Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq18 91.5 3e-13
>seq18
Length=888533
Score = 91.5 bits (100), Expect = 3e-13
Identities = 254/378 (67%), Gaps = 15/378 (4%)
Strand=Plus/Plus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | |||||| | || ||||| ||||||||||||||||||||| |||
Sbjct 234361 TCGAAGAAGTTGGTCTTGCCAGCTAGCGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTG 234420
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
|||||||| ||||| | ||| || || | | | ||| || || || ||||| |
Sbjct 234421 GCATTGTAGACCTTGGTGTTGCCGAGAGCCAACAGCAGGCGATCGGCAACGAACTCAATG 234480
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCA-TACGACAAGGAATTGCCTCACAGAT 251741
||||| | ||| || | |||||| |||| | | || || || | ||||| | |
Sbjct 234481 TACTGGCACATAAGGGTGGCGTTCATACCAAGAAGTGCG-CAGGGGAGAGCCTCGCTCAA 234539
Query 251742 GAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCAC---CT-GTGCCAGAG 251797
||| || | || | | || ||||| | || |||| || || | | | |
Sbjct 234540 GAACTCTTGCTCAATTGTGACAGCCTCAGTGATGATGGCCTGGACAGACTCCTTGCTGGG 234599
Query 251798 ACAGCTTGTTCTCCAGCTTTGAGTACAGGA-GCTCGCCAAA-CTGTTGGTGCAGACCCTC 251855
| | ||||| || ||| | || | || || ||| | || |||| ||||||
Sbjct 234600 GC-GGTTGTT---GAGAAGAGAGAAGAGCAGGCATGCGAAATCAGT--ATGCATACCCTC 234653
Query 251856 GTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAG 251915
|||||| ||||| ||||||||| | ||| || ||||||| ||||| ||| ||||
Sbjct 234654 GTCGCGGGAGATGAGCTCGTTGGAGAATGTCAGACCTGGCATCAGACCACGCTTCTTGAG 234713
Query 251916 CCAGAAGATTG-CGCAAA 251932
||| ||||| | ||||||
Sbjct 234714 CCAAAAGATGGACGCAAA 234731
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027835891328029
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |