Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016- 05-18] 69 sequences; 38,501,010 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq17 192 6e-44 seq6 140 3e-28 seq29 98.7 9e-16 seq18 98.7 9e-16 seq16 91.5 1e-13 >seq17 Length=926260 Score = 192 bits (212), Expect = 6e-44 Identities = 925/1450 (64%), Gaps = 43/1450 (3%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 |||||||| || ||||| || || | |||||| || | || | ||| || ||| | || Sbjct 105970 TTGACGACTTGGAACTCACCAGCGAGCACACGGCGGGAGTAGATGTTCGATGTGTATGGC 106029 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 ||||| ||||||| || || ||||| |||| ||| | ||| || |||||| || | | Sbjct 106030 TCAAAGCACTCGTTGTTTCCGAGGATCTGAGAGGTAGATGCAGTTGGCATGGGTGCAATC 106089 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 || | || ||||| | || |||| || | ||||| || | |||| ||||| Sbjct 106090 AAAAGAGAGTTGCGAACACCATGCTGAGCAATCTTCTCCTTCAGGGAGGCCCAGTCCCAC 106149 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCT----CGCTGGCGGG 145293 || ||| || |||| | ||||||||||||||| | ||| |||| | |||||| Sbjct 106150 AGATCAGTAGGAGTCACATTCCACATGTCGTACTGAAGAATACCCTGAGACACTGGCG-- 106207 Query 145294 GCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTT--TTGGCGAGCTCGCAACTCGCCTCC 145351 || | ||| ||| || || |||| ||||||| || ||| | Sbjct 106208 --AACCCTCGTAGGTCTGGTA--TGGGCCGAGTTCCTTGGCGATGTCACAAGATGAAGTG 106263 Query 145352 AGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGC-T 145410 || ||| || || || || ||| || || |||||||| | | || || | || Sbjct 106264 AGGGCGGCGTGGTAGATGGTTTCGAAGATCTGGATGTTGAGCTTCTTGGCCTC-TGGCGA 106322 Query 145411 CTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGAT 145470 |||| | |||| |||||| | |||||||| || || || || | |||| ||| || Sbjct 106323 CTCGAAGGGCAAGCGCAGAGCCAGGAAAGCATCAGCAAGACCTTGGACACCCATGCCAAT 106382 Query 145471 GGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGAT 145530 |||| || | |||||| | ||| ||||| || || | || ||||| Sbjct 106383 AGGCCTGTGGCGGAAGTTGCTGCGACGTGCCTCCTCGACTGGGTAGTGGTTGACCTCGAT 106442 Query 145531 AATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAA 145590 || || ||||| || || || |||| || | | | | ||||| ||||| || Sbjct 106443 GATCTTGTTCAAATTGCGAGTGACAACCTGGGTGACCTCGTGAAGCTTTTGGAAGTCGAA 106502 Query 145591 C---CGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAAC 145647 | | | || || | | ||| || || || | || || | ||| || || Sbjct 106503 CTCGCCACGCTTGTAA---TCAACAAAGGATGGGAGAGCAAGGGAAGCAAGATTGCAGAC 106559 Query 145648 TGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGAT 145707 ||| ||| || | | |||| | | |||||| | ||| | ||| | | ||| Sbjct 106560 AGCCACCTCGTCAGGAGCAGTGTACTCGATGATCTCAGTGCAGAGGTTGGAGCTTCGGAT 106619 Query 145708 GGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGG 145767 || ||||| || | ||| || || ||||||||||| |||||||||||||||||| | || Sbjct 106620 AGTACCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGAAAGG 106679 Query 145768 TCCGCCAGTCTCCACCTGCGTCTCCACGAT---AAAACGGTGCAAGTCCTGCGCACGCAC 145824 |||||||| ||||| ||| | || | | | || | ||| ||||| || Sbjct 106680 GTTACCAGTCTCGGTCTGCGCCTCGAGAATGGCATACCAAAGC---TTCTGGGCACGGAC 106736 Query 145825 CTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACC 145884 | | || ||| | ||||| |||||||||||| ||| | ||| Sbjct 106737 GGTTTCACGACCACGATTCTCCTTCTCGTAGCGGTGGTAGAGCTCCTCGAACTCATCACC 106796 Query 145885 GTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGC 145944 ||| ||||| || || ||| || |||||||| | ||||| |||| | || || | Sbjct 106797 GTAAACATCGGCAAGACCAGGAGCCTCATTGGGACAGAACAGCGTCCATTCACCATTCTC 106856 Query 145945 GTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTT 146004 | |||||||| ||| || | ||| || | ||||| ||||| | | || || || Sbjct 106857 TTGGACGCGCTTCATGAAGAGATCGGGGATCCACAAAGCGTAGAAGAGATCACGAGC--- 106913 Query 146005 GCAATCCTCAGC--ACCCATGTTTC--GCTTCAAATTAAGCACACTATAGATGTCCGCGT 146060 || |||| | || || ||| || ||| | ||| | | ||| || |||| Sbjct 106914 GCGGACCTCTTCCTTGCCGTGGTTCTTGC-GCAAGTCAAGGAAGCCGAAGACATCGGCGT 106972 Query 146061 GCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGT 146117 |||| || |||| ||||| ||| | ||| || || |||||||||||||| |||| Sbjct 106973 GCCATGGCTCAAGATAGATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCAACGT 107032 Query 146118 GACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCG 146177 |||| | ||||||| |||| || | ||| || || || | | ||||| | Sbjct 107033 AACGTGCTGTGTTGTTGTAGACACGGAGCATAGGAATGAGACCATTCGAAGTTCCGTTGG 107092 Query 146178 TAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCC-G 146236 | || || ||| || || | | ||| || || | ||| | |||||| | Sbjct 107093 TGCCACCGATGTAGGAGCCTGTGGCACGGATACGATGCACGTTGAGGCCAATACCGCCAG 107152 Query 146237 CCGTACTTGGATATAGCGGCGCA-GTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC 146295 | || |||||| || ||| || ||| | || || |||||||| ||||||||||| || Sbjct 107153 CAGT-CTTGGAGATCAAGGCACAGGTCTTC-AGTGTGTCGTAGATACCGTCAATGCTGTC 107210 Query 146296 GCTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGAA 146355 | ||| | | || ||||| ||| ||||||| | || || || || ||| Sbjct 107211 CTCTTTCATGTCAATGAGGAAGCAGGAGGACATCTGAGGGGATGGAGTGCCTGCGTTGAA 107270 Query 146356 CAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCAT-CATCCGATACGTTTCGATAG 146414 | |||||| ||||| ||||| || | ||| | || ||||| || || | Sbjct 107271 GAGCGTCGGCGAGGCGTGTGTAAAGTACTTCTGTGACATGTAGTCG-TACGTCTCAATGG 107329 Query 146415 CGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCC 146474 | | | ||||| | ||| |||||||| | |||||| ||||| ||||||||||| || | Sbjct 107330 CCTTCTCGATGTCATTGCCGTGAATGCCGACAGCGACACGCATCAGCATGTGTTGTGGAC 107389 Query 146475 GCTCCGCCAC 146484 |||| || || Sbjct 107390 GCTCGGCAAC 107399 >seq6 Length=1708680 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || || | ||| | |||||| ||||| || |||||||| || | Sbjct 771406 CCACCACGGAGGCGGAGGACGAGATGGAGGGTCGATTCCTTCTGGATGTTGTAGTCCGAC 771465 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||||| ||||| ||||||||||| ||| |||| || ||||||||||| ||||| Sbjct 771466 AGGGTGCGCCCATCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGAGGA 771525 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || ||| || ||||| | || | |||||| | ||||||| Sbjct 771526 ATGCCCTCCTTATCCTGGATCTTGCTCTTGACATTGTCGATAGTATCCGAAGACTCGACC 771585 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| ||||| || || ||||| ||||| |||||||| Sbjct 771586 TCCAAGGTGATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 771632 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || || | || | ||| |||||||||||||||||||||||| Sbjct 771634 CCACCACGGAGGCGGAGGACGAGGTGGAGGGTTGACTCCTTTTGAATGTTGTAATCGGAG 771693 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||| || ||||||||||| ||| |||| || ||||||||||| |||||| Sbjct 771694 AGGGTGCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGAGGG 771753 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || ||| || ||||| | || | ||| || | |||||| | Sbjct 771754 ATGCCCTCCTTATCCTGGATCTTGCTCTTGACGTTGTCGATAGTGTCCGAGGACTCAACC 771813 Query 131188 TCGACGGTAACGGTTTTACCGGT 131210 |||| || | ||| || || || Sbjct 771814 TCGAGCGTGATGGTCTTGCCCGT 771836 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || || || | || || ||||| ||||||||||| || Sbjct 771178 CCACCACGGAGACGAAGAACCAAGTGGAGTGTAGATTCCTTCTGAATGTTGTAGTCAGAG 771237 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| |||||||| |||||| |||| || |||||||| || || || Sbjct 771238 AGAGTGCGACCGTCCTCGAGCTGCTTTCCTGCGAAGATCAAGCGCTGCTGATCTGGGGGA 771297 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| |||||| ||| | | || | ||||| | || |||| Sbjct 771298 ATACCCTCCTTGTCTTGGATTTTGCTCTTTACGTTATCAATGGTATCTGACGATTCGACC 771357 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | ||| || || || ||||| || ||||| || ||||| Sbjct 771358 TCGAGGGTGATGGTCTTTCCTGTGAGAGTCTTGACGAAGATTTGCAT 771404 >seq29 Length=430389 Score = 98.7 bits (108), Expect = 9e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || || || || | |||||||||||| || |||||||| ||| Sbjct 67608 CCACCACGGAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 67549 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || |||||| ||||||||||| ||| |||| | ||||||||||| || || Sbjct 67548 AGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGA 67489 Query 131128 ATTCCTTCTTTGTC 131141 ||||| || ||||| Sbjct 67488 ATTCCCTCCTTGTC 67475 >seq18 Length=888533 Score = 98.7 bits (108), Expect = 9e-16 Identities = 305/461 (66%), Gaps = 21/461 (5%) Strand=Plus/Minus Query 46144 ACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGT 46203 ||||||||| | ||| | || || ||||| ||||||||| |||| || ||| Sbjct 234791 ACTTTCGCCAACCGTCTCGTCGCATTTGCTGCCGTGGAGGGCATCTTCTTCAGCGGCTCC 234732 Query 46204 TTTGCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAA 46262 ||||| ||||||||| |||| || | || | | ||||| || ||||| || ||| Sbjct 234731 TTTGCGTCCATCTTTTGGCTCAAGAAGCGTGGTC-TGATGCCAGGTCTGACATTCTCCAA 234673 Query 46263 CGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACAC 46322 |||||| || || ||||||||||| ||||||| || || || || || || | | Sbjct 234672 CGAGCTCATCTCCCGCGACGAGGGTATGCATACTGATTTCGCATGCCTGCTCT---TCTC 234616 Query 46323 TCGCGTGCACGACAAGCTTGCGCC-----CGACACCGTGCTGAGCATGTTCAAGGAGGCG 46377 || | | | |||| | || || || | || | | ||| ||| ||||| Sbjct 234615 TC---TTCTCAACAACC--GCCCCAGCAAGGAGTCTGTCCAGGCCATCATCACTGAGGCT 234561 Query 46378 GTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAAC 46437 || | |||||| | ||||| || | | || || ||| || || || || |||||| Sbjct 234560 GTCACAATTGAGCAAGAGTTCTTGAGCGAGGCTCTCCCCTGCGCACTTCTTGGTATGAAC 234501 Query 46438 G-CACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCT-TC 46495 | ||| | |||||| | ||||| ||||| || || || || ||||| || ||| || Sbjct 234500 GCCACCCT-TATGTGCCAGTACATTGAGTTCGTTGCCGATCGCCTGCTGTTG--GCTCTC 234444 Query 46496 ACCAGC-CGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTG 46554 || | | ||| | | || ||| || || || || ||| | |||||||| || Sbjct 234443 GGCAACACCAAGGTCTACAATGCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTA 234384 Query 46555 GAGGGCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 | ||||| || || || ||||| ||||| || || || || Sbjct 234383 GCTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGATTA 234343 >seq16 Length=934283 Score = 91.5 bits (100), Expect = 1e-13 Identities = 105/140 (75%), Gaps = 1/140 (1%) Strand=Plus/Plus Query 131003 ATGA-GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAA 131061 |||| |||||| || | ||| || || || || | || |||||||| || |||||||| Sbjct 373737 ATGATGCCACCACGGAGACGGAGGACCAAGTGGAGCGTTGACTCCTTCTGGATGTTGTAG 373796 Query 131062 TCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCC 131121 ||| | ||||| |||||| ||||||||||| ||| |||| | |||||||||||| Sbjct 373797 TCGGAGAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCC 373856 Query 131122 GGAGGGATTCCTTCTTTGTC 131141 || || || || || || || Sbjct 373857 GGGGGAATGCCCTCCTTATC 373876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012392888960