Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq17 228 2e-54
seq18 215 1e-50
>seq17
Length=926260
Score = 228 bits (252), Expect = 2e-54
Identities = 725/1109 (65%), Gaps = 30/1109 (3%)
Strand=Plus/Plus
Query 244340 CCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACA-GCTCTCGTCGAGGGC 244398
|||||||||||| |||| || ||| || ||| | | ||| | | || ||||||
Sbjct 106210 CCCTCGTAGGTCTGGTATGGGCCGAGTTCCTTGGCGATGTCACAAGATGAAGT-GAGGGC 106268
Query 244399 GGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCT-TGCCGCAGGTGA 244457
||||| ||||||||| ||||||||| |||| | | ||||| || || | ||
Sbjct 106269 GGCGTGGTAGATGGTTTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCTGGCG-ACTCGA 106327
Query 244458 AGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTC 244517
|||| | || || || ||| | || || || || || || || ||||| || || |
Sbjct 106328 AGGGCAAGCGCAGAGCCAGGAAAGCATCAGCAAGACCTTGGACACCCATGCCAATAGGCC 106387
Query 244518 TGTGTCGCTTGTTGGAGCG-CATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACC 244576
|||| || |||| ||| | || || | | || ||||| |||| | ||||| | |
Sbjct 106388 TGTGGCGGAAGTTGCTGCGACGTGCCTCCTCG-ACTGGGTAGTGGTTGACCTCGATGATC 106446
Query 244577 TTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCG 244636
||||| | ||||| |||| | || ||| ||| ||| || |||||| |||||
Sbjct 106447 TTGTTCAAATTGCGAGTGACAACCTGGGTGACCTCGTGAAGCTTTTGGAAGTCGAACTCG 106506
Query 244637 TAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTG 244696
| || | || ||| || | | | ||| || | | || || |||
Sbjct 106507 ----------CCACGCTTGTAATCAACAAAGGATGG--GAGAGCAAGGGAAGCAAGATTG 106554
Query 244697 CAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCAC 244756
||||| |||||||| || | ||||||| || ||||| ||||||||||| ||
Sbjct 106555 CAGACAGCCACCTCGTCAGGAGCAGTGTACTCGATGATCTCAGTGCAGAGGTTGGAGCTT 106614
Query 244757 TTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATG 244816
||| || ||||||| || || ||| ||| |||||||||||||||||||||||||
Sbjct 106615 CGGATAGTACCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATG 106674
Query 244817 AAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTG 244876
|| || || |||||| ||| || |||| | | | ||| || | | || |
Sbjct 106675 AAAGGGTTACCAGTCTCGGTCTGCGCCTCGAGAATGGCATACCAAAGCTTCTGGGCACGG 106734
Query 244877 ACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGG 244936
|| || ||| | ||| |||||||||| ||| || ||||||||||
Sbjct 106735 ACGGTTTCACGACCACGATTCTCCTTCTCGTAGCGGTGGTAGAGCTCCTCGAACTCATCA 106794
Query 244937 CCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCG 244996
|| | || ||| | || || || | || || | || |||| || ||
Sbjct 106795 CCGTAAACATCGGCAAGACCAGGAGCCTCATTGGGACAGAACAGCGTCCATTCACCATTC 106854
Query 244997 TCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTC 245056
|| | ||| | || ||||||||| ||||||||||| | || | |||||| || | |
Sbjct 106855 TCTTGGACGCGCTTCATGAAGAGATCGGGGATCCACAAAGCGTAGAAGAGATCACGAGCG 106914
Query 245057 CTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGC 245116
| ||| ||| ||| |||||| | || || | ||| | ||||| ||| |||||
Sbjct 106915 CGGACCTCTTCCTTGCCGTGGTTCTTGCGCAAGTCAAGGAAGCCGAAGACATCGGCGTGC 106974
Query 245117 CAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCAC-CAT 245175
|| ||||| | |||| || | ||| ||||| ||||||||||| |||||||| || |
Sbjct 106975 CATGGCTCAAGATAGATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCAACGTAA 107034
Query 245176 CCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGT 245235
| | | | |||| ||| || || |||| | | || || || ||||||||
Sbjct 107035 CGTGCTGTG-TTGTTGTAGACACGGAGCATAGGAATGAGACCATTCGAAGTTCCGTTGGT 107093
Query 245236 GCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGAC----ATGCCTAGTCCGC 245291
||| |||||||| ||| || | | || | | |||| || | ||| | ||||
Sbjct 107094 GCCACCGATGTAGGAGCCTGTGGCAC---GGATAC-GATGCACGTTGAGGCCAATACCGC 107149
Query 245292 CGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGT 245351
| || ||||||||| | ||| ||| |||| | ||||| || || || |||||||
Sbjct 107150 CAGCAGTCTTGGAGATCAAGGCACAGGTCTTCAGTGTGTCGTAGATACCGTCAATGCTGT 107209
Query 245352 CCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTG-GGGCTTGGGGCTGCACGAGTTG 245410
|| ||||||| | || ||||||||||||| ||| ||| ||| | ||| | ||||
Sbjct 107210 CCTCTTTCATGTCAATGAGGAAGCAGGAGGACATCTGAGGGGATGGAG-TGCCTGCGTTG 107268
Query 245411 AACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439
|| || || || |||||| ||||||||
Sbjct 107269 AAGAGCGTCGGCGAGGCGTGTGTAAAGTA 107297
>seq18
Length=888533
Score = 215 bits (238), Expect = 1e-50
Identities = 369/524 (70%), Gaps = 25/524 (5%)
Strand=Plus/Minus
Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGA-CGCAAC 42691
|||||||| |||||||| || ||||| || |||||| | | || | | ||
Sbjct 234848 CCCTGCATTCGCAAGAAGGCTGATTGGGCCCTTCGATGGATCTCT-GACAAGAACTCTAC 234790
Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751
|||| | | | || || || ||| | ||||| ||||||||||||||| ||| ||||
Sbjct 234789 TTTCGCCAACCGTCTCGTCGCATTTGCTGCCGTGGAGGGCATCTTCTTCAGCGGCTCCTT 234730
Query 42752 CGCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACG 42810
|| |||||||| ||||||||| || ||| | |||||| || || || ||||| ||||
Sbjct 234729 TGCGTCCATCTTTTGGCTCAAGAAGCGTGGTCT-GATGCCAGGTCTGACATTCTCCAACG 234671
Query 42811 AACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCC 42870
| |||||| | | |||||||| |||||| || || || ||||| || ||||| |
Sbjct 234670 AGCTCATCTCCCGCGACGAGGGTATGCATACTGATTTCGCATGCCTGCTCTTCTC---TC 234614
Query 42871 ACCTCAGGCACAA--GCCCTCG-AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGG 42927
|||| |||| |||| | |||||| |||| |||||||||||| ||||| ||
Sbjct 234613 TTCTCA---ACAACCGCCCCAGCAAGGAGTCTGTCCAGGCCATCATCACTGAGGCTGTCA 234557
Query 42928 AGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACG 42987
|| ||| | |||||| | | || | || ||| | || | || |||||| |
Sbjct 234556 CAATTGAGCAAGAGTTCTTGAGCGAGGCTCTCCCCTGCGCACTTCTTGGTATGAACGCCA 234497
Query 42988 ACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCA 43047
||| |||||| ||||||| ||| ||| |||| ||| |||| | | ||| ||||
Sbjct 234496 CCCTTATGTGCCAGTACATTGAGTTCGTTGCCG---ATCGCCTG---CTGTTGGCTCTCG 234443
Query 43048 GC--CGCC----TCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGG 43101
|| | || ||||||| | | |||||||||||| ||||||||||||||| | |
Sbjct 234442 GCAACACCAAGGTCTACAATGCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTAG 234383
Query 43102 AGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145
|||||||||||||| ||||||||||| || | || ||||||
Sbjct 234382 CTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGATTACCAG 234339
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944338385507440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |