Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016- 05-18] 69 sequences; 38,501,010 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq24 122 1e-23 seq7 107 3e-19 >seq24 Length=653432 Score = 122 bits (134), Expect = 1e-23 Identities = 211/317 (67%), Gaps = 51/317 (16%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGC-AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||||||| |||| |||||| || |||||||| || ||||||||||| ||||| Sbjct 597386 GCCAAGCGTCATCGCAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCTAT 597444 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC--------------------- 16530 ||||||||| ||||||||||| || ||||||||| |||| Sbjct 597445 CCGTCGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATCTCAGCCAGTATGTGTCTCGCAGC 597504 Query 16531 -------TGGAT---------------------TGGTCTATGAAGAGATTCGTGATGTTT 16562 || || || |||| || |||| |||| |||| Sbjct 597505 CGCTTCTTGCATTCAACTCTAACAACCCCGCAGTGATCTACGAGGAGACCCGTGGTGTTC 597564 Query 16563 TGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAAC 16622 | |||| ||||||| || || |||| ||| || || || || |||||||| || | Sbjct 597565 TCAAGACCTTCCTCGAGGGTGTCATCCGTGACGCCGTCACATACACTGAGCACGCCAAGC 597624 Query 16623 GTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTT 16682 | ||||| ||||| ||| | ||| |||||||||| | || || |||||||| | | | Sbjct 597625 GCAAGACCGTCACTTCCCTCGATGTCGTCTATGCTCTCAAGCGACAAGGCCGCACCCTGT 597684 Query 16683 ATGGTTTTGGAAGTTAA 16699 ||||||| || ||||| Sbjct 597685 ATGGTTTCGGTGGTTAA 597701 >seq7 Length=1693473 Score = 107 bits (118), Expect = 3e-19 Identities = 86/101 (85%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| ||||||| ||| |||||| || |||||||| || ||||||||||| || || Sbjct 441837 GCCAAGCGCCATCGCAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCCAT 441895 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||||||||| ||||||||||| || ||||||||| | |||| Sbjct 441896 CCGTCGTCTTGCTCGTCGTGGCGGTGTCAAGCGTATTTCTG 441936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075136912817