Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq17 297 5e-75
seq4 86.0 2e-11
seq18 84.2 6e-11
>seq17
Length=926260
Score = 297 bits (328), Expect = 5e-75
Identities = 1060/1636 (65%), Gaps = 46/1636 (3%)
Strand=Plus/Minus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
|| || |||||| |||| || | | ||| || || |||| || |||||||| ||
Sbjct 107294 TTTACACACGCCTCGCCGACGCTCTTCAACGCAGGCACTCCATCCCCTCAGATGTCCTCC 107235
Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666
||||| || | | ||||| || || ||| || ||||||| |||||||| ||||
Sbjct 107234 TGCTTCCTCATTGACATGAAAGAGGACAGCATTGACGGTATCTACGACACACTGAAGACC 107175
Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725
||||| | || ||||||| ||| ||||| ||||| | | || | || | | |||||
Sbjct 107174 TGTGCCTTGATCTCCAAGACTGCTGGCGGTATTGGCCTCAACG-TGCATCGTATCCGTGC 107116
Query 363726 -ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTC 363784
|||| | ||||| | ||||| ||| |||||||| || |||| ||||| |
Sbjct 107115 CACAGG-CTCCTACATCGGTGGCACCAACGGAACTTCGAATGGTCTCATTCCTATGCTCC 107057
Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844
|||| | |||| || || | ||||| ||||||||||| ||||| || || |
Sbjct 107056 GTGTCTACAACAACACAGCACGTTACGTTGACCAGGGTGGCAACAAGCGTCCCGGTGCCT 106997
Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904
|||| || ||||| ||||| || |||||| | || | || ||||| | || || |
Sbjct 106996 TTGCCATCTATCTTGAGCCATGGCACGCCGATGTCTTCGGCTTCCTTGACTTGCGCAAGA 106937
Query 363905 AC-ACGGGAA--AAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTG 363961
|| |||| || |||||| | || || |||||||| ||||| || | ||| | | |
Sbjct 106936 ACCACGGCAAGGAAGAGG---TCCGCGCTCGTGATCTCTTCTACGCTTTGTGGATCCCCG 106880
Query 363962 ACCATTTTATGAAGCGCGT---GGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACG 364018
| | || ||||||||||| ||| ||| ||| ||| | || || || || | |
Sbjct 106879 ATCTCTTCATGAAGCGCGTCCAAGAGAATGGT--GAA-TGGACGCTGTTCTGTCCCAATG 106823
Query 364019 AATGTCCAGGTCTTTCCGATGTATGGGGTGACGACT--ATGTTGCTCTA-------TACG 364069
| ||| |||||| ||||||| | ||||| || | | |||||| ||||
Sbjct 106822 AGGCTCCTGGTCTTGCCGATGTTTACGGTGATGAGTTCGAGGAGCTCTACCACCGCTACG 106763
Query 364070 AAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTG 364129
| ||| | |||||| | |||| | || | | || |||||||| |||| ||
Sbjct 106762 AGAAGGA-GAATCG--------TGGTCGTGAAACCGTCCGTGCCCAGAAGCTTTGGTATG 106712
Query 364130 CCATCATGGATTCGCAGATTGAGACAGGAACACCCTAT-ATGTTGTACAAAGATTCGTGC 364188
|||| | || |||||| ||||| || | ||||| | ||| | ||||| || | |||
Sbjct 106711 CCATTCTCGAGGCGCAGACCGAGACTGGTA-ACCCTTTCATGCTCTACAAGGACGCCTGC 106653
Query 364189 AACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGA 364247
||| | ||| ||||||| || |||| ||||| | || | || |||||| || || ||
Sbjct 106652 AACAGGAAGAGCAACCAGAAGAACCTGGGTACTA-TCCGAAGCTCCAACCTCTGCACTGA 106594
Query 364248 GATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCT 364307
||| || || ||||| ||||| |||||| || || || || ||||| || | || ||
Sbjct 106593 GATCATCGAGTACACTGCTCCTGACGAGGTGGCTGTCTGCAATCTTGCTTCCCTTGCTCT 106534
Query 364308 TCCGGCGTTTG-----TAAAAG-ATGGTACTTTTGACCACCAGCATCTTTATGACGTAAC 364361
|| | |||| || ||| ||| || ||| ||| | ||| | || || ||
Sbjct 106533 CCCATCCTTTGTTGATTACAAGCGTGGCGAGTTCGACTTCCAAAAGCTTCACGAGGTCAC 106474
Query 364362 CTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGA 364421
| | || ||| ||||| | ||||| | ||||| || | || ||| | ||
Sbjct 106473 CCAGGTTGTCACTCGCAATTTGAACAAGATCATCGAGGTCAACCACTACCCAGTCGAGGA 106414
Query 364422 AGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGA 364481
|| || || | || || | || ||||| | ||||| || || || |||||
Sbjct 106413 GGCACGTCGCAGCAACTTCCGCCACAGGCCTATTGGCATGGGTGTCCAAGGTCTTGCTGA 106354
Query 364482 CGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGA 364541
| ||| || || || | || || ||||| || || || || | |
Sbjct 106353 TGCTTTCCTGGCTCTGCGCTTGCCCTTCGAGTCGCCAGAGGCCAAGAAGCTCAACATCCA 106294
Query 364542 GATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGA-TTTGGCAAAAACCA 364600
|||||| ||||| || || ||||| | ||| | || ||||| | | ||| | |
Sbjct 106293 GATCTTCGAAACCATCTACCACGCCGCCCTCACTTCATCTTGTGACATCGCCAAGGAACT 106234
Query 364601 AGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATC 364660
|| | ||| || || ||||| || || | || ||||| | | |||| ||
Sbjct 106233 CGGCCCA-TACCAGACCTACGAGGGTTCGCCAGTGTCTCAGGGTATTCTTCAGTACGACA 106175
Query 364661 TATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGA 364720
| |||||||| || || ||| | ||| |||||| | || || ||
Sbjct 106174 TGTGGAATGTGACTCCTACTGATCTGTGGGACTGGGCCTCCCTGAAGGAGAAGATTGCTC 106115
Query 364721 AGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGA 364780
|||||||| ||||||||| || | | || |||||||| || || ||||| | ||||
Sbjct 106114 AGCATGGTGTTCGCAACTCTCTTTTGATTGCACCCATGCCAACTGCATCTACCTCTCAGA 106055
Query 364781 TCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTC 364840
|||||||||||||||||||||| || || | ||| || | || || ||||| || |
Sbjct 106054 TCCTCGGAAACAACGAGTGCTTTGAGCCATACACATCGAACATCTACTCCCGCCGTGTGC 105995
Query 364841 TTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGC 364900
| | || || || | || || || | || | |||||||| ||| || |
Sbjct 105994 TCGCTGGTGAGTTCCAAGTCGTCAACCCATGGCTGCTTAAGGATCTGGTCGATATGGGTC 105935
Query 364901 TGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTC 364960
||||| ||| | ||||||||| |||||| || | ||| || | || |||||
Sbjct 105934 TGTGGTCTGAGAACATGAAGAATCGTATCATTGCAGAAGGTGGCTCCATCCAACGCATTC 105875
Query 364961 CAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAA 365020
| |||| ||||| ||| || ||||||| || || |||||||| || |||||
Sbjct 105874 CCAACATTCCTGAAGAGACCAAGACTCTTTACAAGACTGTTTGGGAAATCTCTCAGCGAA 105815
Query 365021 CTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACG 365080
| |||| | ||||| || || || ||||| || ||| |||| ||||| | |||
Sbjct 105814 CCATCATCCAGATGGCTGCTGACCGTGGTGCCTTCATCGATCAGTCTCAGTCTCTCAACA 105755
Query 365081 TATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAAT 365140
| ||||| |||| || | |||| | || || ||||| || || |||||
Sbjct 105754 TCCACATGAAGGAGCCTACTATGGGCAAGATCACGTCGATGCACTTTGCTGGTTGGAAGC 105695
Query 365141 CCGGTCTTAAGACAGG 365156
||||| ||||| ||
Sbjct 105694 TTGGTCTCAAGACGGG 105679
>seq4
Length=2048726
Score = 86.0 bits (94), Expect = 2e-11
Identities = 103/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 65872 TTACGAATCGTTCCGTCATAATTGCACATATTATCTTCACTTGCCTTTACAAGACAACGC 65931
|| |||| ||||||||||| || ||| ||||||| ||||| || | || ||||
Sbjct 1808287 TTTCGAACGGTTCCGTCATATTTTACCATGACATCTTCAAGCGCCTTGACCAAACGACGC 1808346
Query 65932 TGGATGTAACCACTGTTTGCAGTTTTTACCGCGGTATCAACGAGACCTTCACGCCCGGAC 65991
|||||||| ||| | | ||||| || || |||||||| | |||||| ||||| || | |
Sbjct 1808347 TGGATGTATCCAGTCTCGGCAGTCTTCACGGCGGTATCGATGAGACCCTCACGACCAGCC 1808406
Query 65992 ATTGCAGAAAAGAAAAACTC 66011
|| || ||||| |||||
Sbjct 1808407 ATGGCGTGGAAGAAGAACTC 1808426
>seq18
Length=888533
Score = 84.2 bits (92), Expect = 6e-11
Identities = 150/216 (69%), Gaps = 5/216 (2%)
Strand=Plus/Minus
Query 22438 AATAAGGCAGATTGGGCGCTGAAATGGATGA---ACAATGAACGTT-CATTCGCGGAACG 22493
|| ||||| |||||||| || |||||| |||| |||| | | ||||| | ||
Sbjct 234836 AAGAAGGCTGATTGGGCCCTTCGATGGATCTCTGACAA-GAACTCTACTTTCGCCAACCG 234778
Query 22494 TCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTT 22553
||| | |||||||||| || || ||||| ||||| || | ||| | |||||
Sbjct 234777 TCTCGTCGCATTTGCTGCCGTGGAGGGCATCTTCTTCAGCGGCTCCTTTGCGTCCATCTT 234718
Query 22554 TTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCG 22613
|||||| || || |||| | ||||| ||||| || || || || ||| | || |||
Sbjct 234717 TTGGCTCAAGAAGCGTGGTCTGATGCCAGGTCTGACATTCTCCAACGAGCTCATCTCCCG 234658
Query 22614 AGATGAGGGTCTTCATACCGATTTTGCGTGTATGCT 22649
|| |||||| | ||||| ||||| || || ||||
Sbjct 234657 CGACGAGGGTATGCATACTGATTTCGCATGCCTGCT 234622
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303352447753958
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |