Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq17 233 2e-56
>seq17
Length=926260
Score = 233 bits (258), Expect = 2e-56
Identities = 612/923 (66%), Gaps = 18/923 (2%)
Strand=Plus/Minus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | | ||| | |||||| || || ||| || ||||||||| || | |||
Sbjct 107462 AACTACCAGTTCTTCGGCTTCAAGACCCTCGAGCGCTCATACCTCCTCCGCATCAACGGC 107403
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| |||| ||||||| || || || |||||||||| ||||| |||| ||||||||| |
Sbjct 107402 AAGGTTGCCGAGCGTCCACAACACATGCTGATGCGTGTCGCTGTCGGCATTCACGGCAAT 107343
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894
||||| ||| | | | | | | ||||| | ||| | ||| |||
Sbjct 107342 GACATCGAGAAGGCCATTGAGACGTACGACTACATGTCACAGAAGTACTTTACACACGCC 107283
Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953
| ||||| || |||||||| || || || || |||||||| || || ||||| ||
Sbjct 107282 TCGCCGACGCTCTTCAACGCAGGCACTCCATCCCCTCAGATGTCCTCCTGCTTCCTCATT 107223
Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013
||| | || | ||| ||| ||| || | ||||| || ||| |||||| ||
Sbjct 107222 GAC-ATGAAAGAGGACAGCATTGACGGTATCTACGACACACTGAAGACCTGTGCCTTGAT 107164
Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCC 94071
||| || || || || || || ||| || || |||| ||||||| || |||
Sbjct 107163 CTCCAAGACTGCTGGCGGTATTGGCCTCAACGTGCAT--CGTATCCGTGCCACAGGCTCC 107106
Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131
|||||| | || ||||| || || || || || ||| | ||||||||||| |||| ||||
Sbjct 107105 TACATCGGTGGCACCAACGGAACTTCGAATGGTCTCATTCCTATGCTCCGTGTCTACAAC 107046
Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191
||| | || || ||||| ||||||||||| | | | ||| | || || |||||
Sbjct 107045 AACACAGCACGTTACGTTGACCAGGGTGGCAACAAGCGTCCCGGTGCCTTTGCCATCTAT 106986
Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251
|| ||||| |||||||| || || | ||| | ||| |||| ||||||||||||||
Sbjct 106985 CTTGAGCCATGGCACGCCGATGTCTTCGGCTTCCTTGACTTGCGCAAGAACCACGGCAAG 106926
Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311
|| || | || | || |||||||||||| | ||| | || || || || |||||
Sbjct 106925 GAAGAGGTCCGCGCTCGTGATCTCTTCTACGCTTTGTGGATCCCCGATCTCTTCATGAAG 106866
Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371
|||||| | | || | |||| || || ||||||||||| ||| || || ||
Sbjct 106865 CGCGTCCAAGAGAATGGTGAATGGACGCTGTTCTGTCCCAATGAGGCTCCTGGTCTTGCC 106806
Query 94372 GACGTTT--GTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAA-- 94427
|| |||| | ||| | | || || || | || || ||||| | ||| ||
Sbjct 106805 GATGTTTACGGTGAT-GAG-TTCGAGGAGCTCTACCACCGCTACGA---GAAGGAGAATC 106751
Query 94428 --GGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTG 94485
|| | ||| | ||| |||||| ||| || || | || | |||
Sbjct 106750 GTGGTCGTGAA-ACCGTCCGTGCCCAGAAGCTTTGGTATGCCATTCTCGAGGCGCAGACC 106692
Query 94486 GAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAG 94545
||||| |||| || | ||| | | ||||||| | |||| ||| ||||||| ||
Sbjct 106691 GAGACTGGTAACCCTTTCATGCTCTACAAGGACGCCTGCAACAGGAAGAGCAACCAGAAG 106632
Query 94546 CACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCG 94605
|||| || ||| ||||| || || ||||| ||||| ||||||| ||| ||||
Sbjct 106631 AACCTGGGTACTATCCGAAGCTCCAACCTCTGCACTGAGATCATCGAGTACACTGCTCCT 106572
Query 94606 GACGAGATTGCTGTGTGTAACCT 94628
|||||| | ||||| || || ||
Sbjct 106571 GACGAGGTGGCTGTCTGCAATCT 106549
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494722773301240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |