Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq6 136 9e-27
>seq6
Length=1708680
Score = 136 bits (150), Expect = 9e-27
Identities = 171/231 (74%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | ||| || | || | || ||| || || || || ||||| | |
Sbjct 771178 CCACCACGGAGACGAAGAACCAAGTGGAGTGTAGATTCCTTCTGAATGTTGTAGTCAGAG 771237
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| ||||| || | || |||||||||||||||| ||||| || |||||||
Sbjct 771238 AGAGTGCGACCGTCCTCGAGCTGCTTTCCTGCGAAGATCAAGCGCTGCTG---ATCTGGG 771294
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTC 288422
|| || || || || |||||||| ||| || ||||| || || | ||| ||||||
Sbjct 771295 GGAATACCCTCCTTGTCTTGGATTTT-GCTCTTTACGTTATCAATGGTATCTGACGATTC 771353
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||| ||||| ||||| || || |||||||||||||| || |||||
Sbjct 771354 GACCTCGAGGGTGATGGTCTTTCCTGTGAGAGTCTTGACGAAGATTTGCAT 771404
Score = 122 bits (134), Expect = 2e-22
Identities = 167/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303
||||| || || || | ||| || | || | ||| || ||||||||||| |||||
Sbjct 770947 TGTCCGCCACGCAGACGAAGCACCAAGTGCAGAGTGGACTCCTTTTGGATATTGTAGTCC 771006
Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363
| || ||||| ||||| || | ||||| || |||||||| || ||||| |||
Sbjct 771007 GAAAGAGTGCGACCGTCCTCGAGCTGTTTACCCGCGAAGATAAGGCGCTGCTGATCGGGA 771066
Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTC 288422
||||| || || ||||| || || || ||| || ||||| || || | || ||| ||
Sbjct 771067 GGGATGCCCTCCTTATCTTGAATCTT-GCTCTTTACGTTGTCGATGGTGTCAGACGACTC 771125
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || ||||| ||||| ||||||| ||||||||||| ||||||||
Sbjct 771126 AACCTCTAGAGTGATTGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 771176
Score = 107 bits (118), Expect = 5e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || |||||||| | || ||| || ||||| || ||||| |
Sbjct 771406 CCACCACGGAGGCGGAGGACGAGATGGAGGGTCGATTCCTTCTGGATGTTGTAGTCCGAC 771465
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || || || | || || || |||||||||| ||||| || | ||
Sbjct 771466 AGGGTGCGCCCATCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGAGGA 771525
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
|| || || ||||||||||| || ||| || || || || |||| ||| || || ||
Sbjct 771526 ATGCCCTCCTTATCCTGGATCTT-GCTCTTGACATTGTCGATAGTATCCGAAGACTCGAC 771584
Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| | ||||| ||||| || || || || |||||||| ||||||||
Sbjct 771585 CTCCAAGGTGATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 771632
Score = 104 bits (114), Expect = 6e-17
Identities = 147/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || ||||| || | || || ||||| || || || |||| |
Sbjct 771634 CCACCACGGAGGCGGAGGACGAGGTGGAGGGTTGACTCCTTTTGAATGTTGTAATCGGAG 771693
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| |||||||| | || || || |||||||||| ||||| || | |||
Sbjct 771694 AGGGTGCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGAGGG 771753
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
|| || || ||||||||||| || ||| || ||||| || |||| || || || ||
Sbjct 771754 ATGCCCTCCTTATCCTGGATCTT-GCTCTTGACGTTGTCGATAGTGTCCGAGGACTCAAC 771812
Query 288426 TTCGAGCGTGATCGTCTTCCCGGT 288449
||||||||||| ||||| || ||
Sbjct 771813 CTCGAGCGTGATGGTCTTGCCCGT 771836
Score = 86.0 bits (94), Expect = 1e-11
Identities = 97/130 (75%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 325107 GCTTCACATTATCTACGATGTCTTTAGGGTTGTAACTGGGAATGTTCGTCGACCATCCGG 325166
|| ||| || ||||||||||| | |||||||| | ||||| | | ||| ||||
Sbjct 489969 GCCTCAGGTTTTCTACGATGTCCATGGGGTTGTAGTTCGGAATTTCAGAGCTCCAACCGG 490028
Query 325167 TTCCGATACCACTCGATCCATTCACCAGGATACTCGGAATAACAGGCACATAATACTCTG 325226
|||| ||||||||||| ||||| || ||||| | ||||| ||||| ||||| ||| |
Sbjct 490029 TTCCAATACCACTCGAGCCATTGACGAGGATTGTGGGAATGACAGGAACATACATCTCCG 490088
Query 325227 GTTCGATCTT 325236
| ||||| ||
Sbjct 490089 GCTCGATTTT 490098
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179653357111782
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |