Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq6 86.0 5e-12
>seq6
Length=1708680
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | ||| || || | |||||||| || ||||||||||| ||
Sbjct 771175 ATACCACCACGGAGACGAAGAACCAAGTGGAGTGTAGATTCCTTCTGAATGTTGTAGTCA 771234
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||| ||| || || || || || || ||| |||| | ||||| || || ||
Sbjct 771235 GAGAGAGTGCGACCGTCCTCGAGCTGCTTTCCTGCGAAGATCAAGCGCTGCTGATCTGGG 771294
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| || || ||||| || || |||| | |||| ||| || | ||||||
Sbjct 771295 GGAATACCCTCCTTGTCTTGGATTTTGCTCTTTACGTTATCAATGGTATCTGACGATTCG 771354
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | || || || || ||||| || || || || |||||
Sbjct 771355 ACCTCGAGGGTGATGGTCTTTCCTGTGAGAGTCTTGACGAAGATTTGCAT 771404
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | || | ||| | || ||||| || || |||||||| ||
Sbjct 771403 ATACCACCACGGAGGCGGAGGACGAGATGGAGGGTCGATTCCTTCTGGATGTTGTAGTCC 771462
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || ||| ||||| || || |||||| |||| | ||||| ||||| |||
Sbjct 771463 GACAGGGTGCGCCCATCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGA 771522
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|||||||| || || || ||||| || | | || | || || | || |||
Sbjct 771523 GGAATGCCCTCCTTATCCTGGATCTTGCTCTTGACATTGTCGATAGTATCCGAAGACTCG 771582
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| ||| | || || || || || ||||| || || ||||||||
Sbjct 771583 ACCTCCAAGGTGATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 771632
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420134046693228
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |