Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq6 98.7 9e-16
>seq6
Length=1708680
Score = 98.7 bits (108), Expect = 9e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| |||||||| || | ||||| | || || |||||||||
Sbjct 771176 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACAATCACTCTAGAGGTTGAGTCGTCT 771117
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| ||||| | ||| || || || || || || || || || || ||
Sbjct 771116 GACACCATCGACAACGTAAAGAGCAAGATTCAAGATAAGGAGGGCATCCCTCCCGATCAG 771057
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| |||| || || || ||||| | || || | ||||||| | || ||||||
Sbjct 771056 CAGCGCCTTATCTTCGCGGGTAAACAGCTCGAGGACGGTCGCACTCTTTCGGACTACAAT 770997
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| ||||| || ||||| || || || |||||
Sbjct 770996 ATCCAAAAGGAGTCCACTCTGCACTTGGTGCT 770965
Score = 84.2 bits (92), Expect = 2e-11
Identities = 120/169 (71%), Gaps = 0/169 (0%)
Strand=Plus/Minus
Query 25033 CCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTG 25092
||||||| |||| || ||||| || ||||||||||| | ||| || ||| |
Sbjct 771826 CCATCACGCTCGAGGTTGAGTCCTCGGACACTATCGACAACGTCAAGAGCAAGATCCAGG 771767
Query 25093 ACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAG 25152
| || || || || || |||||||| ||||| | || || |||||||| || | ||||
Sbjct 771766 ATAAGGAGGGCATCCCTCCTGACCAGCAGCGCTTGATCTTCGCCGGCAAGCAGCTCGAAG 771707
Query 25153 ATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACA 25201
| | ||||| | ||||||||| |||||||| || || || || ||
Sbjct 771706 ACGGCCGCACCCTCTCCGATTACAACATTCAAAAGGAGTCAACCCTCCA 771658
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327635598235
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |