Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016- 05-18] 69 sequences; 38,501,010 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq17 280 2e-70 seq18 102 1e-16 seq6 86.0 8e-12 >seq17 Length=926260 Score = 280 bits (310), Expect = 2e-70 Identities = 1128/1750 (64%), Gaps = 55/1750 (3%) Strand=Plus/Plus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 |||||||||||||| ||||||||||| || ||||||| || | ||||| || | Sbjct 105664 CGGAGGTAGTACATGCCCGTCTTGAGACCAAGCTTCCAACCAGCAAAGTGCATCGACGTG 105723 Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677 | |||| | || || | |||| || ||| | | || || |||||||||||| Sbjct 105724 ATCTTGCCCATAGTAGGCTCCTTCATGTGGATGTTGAGAGACTGAGACTGATCGATGAAG 105783 Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTT---GATTTCCCACACAGTT 115734 || || || || ||||| | || | | ||| || ||||||||| ||||| Sbjct 105784 GCACCACGGTCAGCAGCCATCTGGATGA--TGGTTCG-CTGAGAGATTTCCCAAACAGTC 105840 Query 115735 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCC 115794 |||| || |||| | || || || || | || |||||| ||||||||| | Sbjct 105841 TTGTAAAGAGTCTTGGTCTCTTCAGGAATGTTGGGAATGCGTTGGATGGAGCCACCTTC- 105899 Query 115795 TTGACCATGA---GATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCC 115851 || | |||| ||| |||||| | || ||||| ||||| || | ||||||| Sbjct 105900 -TG-CAATGATACGATTCTTCATGTTCTCAGACCACAGACCCATATCGACCAGATCCTTA 105957 Query 115852 ACGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTG 115911 | || ||||| || |||||||| ||||| || | |||||||| Sbjct 105958 AGCAGCCATGGGTTGACGACTTGGAACTCACCAGCGAGCACACGGCGGGAGTAGATGTTC 106017 Query 115912 GTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGC 115971 | |||||||||||||||||||| ||||| || | ||| || | || || || || ||| Sbjct 106018 GATGTGTATGGCTCAAAGCACTCGTTGTTTCCGAGGATCTGAGAGGTAGATGCAGTTGGC 106077 Query 115972 ATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCG 116031 |||||||| || | ||| |||||| | ||| | ||| ||||| |||| | Sbjct 106078 ATGGGTGCAATCAAAAGAGAGTTGCGAACACCATGCTGAGCAATCTTCTCCTTCAGGGAG 106137 Query 116032 TCCCAGT--CGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTT 116089 |||||| | || | || | | | | | |||||| || |||| || ||||| | Sbjct 106138 GCCCAGTCCCACAGATCAG--TAGGAGTCACATTCCACATGTCGTACTGAAGAATACCCT 106195 Query 116090 GGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGC 116149 | ||| ||||||| ||||| | |||| |||||||| ||| || | || | Sbjct 106196 GAGACACTGGCGAACCCTCGTAGGTCTGGTATGGGCCGAGTTCCTTGGCGATGTCACAAG 106255 Query 116150 TCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAAT-------GCGAGCATTCATTGCC 116202 | |||||| ||||| || || || || || || |||| ||| | ||| Sbjct 106256 ATGAAGTGAGGGCGGCGTGGTAGATGGTTTCGAAGATCTGGATGTTGAGC-TTCTTGGCC 106314 Query 116203 T-TGGC--CTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCT 116259 | |||| |||| || ||| ||| ||| | || ||| |||| || |||||| Sbjct 106315 TCTGGCGACTCGAAGG--GCAAGCGC-AGA-GCCAGGAAA-----GCATCAGCAAGACCT 106365 Query 116260 TGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGA 116319 |||||||| | |||||| || | || | | || || || ||| || || Sbjct 106366 TGGACACCCATGCCAATAGGCCTGTGGCGGAAGTTGCTGCGACGTGCCTCCTCGACTGGG 106425 Query 116320 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 116379 || || ||||| | | | || | ||| |||||||||| |||| || ||| Sbjct 106426 TAGTGGTTGACCTCGATGATCTTGTTCAAATTGCGAGTGACAACCTGGGTGACCTCGTGA 106485 Query 116380 AGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGAC 116439 ||||||| | | || || || | || | || ||| | || || || | || Sbjct 106486 AGCTTTTGGAAGTCGAACTCGCCACGCTTGTAATCAACAAAGGATGGGAGAGCAAGGGAA 106545 Query 116440 GCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAA 116499 || ||||| || |||| ||| || | |||||||||| || || || || || | Sbjct 106546 GCAAGATTGCAGACAGCCACCTCGTCAGGAGCAGTGTACTCGATGATCTCAGTGCAGAGG 106605 Query 116500 TTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTG 116559 || || || || || |||| |||||| || || ||| |||| || || |||||| Sbjct 106606 TTGGAGCTTCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTG 106665 Query 116560 TAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATC 116618 |||||||| | || | || ||||| || || | || |||||| || | ||| | | || Sbjct 106666 TAGAGCATGAAAGGGTTACCAGTCTCGGTCTGCGCCTCGAGAATGGCATACCAAAGCTTC 106725 Query 116619 GGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTA-CTTTGTGTAGAGGGCCT 116677 | ||| | || || | | || ||||| |||||| | || |||||| ||| Sbjct 106726 TG-GGCACGGACGGTTTCACGACCACGATTCTCCTTCTCGTAGCGGTG-GTAGAGCTCCT 106783 Query 116678 CAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACC 116737 | ||||| ||||| | | || | || || || |||| || |||||||| || | || Sbjct 106784 CGAACTCATCACCGTAAACATCGGCAAGACCAGGAGCCTCATTGGGACAGAACAGCGTCC 106843 Query 116738 ATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGA 116797 ||| |||| ||| | || |||||||||||||| || |||||||| | || |||||| Sbjct 106844 ATTCACCATTCTCTTGGACGCGCTTCATGAAGAGATCGGGGATCCACAAAGCGTAGAAGA 106903 Query 116798 GATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGA 116857 |||| ||| ||| | ||||| | || || || ||||| || | ||| | | || Sbjct 106904 GATCACGAGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAAGTCAAGGAAGCCGAAGA 106963 Query 116858 TATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGACG------ACCAG 116911 ||| |||||||| || || || || | || | | || | |||| ||| Sbjct 106964 CATCGGCGTGCCATGGCTCAAGATAGATGGCAAAGGCACC---GGGACGCTTGTTGCCAC 107020 Query 116912 CCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAG 116971 |||||| || || | || || ||| | || || ||||| ||||||| ||||| | Sbjct 107021 CCTGGTCAACGTAACGTGCTGTGTTGTTGTAGACACGGAGCATAGGAATGAGACCATTCG 107080 Query 116972 ATTGGCCATTTGT-CCCCCGA-ATACGAGACTTGTTGGCTCTGACATCGTGGATGTGCAT 117029 | || || || || |||| || ||| || |||| | || | || | || | Sbjct 107081 AAGTTCCGTTGGTGCCACCGATGTAGGAGCCT--GTGGCACGGATACGATGCACGTTGAG 107138 Query 117030 ACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCC 117089 |||||||| || || ||| ||||| || || | | || || ||||||| || Sbjct 107139 GCCAATACCGCCAGCAGTCTTGGAGATCAAGGCACAGGTCTTCAGTGTGTCGTAGATACC 107198 Query 117090 ATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGT 117149 || || ||| | || | | |||||||||||| ||||| || || ||| || Sbjct 107199 GTCAATGCTGTCCTCTTTCATGTCAATGAGGAAGCAGGAGGACATCTGAGGGGATGGAGT 107258 Query 117150 ACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTATCGT 117208 || ||||||||||| || || | ||||| | || ||| | || ||||| | |||| Sbjct 107259 GCCTGCGTTGAAGAGCGTCGGCGAGGCGTGTGT-AAAGTACTTCTGTGACATGTAGTCGT 107317 Query 117209 AGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACA 117268 | ||||| | | | ||||| | |||||||| |||| | ||| ||||| | || Sbjct 107318 ACGTCTCAATGGCCTTCTCGATGTCATTGCCGTGAATGCCGACAGCGACACGCATCAGCA 107377 Query 117269 TGTATTGGGG 117278 ||| ||| || Sbjct 107378 TGTGTTGTGG 107387 >seq18 Length=888533 Score = 102 bits (112), Expect = 1e-16 Identities = 303/460 (66%), Gaps = 17/460 (4%) Strand=Plus/Plus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 ||| || || || ||||||||||||||||| ||||| ||| | || ||| |||||||| Sbjct 234342 GTAATCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCTAGCGAGATGTTCTCCAT 234401 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCTGTTTGAGGAGA 127348 || || || ||||| | | || | | ||| || || | | || || Sbjct 234402 GAAGTCGAAGGGGTTGGTGGCATTGTAGACCTTGGTGTTGCCGAGAGCCAAC--AGCAGG 234459 Query 127349 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 127408 ||||| | ||| |||||||||||| |||| | ||||||||| | || Sbjct 234460 CGATCGGCAACGAACTCAATGTACTGGCACATAAGGGTGGCGTTCATACCAAGAAGTGCG 234519 Query 127409 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCG 127468 || ||||| || || | |||| | | |||||| ||||| || | |||||| Sbjct 234520 CAGGGGAGAGCCTCGCTCAAGAACTCTTGCTCAATTGTGACAGCCTCAGTGATGATGGCC 234579 Query 127469 TGAATAGTGTCCACCCCAGGTC---TATTGCGTAAAGTCTTGAAGAGTTCCA--CA-GCA 127522 || | || ||| | || | | ||| | | || |||||| || || || Sbjct 234580 TGGACAGACTCCTTGCTGGGGCGGTTGTTGAGAAGAGA---GAAGAG---CAGGCATGCG 234633 Query 127523 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 127582 || || || | ||||||||| ||||||||||| || || ||||| |||||||||| Sbjct 234634 AAATCAGTATGCATACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAATGTCAGACCTGGC 234693 Query 127583 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 127642 || ||||| |||||||| | ||| || || | ||| ||||| ||||||||| ||| Sbjct 234694 ATCAGACCACGCTTCTTGAGCCAAAAGATGGACGCAAAGGAGCCGCTGAAGAAGATGCCC 234753 Query 127643 TCCACACACGCGAACGCAAATAGACGCTCGGC-AAAGGAG 127681 ||||| || || || | ||||| | ||| |||| || Sbjct 234754 TCCACGGCAGCAAATGCGACGAGACGGTTGGCGAAAGTAG 234793 >seq6 Length=1708680 Score = 86.0 bits (94), Expect = 8e-12 Identities = 245/369 (66%), Gaps = 17/369 (5%) Strand=Plus/Plus Query 12702 CGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCC 12761 ||||| || || || || ||||| || ||| ||| || | ||| | |||| || || Sbjct 642607 CGATCGAAACGTCCGGGTCGGAGAAGAGCGGAGTCGAGCAAATCGGCGTGGTTAGTGGCG 642666 Query 12762 GCGATGACAACGATGCCCGTCTCGTTATCGAAGCCATCCATCTCAGTCAAGAGTTGATTG 12821 || |||| | || ||| || | |||||| ||||| | ||| | | ||||| || Sbjct 642667 GCTATGAAGATGACGCCGGTGCTTTGATCGAAACCATCGAGGTCATTGAGAAGTTGGTTC 642726 Query 12822 ATGGTTTGTTCACGTTCATCATTCGCGGGCATACCACCCGCACTGCGTTGCTT---ACCG 12878 | |||||| || | || ||| ||||| ||| | ||| | |||| ||| Sbjct 642727 AGGGTTTGG---CGGTGATAATT----GGCAT--CACGGG-ACTT--TCGCTTTCCACCT 642774 Query 12879 ACGGCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTCACGGGCAACTTCAAAG 12938 || ||||| | |||||||||||| |||||| ||| || | || ||| | ||| Sbjct 642775 ACAGCGTCGAGTTCGTCAATGAATACGATAGCAGGTGCCTTGGCTCGTGCAGCGGTGAAG 642834 Query 12939 ATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGCGGAA 12998 | || || || | ||| || |||||||| || | | ||| | || | || | | | | Sbjct 642835 AGTTCGCGGACACGCTTTGCTCCGACACCAACGTAGACCTCGTCGAACTCGGAGCCAG-A 642893 Query 12999 CAT-TGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCC 13057 ||| | || |||||| || || |||||| || | ||| ||||||||||| || || || Sbjct 642894 CATGTAGAAGAAGGGAACACCGGCTTCACCAGCAACGGCACGGGCGAGGAGCGTTTTTCC 642953 Query 13058 CGTCCCTGG 13066 || || || Sbjct 642954 AGTTCCAGG 642962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506670850040