Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq17 192 6e-44
seq6 140 3e-28
seq29 98.7 9e-16
seq18 98.7 9e-16
seq16 91.5 1e-13
>seq17
Length=926260
Score = 192 bits (212), Expect = 6e-44
Identities = 925/1450 (64%), Gaps = 43/1450 (3%)
Strand=Plus/Plus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
|||||||| || ||||| || || | |||||| || | || | ||| || ||| | ||
Sbjct 105970 TTGACGACTTGGAACTCACCAGCGAGCACACGGCGGGAGTAGATGTTCGATGTGTATGGC 106029
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
||||| ||||||| || || ||||| |||| ||| | ||| || |||||| || | |
Sbjct 106030 TCAAAGCACTCGTTGTTTCCGAGGATCTGAGAGGTAGATGCAGTTGGCATGGGTGCAATC 106089
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237
|| | || ||||| | || |||| || | ||||| || | |||| |||||
Sbjct 106090 AAAAGAGAGTTGCGAACACCATGCTGAGCAATCTTCTCCTTCAGGGAGGCCCAGTCCCAC 106149
Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCT----CGCTGGCGGG 145293
|| ||| || |||| | ||||||||||||||| | ||| |||| | ||||||
Sbjct 106150 AGATCAGTAGGAGTCACATTCCACATGTCGTACTGAAGAATACCCTGAGACACTGGCG-- 106207
Query 145294 GCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTT--TTGGCGAGCTCGCAACTCGCCTCC 145351
|| | ||| ||| || || |||| ||||||| || ||| |
Sbjct 106208 --AACCCTCGTAGGTCTGGTA--TGGGCCGAGTTCCTTGGCGATGTCACAAGATGAAGTG 106263
Query 145352 AGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGC-T 145410
|| ||| || || || || ||| || || |||||||| | | || || | ||
Sbjct 106264 AGGGCGGCGTGGTAGATGGTTTCGAAGATCTGGATGTTGAGCTTCTTGGCCTC-TGGCGA 106322
Query 145411 CTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGAT 145470
|||| | |||| |||||| | |||||||| || || || || | |||| ||| ||
Sbjct 106323 CTCGAAGGGCAAGCGCAGAGCCAGGAAAGCATCAGCAAGACCTTGGACACCCATGCCAAT 106382
Query 145471 GGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGAT 145530
|||| || | |||||| | ||| ||||| || || | || |||||
Sbjct 106383 AGGCCTGTGGCGGAAGTTGCTGCGACGTGCCTCCTCGACTGGGTAGTGGTTGACCTCGAT 106442
Query 145531 AATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAA 145590
|| || ||||| || || || |||| || | | | | ||||| ||||| ||
Sbjct 106443 GATCTTGTTCAAATTGCGAGTGACAACCTGGGTGACCTCGTGAAGCTTTTGGAAGTCGAA 106502
Query 145591 C---CGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAAC 145647
| | | || || | | ||| || || || | || || | ||| || ||
Sbjct 106503 CTCGCCACGCTTGTAA---TCAACAAAGGATGGGAGAGCAAGGGAAGCAAGATTGCAGAC 106559
Query 145648 TGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGAT 145707
||| ||| || | | |||| | | |||||| | ||| | ||| | | |||
Sbjct 106560 AGCCACCTCGTCAGGAGCAGTGTACTCGATGATCTCAGTGCAGAGGTTGGAGCTTCGGAT 106619
Query 145708 GGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGG 145767
|| ||||| || | ||| || || ||||||||||| |||||||||||||||||| | ||
Sbjct 106620 AGTACCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGAAAGG 106679
Query 145768 TCCGCCAGTCTCCACCTGCGTCTCCACGAT---AAAACGGTGCAAGTCCTGCGCACGCAC 145824
|||||||| ||||| ||| | || | | | || | ||| ||||| ||
Sbjct 106680 GTTACCAGTCTCGGTCTGCGCCTCGAGAATGGCATACCAAAGC---TTCTGGGCACGGAC 106736
Query 145825 CTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACC 145884
| | || ||| | ||||| |||||||||||| ||| | |||
Sbjct 106737 GGTTTCACGACCACGATTCTCCTTCTCGTAGCGGTGGTAGAGCTCCTCGAACTCATCACC 106796
Query 145885 GTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGC 145944
||| ||||| || || ||| || |||||||| | ||||| |||| | || || |
Sbjct 106797 GTAAACATCGGCAAGACCAGGAGCCTCATTGGGACAGAACAGCGTCCATTCACCATTCTC 106856
Query 145945 GTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTT 146004
| |||||||| ||| || | ||| || | ||||| ||||| | | || || ||
Sbjct 106857 TTGGACGCGCTTCATGAAGAGATCGGGGATCCACAAAGCGTAGAAGAGATCACGAGC--- 106913
Query 146005 GCAATCCTCAGC--ACCCATGTTTC--GCTTCAAATTAAGCACACTATAGATGTCCGCGT 146060
|| |||| | || || ||| || ||| | ||| | | ||| || ||||
Sbjct 106914 GCGGACCTCTTCCTTGCCGTGGTTCTTGC-GCAAGTCAAGGAAGCCGAAGACATCGGCGT 106972
Query 146061 GCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGT 146117
|||| || |||| ||||| ||| | ||| || || |||||||||||||| ||||
Sbjct 106973 GCCATGGCTCAAGATAGATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCAACGT 107032
Query 146118 GACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCG 146177
|||| | ||||||| |||| || | ||| || || || | | ||||| |
Sbjct 107033 AACGTGCTGTGTTGTTGTAGACACGGAGCATAGGAATGAGACCATTCGAAGTTCCGTTGG 107092
Query 146178 TAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCC-G 146236
| || || ||| || || | | ||| || || | ||| | |||||| |
Sbjct 107093 TGCCACCGATGTAGGAGCCTGTGGCACGGATACGATGCACGTTGAGGCCAATACCGCCAG 107152
Query 146237 CCGTACTTGGATATAGCGGCGCA-GTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC 146295
| || |||||| || ||| || ||| | || || |||||||| ||||||||||| ||
Sbjct 107153 CAGT-CTTGGAGATCAAGGCACAGGTCTTC-AGTGTGTCGTAGATACCGTCAATGCTGTC 107210
Query 146296 GCTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGAA 146355
| ||| | | || ||||| ||| ||||||| | || || || || |||
Sbjct 107211 CTCTTTCATGTCAATGAGGAAGCAGGAGGACATCTGAGGGGATGGAGTGCCTGCGTTGAA 107270
Query 146356 CAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCAT-CATCCGATACGTTTCGATAG 146414
| |||||| ||||| ||||| || | ||| | || ||||| || || |
Sbjct 107271 GAGCGTCGGCGAGGCGTGTGTAAAGTACTTCTGTGACATGTAGTCG-TACGTCTCAATGG 107329
Query 146415 CGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCC 146474
| | | ||||| | ||| |||||||| | |||||| ||||| ||||||||||| || |
Sbjct 107330 CCTTCTCGATGTCATTGCCGTGAATGCCGACAGCGACACGCATCAGCATGTGTTGTGGAC 107389
Query 146475 GCTCCGCCAC 146484
|||| || ||
Sbjct 107390 GCTCGGCAAC 107399
>seq6
Length=1708680
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || || || | ||| | |||||| ||||| || |||||||| || |
Sbjct 771406 CCACCACGGAGGCGGAGGACGAGATGGAGGGTCGATTCCTTCTGGATGTTGTAGTCCGAC 771465
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||||| ||||| ||||||||||| ||| |||| || ||||||||||| |||||
Sbjct 771466 AGGGTGCGCCCATCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGAGGA 771525
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || || || ||| || ||||| | || | |||||| | |||||||
Sbjct 771526 ATGCCCTCCTTATCCTGGATCTTGCTCTTGACATTGTCGATAGTATCCGAAGACTCGACC 771585
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | ||| ||||| || || ||||| ||||| ||||||||
Sbjct 771586 TCCAAGGTGATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 771632
Score = 114 bits (126), Expect = 1e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || || || | || | ||| ||||||||||||||||||||||||
Sbjct 771634 CCACCACGGAGGCGGAGGACGAGGTGGAGGGTTGACTCCTTTTGAATGTTGTAATCGGAG 771693
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||| || ||||||||||| ||| |||| || ||||||||||| ||||||
Sbjct 771694 AGGGTGCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGAGGG 771753
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || || || ||| || ||||| | || | ||| || | |||||| |
Sbjct 771754 ATGCCCTCCTTATCCTGGATCTTGCTCTTGACGTTGTCGATAGTGTCCGAGGACTCAACC 771813
Query 131188 TCGACGGTAACGGTTTTACCGGT 131210
|||| || | ||| || || ||
Sbjct 771814 TCGAGCGTGATGGTCTTGCCCGT 771836
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || || || | || || ||||| ||||||||||| ||
Sbjct 771178 CCACCACGGAGACGAAGAACCAAGTGGAGTGTAGATTCCTTCTGAATGTTGTAGTCAGAG 771237
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| |||||| |||||||| |||||| |||| || |||||||| || || ||
Sbjct 771238 AGAGTGCGACCGTCCTCGAGCTGCTTTCCTGCGAAGATCAAGCGCTGCTGATCTGGGGGA 771297
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| |||||| ||| | | || | ||||| | || ||||
Sbjct 771298 ATACCCTCCTTGTCTTGGATTTTGCTCTTTACGTTATCAATGGTATCTGACGATTCGACC 771357
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| ||| | ||| || || || ||||| || ||||| || |||||
Sbjct 771358 TCGAGGGTGATGGTCTTTCCTGTGAGAGTCTTGACGAAGATTTGCAT 771404
>seq29
Length=430389
Score = 98.7 bits (108), Expect = 9e-16
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || || || || || | |||||||||||| || |||||||| |||
Sbjct 67608 CCACCACGGAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 67549
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || |||||| ||||||||||| ||| |||| | ||||||||||| || ||
Sbjct 67548 AGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGA 67489
Query 131128 ATTCCTTCTTTGTC 131141
||||| || |||||
Sbjct 67488 ATTCCCTCCTTGTC 67475
>seq18
Length=888533
Score = 98.7 bits (108), Expect = 9e-16
Identities = 305/461 (66%), Gaps = 21/461 (5%)
Strand=Plus/Minus
Query 46144 ACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGT 46203
||||||||| | ||| | || || ||||| ||||||||| |||| || |||
Sbjct 234791 ACTTTCGCCAACCGTCTCGTCGCATTTGCTGCCGTGGAGGGCATCTTCTTCAGCGGCTCC 234732
Query 46204 TTTGCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAA 46262
||||| ||||||||| |||| || | || | | ||||| || ||||| || |||
Sbjct 234731 TTTGCGTCCATCTTTTGGCTCAAGAAGCGTGGTC-TGATGCCAGGTCTGACATTCTCCAA 234673
Query 46263 CGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACAC 46322
|||||| || || ||||||||||| ||||||| || || || || || || | |
Sbjct 234672 CGAGCTCATCTCCCGCGACGAGGGTATGCATACTGATTTCGCATGCCTGCTCT---TCTC 234616
Query 46323 TCGCGTGCACGACAAGCTTGCGCC-----CGACACCGTGCTGAGCATGTTCAAGGAGGCG 46377
|| | | | |||| | || || || | || | | ||| ||| |||||
Sbjct 234615 TC---TTCTCAACAACC--GCCCCAGCAAGGAGTCTGTCCAGGCCATCATCACTGAGGCT 234561
Query 46378 GTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAAC 46437
|| | |||||| | ||||| || | | || || ||| || || || || ||||||
Sbjct 234560 GTCACAATTGAGCAAGAGTTCTTGAGCGAGGCTCTCCCCTGCGCACTTCTTGGTATGAAC 234501
Query 46438 G-CACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCT-TC 46495
| ||| | |||||| | ||||| ||||| || || || || ||||| || ||| ||
Sbjct 234500 GCCACCCT-TATGTGCCAGTACATTGAGTTCGTTGCCGATCGCCTGCTGTTG--GCTCTC 234444
Query 46496 ACCAGC-CGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTG 46554
|| | | ||| | | || ||| || || || || ||| | |||||||| ||
Sbjct 234443 GGCAACACCAAGGTCTACAATGCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTA 234384
Query 46555 GAGGGCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595
| ||||| || || || ||||| ||||| || || || ||
Sbjct 234383 GCTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGATTA 234343
>seq16
Length=934283
Score = 91.5 bits (100), Expect = 1e-13
Identities = 105/140 (75%), Gaps = 1/140 (1%)
Strand=Plus/Plus
Query 131003 ATGA-GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAA 131061
|||| |||||| || | ||| || || || || | || |||||||| || ||||||||
Sbjct 373737 ATGATGCCACCACGGAGACGGAGGACCAAGTGGAGCGTTGACTCCTTCTGGATGTTGTAG 373796
Query 131062 TCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCC 131121
||| | ||||| |||||| ||||||||||| ||| |||| | ||||||||||||
Sbjct 373797 TCGGAGAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCC 373856
Query 131122 GGAGGGATTCCTTCTTTGTC 131141
|| || || || || || ||
Sbjct 373857 GGGGGAATGCCCTCCTTATC 373876
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472012392888960
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