Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq14 104 2e-17
>seq14
Length=964506
Score = 104 bits (114), Expect = 2e-17
Identities = 206/303 (68%), Gaps = 4/303 (1%)
Strand=Plus/Plus
Query 6187 ATGTGGCGGACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTA 6246
|||| | ||| | |||||||||||||| ||| ||| ||| ||||| | || || |
Sbjct 801289 ATGTCACCGACCCCTTCTACCGCTACAAGATGGAGCGTATCCAGTCCAAGATTGAAGGCA 801348
Query 6247 AGGGAAACGGTATTAAAACCGTCATTGTCAACATGCCTGAA--GTCGCTAAGGCGCTCGG 6304
|||| ||||| || |||||||||||||||||| | | | | ||||| || | ||||
Sbjct 801349 AGGGCAACGGCATCAAAACCGTCATTGTCAACCT--CAGCAGCGTCGCCCAGTCACTCGC 801406
Query 6305 ACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTT 6364
||||| | | || | || || ||||| | || || || || ||||| |
Sbjct 801407 CCGCCCCCCTGCTCACGTCATCAAGTACTTCGGCTTTGAGCTCGGAGCCCAGACCAACAC 801466
Query 6365 TGATCACAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGA 6424
| | ||| |||| |||| ||| | ||||| | || || | |||||| |||||
Sbjct 801467 GAACCCCAACGACGACCGCTGGATCATCAACGGCGCCCACGACGCCAGCAAGCTCCAGGA 801526
Query 6425 CTTACTTGACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGAC 6484
|| || || ||||| || ||||||||| || || | | ||| | ||||| |||||
Sbjct 801527 CTACCTCGATGGCTTCATCTCCAAGTTTGTCCTCTGCAAGAAGTGCAAGAACCCCGAGAC 801586
Query 6485 CGA 6487
|||
Sbjct 801587 CGA 801589
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334946918330339
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |