| | ||| ||| | | ||| | | | |||| || || || || |||
Sbjct 105919 ATGTTCTCAGACCACAGACCCATATCGACCAGATCCTTAAGCAGCCATGGGTTGACGACT 105978
Query 79063 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGAT 79122
|| || || |||| | || | || | ||| || || || ||||| || | |
Sbjct 105979 TGGAACTCACCAGCGAGCACACGGCGGGAGTAGATGTTCGATGTGTATGGCTCAAAGCAC 106038
Query 79123 TCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTA 79182
|| || ||||| | || |||| || ||||| |||||||| ||||| | ||| | |
Sbjct 106039 TCGTTGTTTCCGAGGATCTGAGAGGTAGATGCAGTTGGCATGGGTGCAATCAAAAGAGAG 106098
Query 79183 TTTCTAAGACCGT-ATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGA 79241
|| | || ||| | ||| | || || || || || || |||| ||||| |||||||
Sbjct 106099 TTGCGAACACCATGCTGAGC-AATCTTCTCCTTCAGGGAGGCCCAGTCCCACAGATCAGT 106157
Query 79242 CGGGACAACATTCCAAAGATCATATTGTAGAATACC 79277
|| |||||||| | || || || ||||||||
Sbjct 106158 AGGAGTCACATTCCACATGTCGTACTGAAGAATACC 106193
Score = 143 bits (158), Expect = 4e-29
Identities = 404/612 (66%), Gaps = 14/612 (2%)
Strand=Plus/Plus
Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920
|||||||| || || |||||||| | | |||||| || | ||||| | || || |
Sbjct 106783 TCGAACTCATCACCGTAAACATCGGCAAGACCAGGAGCCTCATTGGGACAGAACAGCGTC 106842
Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 79980
|| || |||| || | || || ||||| |||||||| || ||||| | ||| ||
Sbjct 106843 CATTCACCATTCTCTTGGACGCGCTTCATGAAGAGATCGGGGATCCACAAAGCGTAGAAG 106902
Query 79981 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 80040
||||| | | | ||| || || || ||||| | || ||||| | |
Sbjct 106903 AGATCACGAGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAAGTCAAGGAAGCCGAAG 106962
Query 80041 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCC 80100
| ||| | ||||| || || | || ||||| | | || || || ||||| || |||
Sbjct 106963 ACATCGGCGTGCCATGGCTCAAGATAGATGGCAAAGGCACCGGGACGCTTGTTGCCACCC 107022
Query 80101 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 80160
|| || | ||| | || ||||| || || || | | ||| ||||| | |||||| ||
Sbjct 107023 TGGTCAACGTAACGTGCTGTGTTGTTGTAGACACGGAGCATAGGAATGAGACCATTCGAA 107082
Query 80161 GTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAA--TTGATAGAC 80218
|| || ||||| || ||| ||| || ||||||| ||| | | |||| | |
Sbjct 107083 GTTCCGTTGGTGCCACCGATGTAGGAGCCTGTGGCACGGATACGATGCACGTTGA--GGC 107140
Query 80219 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCT 80278
| || || || || | || ||||| || || || || | || || ||||| || |
Sbjct 107141 CAATACCGCCAGCAGTCTTGGAGATCAAGGCACAGGTCTTCAGTGTGTCGTAGATACCGT 107200
Query 80279 CTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTG--GTGACGACTAGT 80336
| ||||| || || |||||| || || || ||| ||||| || | || | |||
Sbjct 107201 CAATGCTGTCCTCTTTCATGTCAATGAGGAAGCAGGAGGACATCTGAGGGGATGG--AGT 107258
Query 80337 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACA-GTAGATTGT 80395
|| || || || | || || || ||||| ||||| | || | |||| |||| | ||
Sbjct 107259 GCCTGCGTTGAAGAGCGTCGGCGAGGCGTGTGTAAAGTACTTCTGTGACATGTAG-TCGT 107317
Query 80396 ACGTCTCAATAGCTGATTCTATATCCCATTG--ATGAATTCCTACCGCGACACGCATTAA 80453
|||||||||| || |||| || ||||| ||||| || || ||||||||||| |
Sbjct 107318 ACGTCTCAATGGC--CTTCTCGATGTCATTGCCGTGAATGCCGACAGCGACACGCATCAG 107375
Query 80454 CATGTGCTGAGG 80465
|||||| || ||
Sbjct 107376 CATGTGTTGTGG 107387
>seq18
Length=888533
Score = 102 bits (112), Expect = 1e-16
Identities = 112/149 (75%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019
||||||||||| |||| ||||||||| | || || |||||||| || || ||
Sbjct 234628 CATGCGAAATCAGTATGCATACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAATGTCAGA 234687
Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079
|| ||||| || |||||||| || |||||||| ||||||||||| || || ||||||
Sbjct 234688 CCTGGCATCAGACCACGCTTCTTGAGCCAAAAGATGGACGCAAAGGAGCCGCTGAAGAAG 234747
Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAG 50108
|| || || || || ||||| || || ||
Sbjct 234748 ATGCCCTCCACGGCAGCAAATGCGACGAG 234776
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718268180493160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |