Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016- 05-18] 69 sequences; 38,501,010 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq14 104 2e-17 >seq14 Length=964506 Score = 104 bits (114), Expect = 2e-17 Identities = 206/303 (68%), Gaps = 4/303 (1%) Strand=Plus/Plus Query 6187 ATGTGGCGGACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTA 6246 |||| | ||| | |||||||||||||| ||| ||| ||| ||||| | || || | Sbjct 801289 ATGTCACCGACCCCTTCTACCGCTACAAGATGGAGCGTATCCAGTCCAAGATTGAAGGCA 801348 Query 6247 AGGGAAACGGTATTAAAACCGTCATTGTCAACATGCCTGAA--GTCGCTAAGGCGCTCGG 6304 |||| ||||| || |||||||||||||||||| | | | | ||||| || | |||| Sbjct 801349 AGGGCAACGGCATCAAAACCGTCATTGTCAACCT--CAGCAGCGTCGCCCAGTCACTCGC 801406 Query 6305 ACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTT 6364 ||||| | | || | || || ||||| | || || || || ||||| | Sbjct 801407 CCGCCCCCCTGCTCACGTCATCAAGTACTTCGGCTTTGAGCTCGGAGCCCAGACCAACAC 801466 Query 6365 TGATCACAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGA 6424 | | ||| |||| |||| ||| | ||||| | || || | |||||| ||||| Sbjct 801467 GAACCCCAACGACGACCGCTGGATCATCAACGGCGCCCACGACGCCAGCAAGCTCCAGGA 801526 Query 6425 CTTACTTGACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGAC 6484 || || || ||||| || ||||||||| || || | | ||| | ||||| ||||| Sbjct 801527 CTACCTCGATGGCTTCATCTCCAAGTTTGTCCTCTGCAAGAAGTGCAAGAACCCCGAGAC 801586 Query 6485 CGA 6487 ||| Sbjct 801587 CGA 801589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334946918330339