Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016- 05-18] 69 sequences; 38,501,010 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq18 98.7 2e-15 >seq18 Length=888533 Score = 98.7 bits (108), Expect = 2e-15 Identities = 173/252 (69%), Gaps = 0/252 (0%) Strand=Plus/Minus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 |||||||| || || || || || | || ||| | |||| ||| | || ||| Sbjct 234575 ATCATCACTGAGGCTGTCACAATTGAGCAAGAGTTCTTGAGCGAGGCTCTCCCCTGCGCA 234516 Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 ||| |||| |||||| | || ||| | |||||||| || ||||| ||||| ||| | Sbjct 234515 CTTCTTGGTATGAACGCCACCCTTATGTGCCAGTACATTGAGTTCGTTGCCGATCGCCTG 234456 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 | | || || || | || || ||||| ||| |||||||| | ||| |||||| Sbjct 234455 CTGTTGGCTCTCGGCAACACCAAGGTCTACAATGCCACCAACCCCTTCGACTTCATGGAG 234396 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGC 243741 ||| ||||| || || || ||||||||||| |||||||| ||||||| || Sbjct 234395 AACATCTCGCTAGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGATTACCAGAAG 234336 Query 243742 CCTGGTGTGATG 243753 ||||||| ||| Sbjct 234335 GCTGGTGTCATG 234324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879024985150