Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq24 122 1e-23
seq7 107 3e-19
>seq24
Length=653432
Score = 122 bits (134), Expect = 1e-23
Identities = 211/317 (67%), Gaps = 51/317 (16%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGC-AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||||||| |||| |||||| || |||||||| || ||||||||||| |||||
Sbjct 597386 GCCAAGCGTCATCGCAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCTAT 597444
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC--------------------- 16530
||||||||| ||||||||||| || ||||||||| ||||
Sbjct 597445 CCGTCGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATCTCAGCCAGTATGTGTCTCGCAGC 597504
Query 16531 -------TGGAT---------------------TGGTCTATGAAGAGATTCGTGATGTTT 16562
|| || || |||| || |||| |||| ||||
Sbjct 597505 CGCTTCTTGCATTCAACTCTAACAACCCCGCAGTGATCTACGAGGAGACCCGTGGTGTTC 597564
Query 16563 TGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAAC 16622
| |||| ||||||| || || |||| ||| || || || || |||||||| || |
Sbjct 597565 TCAAGACCTTCCTCGAGGGTGTCATCCGTGACGCCGTCACATACACTGAGCACGCCAAGC 597624
Query 16623 GTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTT 16682
| ||||| ||||| ||| | ||| |||||||||| | || || |||||||| | | |
Sbjct 597625 GCAAGACCGTCACTTCCCTCGATGTCGTCTATGCTCTCAAGCGACAAGGCCGCACCCTGT 597684
Query 16683 ATGGTTTTGGAAGTTAA 16699
||||||| || |||||
Sbjct 597685 ATGGTTTCGGTGGTTAA 597701
>seq7
Length=1693473
Score = 107 bits (118), Expect = 3e-19
Identities = 86/101 (85%), Gaps = 2/101 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||| ||||||| ||| |||||| || |||||||| || ||||||||||| || ||
Sbjct 441837 GCCAAGCGCCATCGCAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCCAT 441895
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||||||||| ||||||||||| || ||||||||| | ||||
Sbjct 441896 CCGTCGTCTTGCTCGTCGTGGCGGTGTCAAGCGTATTTCTG 441936
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075136912817
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |