Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016- 05-18] 69 sequences; 38,501,010 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq18 91.5 3e-13 >seq18 Length=888533 Score = 91.5 bits (100), Expect = 3e-13 Identities = 254/378 (67%), Gaps = 15/378 (4%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| | || ||||| ||||||||||||||||||||| ||| Sbjct 234361 TCGAAGAAGTTGGTCTTGCCAGCTAGCGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTG 234420 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 |||||||| ||||| | ||| || || | | | ||| || || || ||||| | Sbjct 234421 GCATTGTAGACCTTGGTGTTGCCGAGAGCCAACAGCAGGCGATCGGCAACGAACTCAATG 234480 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCA-TACGACAAGGAATTGCCTCACAGAT 251741 ||||| | ||| || | |||||| |||| | | || || || | ||||| | | Sbjct 234481 TACTGGCACATAAGGGTGGCGTTCATACCAAGAAGTGCG-CAGGGGAGAGCCTCGCTCAA 234539 Query 251742 GAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCAC---CT-GTGCCAGAG 251797 ||| || | || | | || ||||| | || |||| || || | | | | Sbjct 234540 GAACTCTTGCTCAATTGTGACAGCCTCAGTGATGATGGCCTGGACAGACTCCTTGCTGGG 234599 Query 251798 ACAGCTTGTTCTCCAGCTTTGAGTACAGGA-GCTCGCCAAA-CTGTTGGTGCAGACCCTC 251855 | | ||||| || ||| | || | || || ||| | || |||| |||||| Sbjct 234600 GC-GGTTGTT---GAGAAGAGAGAAGAGCAGGCATGCGAAATCAGT--ATGCATACCCTC 234653 Query 251856 GTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAG 251915 |||||| ||||| ||||||||| | ||| || ||||||| ||||| ||| |||| Sbjct 234654 GTCGCGGGAGATGAGCTCGTTGGAGAATGTCAGACCTGGCATCAGACCACGCTTCTTGAG 234713 Query 251916 CCAGAAGATTG-CGCAAA 251932 ||| ||||| | |||||| Sbjct 234714 CCAAAAGATGGACGCAAA 234731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027835891328029