Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq17 289 3e-73
seq18 89.7 6e-13
seq6 82.4 9e-11
>seq17
Length=926260
Score = 289 bits (320), Expect = 3e-73
Identities = 1123/1740 (65%), Gaps = 35/1740 (2%)
Strand=Plus/Plus
Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656
|||||||||||||| ||||||||||| || ||||||| || | |||||||| |
Sbjct 105664 CGGAGGTAGTACATGCCCGTCTTGAGACCAAGCTTCCAACCAGCAAAGTGCATCGACGTG 105723
Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 113716
| |||| | || || | |||| || ||| | | || || ||||||||||||
Sbjct 105724 ATCTTGCCCATAGTAGGCTCCTTCATGTGGATGTTGAGAGACTGAGACTGATCGATGAAG 105783
Query 113717 CGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTT---GATTTCCCACACAGTT 113773
||||| || || ||||| | || | | ||| || ||||||||| |||||
Sbjct 105784 GCACCACGGTCAGCAGCCATCTGGATGA--TGGTTCG-CTGAGAGATTTCCCAAACAGTC 105840
Query 113774 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCC 113833
|||| || |||| | || || || || | || ||||||||||||||| |
Sbjct 105841 TTGTAAAGAGTCTTGGTCTCTTCAGGAATGTTGGGAATGCGTTGGATGGAGCCACCTTC- 105899
Query 113834 TTGACCATGA---GATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCC 113890
|| | |||| ||| |||||| | || ||||| ||||| || | |||||||
Sbjct 105900 -TG-CAATGATACGATTCTTCATGTTCTCAGACCACAGACCCATATCGACCAGATCCTTA 105957
Query 113891 ACGAG--ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATAT 113948
| || ||| | |||| || |||||||| ||||| || | ||||| |
Sbjct 105958 AGCAGCCATGGGT--TGACGACTTGGAACTCACCAGCGAGCACACGGCGGGAGTAGATGT 106015
Query 113949 TGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGG 114008
| | |||||||||||||||||||| ||||| || | ||| || | ||| || || || |
Sbjct 106016 TCGATGTGTATGGCTCAAAGCACTCGTTGTTTCCGAGGATCTGAGAGGTAGATGCAGTTG 106075
Query 114009 GCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGG 114068
|||||||||| || | ||| ||| || | ||| | | ||| ||||| ||||
Sbjct 106076 GCATGGGTGCAATCAAAAGAGAGTTGCGAACACCATGCTGAGCAATCTTCTCCTTCAGGG 106135
Query 114069 CGTCCCAGT--CGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACC 114126
| |||||| | || | || | | | | | |||||| || |||| || |||||
Sbjct 106136 AGGCCCAGTCCCACAGATCAG--TAGGAGTCACATTCCACATGTCGTACTGAAGAATACC 106193
Query 114127 TTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGA 114186
|| || ||||||| ||||| | |||| ||||||||| ||| || | || |
Sbjct 106194 CTGAGACACTGGCGAACCCTCGTAGGTCTGGTATGGGCCGAGTTCCTTGGCGATGTCACA 106253
Query 114187 GCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGC 114246
| |||||| ||||| || || || || || || | || | ||||||
Sbjct 106254 AGATGAAGTGAGGGCGGCGTGGTAGATGGTTTCGAAGATCTGGATGTTGAGCTTCTTGGC 106313
Query 114247 CTCGTCGGAATCAAACGCGAGTCGGCACA-AAATAAATACATCCGCGAGACCTTGGACAC 114305
||| || || || | | | ||| | | || |||| || |||||||||||||
Sbjct 106314 CTCTGGCGACTCGAAGGGCAAGC-GCAGAGCCAGGAAAGCATCAGCAAGACCTTGGACAC 106372
Query 114306 CGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAAT 114365
| | |||||| || | || | | || || || ||| || || || |
Sbjct 106373 CCATGCCAATAGGCCTGTGGCGGAAGTTGCTGCGACGTGCCTCCTCGACTGGGTAGTGGT 106432
Query 114366 TCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTT 114425
| ||||| | | | || | ||| |||||||||| |||| || ||||||||||
Sbjct 106433 TGACCTCGATGATCTTGTTCAAATTGCGAGTGACAACCTGGGTGACCTCGTGAAGCTTTT 106492
Query 114426 CGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGAT 114485
| | || || || | || | || ||| | || || || | || || ||||
Sbjct 106493 GGAAGTCGAACTCGCCACGCTTGTAATCAACAAAGGATGGGAGAGCAAGGGAAGCAAGAT 106552
Query 114486 TACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAAC 114545
| || |||| ||| || | |||||||||| || || || || || | || || |
Sbjct 106553 TGCAGACAGCCACCTCGTCAGGAGCAGTGTACTCGATGATCTCAGTGCAGAGGTTGGAGC 106612
Query 114546 TCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCA 114605
| || || |||| |||||| || || ||| |||| || || |||||||| ||||
Sbjct 106613 TTCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCA 106672
Query 114606 TGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCT 114664
|| | || | || ||||| || || | || |||||| || | ||| | | || | |||
Sbjct 106673 TGAAAGGGTTACCAGTCTCGGTCTGCGCCTCGAGAATGGCATACCAAAGCTTCTG-GGCA 106731
Query 114665 GGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTA-CTTTGTGTAGAGGGCTTCAAACTC 114723
| || || | | || ||||| |||||| | || |||||| | || |||||
Sbjct 106732 CGGACGGTTTCACGACCACGATTCTCCTTCTCGTAGCGGTG-GTAGAGCTCCTCGAACTC 106790
Query 114724 TTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACC 114783
||||| | || | || || || |||| || || ||||| || | ||||| |||
Sbjct 106791 ATCACCGTAAACATCGGCAAGACCAGGAGCCTCATTGGGACAGAACAGCGTCCATTCACC 106850
Query 114784 ACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCG 114843
| ||| | || |||||||||||||| || |||||||| | ||| |||||||||| ||
Sbjct 106851 ATTCTCTTGGACGCGCTTCATGAAGAGATCGGGGATCCACAAAGCGTAGAAGAGATCACG 106910
Query 114844 ACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGC 114903
| ||| | ||||| | || || || ||||| || | ||| | | || ||| ||
Sbjct 106911 AGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAAGTCAAGGAAGCCGAAGACATCGGC 106970
Query 114904 GTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTAC 114960
|||||| || || || || | || | | || ||| ||| |||||| ||
Sbjct 106971 GTGCCATGGCTCAAGATAGATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCAAC 107030
Query 114961 ATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATT 115020
|| | |||||| || | || || ||||| ||||||| ||||| || || ||
Sbjct 107031 GTAACGTGCTGTGTTGTTGTAGACACGGAGCATAGGAATGAGACCATTCGAAGTTCCGTT 107090
Query 115021 TGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCC 115078
|| || |||| || ||| || |||| | || | ||| | || | ||||||||
Sbjct 107091 GGTGCCACCGATGTAGGAGCCT--GTGGCACGGATACGATGCACGTTGAGGCCAATACCG 107148
Query 115079 CCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAG 115138
|| || ||| ||||| || || | | || || ||||||| ||||| || |
Sbjct 107149 CCAGCAGTCTTGGAGATCAAGGCACAGGTCTTCAGTGTGTCGTAGATACCGTCAATGCTG 107208
Query 115139 TCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTG 115198
|| | || | | || ||||||||| ||||| || || ||| || || ||||||
Sbjct 107209 TCCTCTTTCATGTCAATGAGGAAGCAGGAGGACATCTGAGGGGATGGAGTGCCTGCGTTG 107268
Query 115199 AAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAA 115257
||||| || || | ||||| | || ||| | || ||||| | ||||| ||||| |
Sbjct 107269 AAGAGCGTCGGCGAGGCGTGTGT-AAAGTACTTCTGTGACATGTAGTCGTACGTCTCAAT 107327
Query 115258 GACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGG 115317
| | ||||| | |||||||| |||| | ||| ||||| | ||||| ||| ||
Sbjct 107328 GGCCTTCTCGATGTCATTGCCGTGAATGCCGACAGCGACACGCATCAGCATGTGTTGTGG 107387
>seq18
Length=888533
Score = 89.7 bits (98), Expect = 6e-13
Identities = 99/132 (75%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 126064 ACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTT 126123
||||||||| ||||||||||| || || ||||| ||| |||||||| ||||| |||||
Sbjct 234648 ACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAATGTCAGACCTGGCATCAGACCACGCTT 234707
Query 126124 CTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAA 126183
||| | ||| || || | ||| || || ||||||||| |||||||| || ||
Sbjct 234708 CTTGAGCCAAAAGATGGACGCAAAGGAGCCGCTGAAGAAGATGCCCTCCACGGCAGCAAA 234767
Query 126184 CGCAAAGAGACG 126195
|| | ||||||
Sbjct 234768 TGCGACGAGACG 234779
>seq6
Length=1708680
Score = 82.4 bits (90), Expect = 9e-11
Identities = 244/369 (66%), Gaps = 17/369 (5%)
Strand=Plus/Plus
Query 10787 CGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCC 10846
||||| || || || || ||||| || ||| ||| || | ||| | |||| || ||
Sbjct 642607 CGATCGAAACGTCCGGGTCGGAGAAGAGCGGAGTCGAGCAAATCGGCGTGGTTAGTGGCG 642666
Query 10847 GCGATGACAACGATGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTGATTG 10906
|| |||| | || ||| || | ||| || ||||| | ||| | | ||||| ||
Sbjct 642667 GCTATGAAGATGACGCCGGTGCTTTGATCGAAACCATCGAGGTCATTGAGAAGTTGGTTC 642726
Query 10907 ATGGTTTGTTCGCGTTCATCATTCGCGGGCATACCACCCGCACTGCGTTGCTT---ACCG 10963
| |||||| ||| | || ||| ||||| ||| | ||| | |||| |||
Sbjct 642727 AGGGTTTG---GCGGTGATAATT----GGCAT--CACGGG-ACTT--TCGCTTTCCACCT 642774
Query 10964 ACGGCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTCACGGGCAACTTCAAAG 11023
|| ||||| | ||| || ||||| |||||| ||| || | || ||| | |||
Sbjct 642775 ACAGCGTCGAGTTCGTCAATGAATACGATAGCAGGTGCCTTGGCTCGTGCAGCGGTGAAG 642834
Query 11024 ATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGGCGGCGGAA 11083
| || ||||| | ||| || |||||||| || | | || | || | || | | ||
Sbjct 642835 AGTTCGCGGACACGCTTTGCTCCGACACCAACGTAGACCTCGTCGAACTCGGAGCCAGA- 642893
Query 11084 CAT-TGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCC 11142
||| | || |||||| || || |||||| || | ||| ||||||||||| || || ||
Sbjct 642894 CATGTAGAAGAAGGGAACACCGGCTTCACCAGCAACGGCACGGGCGAGGAGCGTTTTTCC 642953
Query 11143 CGTCCCAGG 11151
|| |||||
Sbjct 642954 AGTTCCAGG 642962
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597353084782520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |