Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq17 280 2e-70
seq18 102 1e-16
seq6 86.0 8e-12
>seq17
Length=926260
Score = 280 bits (310), Expect = 2e-70
Identities = 1128/1750 (64%), Gaps = 55/1750 (3%)
Strand=Plus/Plus
Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617
|||||||||||||| ||||||||||| || ||||||| || | ||||| || |
Sbjct 105664 CGGAGGTAGTACATGCCCGTCTTGAGACCAAGCTTCCAACCAGCAAAGTGCATCGACGTG 105723
Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677
| |||| | || || | |||| || ||| | | || || ||||||||||||
Sbjct 105724 ATCTTGCCCATAGTAGGCTCCTTCATGTGGATGTTGAGAGACTGAGACTGATCGATGAAG 105783
Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTT---GATTTCCCACACAGTT 115734
|| || || || ||||| | || | | ||| || ||||||||| |||||
Sbjct 105784 GCACCACGGTCAGCAGCCATCTGGATGA--TGGTTCG-CTGAGAGATTTCCCAAACAGTC 105840
Query 115735 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCC 115794
|||| || |||| | || || || || | || |||||| ||||||||| |
Sbjct 105841 TTGTAAAGAGTCTTGGTCTCTTCAGGAATGTTGGGAATGCGTTGGATGGAGCCACCTTC- 105899
Query 115795 TTGACCATGA---GATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCC 115851
|| | |||| ||| |||||| | || ||||| ||||| || | |||||||
Sbjct 105900 -TG-CAATGATACGATTCTTCATGTTCTCAGACCACAGACCCATATCGACCAGATCCTTA 105957
Query 115852 ACGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTG 115911
| || ||||| || |||||||| ||||| || | ||||||||
Sbjct 105958 AGCAGCCATGGGTTGACGACTTGGAACTCACCAGCGAGCACACGGCGGGAGTAGATGTTC 106017
Query 115912 GTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGC 115971
| |||||||||||||||||||| ||||| || | ||| || | || || || || |||
Sbjct 106018 GATGTGTATGGCTCAAAGCACTCGTTGTTTCCGAGGATCTGAGAGGTAGATGCAGTTGGC 106077
Query 115972 ATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCG 116031
|||||||| || | ||| |||||| | ||| | ||| ||||| |||| |
Sbjct 106078 ATGGGTGCAATCAAAAGAGAGTTGCGAACACCATGCTGAGCAATCTTCTCCTTCAGGGAG 106137
Query 116032 TCCCAGT--CGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTT 116089
|||||| | || | || | | | | | |||||| || |||| || ||||| |
Sbjct 106138 GCCCAGTCCCACAGATCAG--TAGGAGTCACATTCCACATGTCGTACTGAAGAATACCCT 106195
Query 116090 GGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGC 116149
| ||| ||||||| ||||| | |||| |||||||| ||| || | || |
Sbjct 106196 GAGACACTGGCGAACCCTCGTAGGTCTGGTATGGGCCGAGTTCCTTGGCGATGTCACAAG 106255
Query 116150 TCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAAT-------GCGAGCATTCATTGCC 116202
| |||||| ||||| || || || || || || |||| ||| | |||
Sbjct 106256 ATGAAGTGAGGGCGGCGTGGTAGATGGTTTCGAAGATCTGGATGTTGAGC-TTCTTGGCC 106314
Query 116203 T-TGGC--CTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCT 116259
| |||| |||| || ||| ||| ||| | || ||| |||| || ||||||
Sbjct 106315 TCTGGCGACTCGAAGG--GCAAGCGC-AGA-GCCAGGAAA-----GCATCAGCAAGACCT 106365
Query 116260 TGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGA 116319
|||||||| | |||||| || | || | | || || || ||| || ||
Sbjct 106366 TGGACACCCATGCCAATAGGCCTGTGGCGGAAGTTGCTGCGACGTGCCTCCTCGACTGGG 106425
Query 116320 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 116379
|| || ||||| | | | || | ||| |||||||||| |||| || |||
Sbjct 106426 TAGTGGTTGACCTCGATGATCTTGTTCAAATTGCGAGTGACAACCTGGGTGACCTCGTGA 106485
Query 116380 AGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGAC 116439
||||||| | | || || || | || | || ||| | || || || | ||
Sbjct 106486 AGCTTTTGGAAGTCGAACTCGCCACGCTTGTAATCAACAAAGGATGGGAGAGCAAGGGAA 106545
Query 116440 GCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAA 116499
|| ||||| || |||| ||| || | |||||||||| || || || || || |
Sbjct 106546 GCAAGATTGCAGACAGCCACCTCGTCAGGAGCAGTGTACTCGATGATCTCAGTGCAGAGG 106605
Query 116500 TTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTG 116559
|| || || || || |||| |||||| || || ||| |||| || || ||||||
Sbjct 106606 TTGGAGCTTCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTG 106665
Query 116560 TAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATC 116618
|||||||| | || | || ||||| || || | || |||||| || | ||| | | ||
Sbjct 106666 TAGAGCATGAAAGGGTTACCAGTCTCGGTCTGCGCCTCGAGAATGGCATACCAAAGCTTC 106725
Query 116619 GGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTA-CTTTGTGTAGAGGGCCT 116677
| ||| | || || | | || ||||| |||||| | || |||||| |||
Sbjct 106726 TG-GGCACGGACGGTTTCACGACCACGATTCTCCTTCTCGTAGCGGTG-GTAGAGCTCCT 106783
Query 116678 CAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACC 116737
| ||||| ||||| | | || | || || || |||| || |||||||| || | ||
Sbjct 106784 CGAACTCATCACCGTAAACATCGGCAAGACCAGGAGCCTCATTGGGACAGAACAGCGTCC 106843
Query 116738 ATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGA 116797
||| |||| ||| | || |||||||||||||| || |||||||| | || ||||||
Sbjct 106844 ATTCACCATTCTCTTGGACGCGCTTCATGAAGAGATCGGGGATCCACAAAGCGTAGAAGA 106903
Query 116798 GATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGA 116857
|||| ||| ||| | ||||| | || || || ||||| || | ||| | | ||
Sbjct 106904 GATCACGAGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAAGTCAAGGAAGCCGAAGA 106963
Query 116858 TATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGACG------ACCAG 116911
||| |||||||| || || || || | || | | || | |||| |||
Sbjct 106964 CATCGGCGTGCCATGGCTCAAGATAGATGGCAAAGGCACC---GGGACGCTTGTTGCCAC 107020
Query 116912 CCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAG 116971
|||||| || || | || || ||| | || || ||||| ||||||| ||||| |
Sbjct 107021 CCTGGTCAACGTAACGTGCTGTGTTGTTGTAGACACGGAGCATAGGAATGAGACCATTCG 107080
Query 116972 ATTGGCCATTTGT-CCCCCGA-ATACGAGACTTGTTGGCTCTGACATCGTGGATGTGCAT 117029
| || || || || |||| || ||| || |||| | || | || | || |
Sbjct 107081 AAGTTCCGTTGGTGCCACCGATGTAGGAGCCT--GTGGCACGGATACGATGCACGTTGAG 107138
Query 117030 ACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCC 117089
|||||||| || || ||| ||||| || || | | || || ||||||| ||
Sbjct 107139 GCCAATACCGCCAGCAGTCTTGGAGATCAAGGCACAGGTCTTCAGTGTGTCGTAGATACC 107198
Query 117090 ATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGT 117149
|| || ||| | || | | |||||||||||| ||||| || || ||| ||
Sbjct 107199 GTCAATGCTGTCCTCTTTCATGTCAATGAGGAAGCAGGAGGACATCTGAGGGGATGGAGT 107258
Query 117150 ACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTATCGT 117208
|| ||||||||||| || || | ||||| | || ||| | || ||||| | ||||
Sbjct 107259 GCCTGCGTTGAAGAGCGTCGGCGAGGCGTGTGT-AAAGTACTTCTGTGACATGTAGTCGT 107317
Query 117209 AGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACA 117268
| ||||| | | | ||||| | |||||||| |||| | ||| ||||| | ||
Sbjct 107318 ACGTCTCAATGGCCTTCTCGATGTCATTGCCGTGAATGCCGACAGCGACACGCATCAGCA 107377
Query 117269 TGTATTGGGG 117278
||| ||| ||
Sbjct 107378 TGTGTTGTGG 107387
>seq18
Length=888533
Score = 102 bits (112), Expect = 1e-16
Identities = 303/460 (66%), Gaps = 17/460 (4%)
Strand=Plus/Plus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
||| || || || ||||||||||||||||| ||||| ||| | || ||| ||||||||
Sbjct 234342 GTAATCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCTAGCGAGATGTTCTCCAT 234401
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCTGTTTGAGGAGA 127348
|| || || ||||| | | || | | ||| || || | | || ||
Sbjct 234402 GAAGTCGAAGGGGTTGGTGGCATTGTAGACCTTGGTGTTGCCGAGAGCCAAC--AGCAGG 234459
Query 127349 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 127408
||||| | ||| |||||||||||| |||| | ||||||||| | ||
Sbjct 234460 CGATCGGCAACGAACTCAATGTACTGGCACATAAGGGTGGCGTTCATACCAAGAAGTGCG 234519
Query 127409 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCG 127468
|| ||||| || || | |||| | | |||||| ||||| || | ||||||
Sbjct 234520 CAGGGGAGAGCCTCGCTCAAGAACTCTTGCTCAATTGTGACAGCCTCAGTGATGATGGCC 234579
Query 127469 TGAATAGTGTCCACCCCAGGTC---TATTGCGTAAAGTCTTGAAGAGTTCCA--CA-GCA 127522
|| | || ||| | || | | ||| | | || |||||| || || ||
Sbjct 234580 TGGACAGACTCCTTGCTGGGGCGGTTGTTGAGAAGAGA---GAAGAG---CAGGCATGCG 234633
Query 127523 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 127582
|| || || | ||||||||| ||||||||||| || || ||||| ||||||||||
Sbjct 234634 AAATCAGTATGCATACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAATGTCAGACCTGGC 234693
Query 127583 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 127642
|| ||||| |||||||| | ||| || || | ||| ||||| ||||||||| |||
Sbjct 234694 ATCAGACCACGCTTCTTGAGCCAAAAGATGGACGCAAAGGAGCCGCTGAAGAAGATGCCC 234753
Query 127643 TCCACACACGCGAACGCAAATAGACGCTCGGC-AAAGGAG 127681
||||| || || || | ||||| | ||| |||| ||
Sbjct 234754 TCCACGGCAGCAAATGCGACGAGACGGTTGGCGAAAGTAG 234793
>seq6
Length=1708680
Score = 86.0 bits (94), Expect = 8e-12
Identities = 245/369 (66%), Gaps = 17/369 (5%)
Strand=Plus/Plus
Query 12702 CGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCC 12761
||||| || || || || ||||| || ||| ||| || | ||| | |||| || ||
Sbjct 642607 CGATCGAAACGTCCGGGTCGGAGAAGAGCGGAGTCGAGCAAATCGGCGTGGTTAGTGGCG 642666
Query 12762 GCGATGACAACGATGCCCGTCTCGTTATCGAAGCCATCCATCTCAGTCAAGAGTTGATTG 12821
|| |||| | || ||| || | |||||| ||||| | ||| | | ||||| ||
Sbjct 642667 GCTATGAAGATGACGCCGGTGCTTTGATCGAAACCATCGAGGTCATTGAGAAGTTGGTTC 642726
Query 12822 ATGGTTTGTTCACGTTCATCATTCGCGGGCATACCACCCGCACTGCGTTGCTT---ACCG 12878
| |||||| || | || ||| ||||| ||| | ||| | |||| |||
Sbjct 642727 AGGGTTTGG---CGGTGATAATT----GGCAT--CACGGG-ACTT--TCGCTTTCCACCT 642774
Query 12879 ACGGCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTCACGGGCAACTTCAAAG 12938
|| ||||| | |||||||||||| |||||| ||| || | || ||| | |||
Sbjct 642775 ACAGCGTCGAGTTCGTCAATGAATACGATAGCAGGTGCCTTGGCTCGTGCAGCGGTGAAG 642834
Query 12939 ATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGCGGAA 12998
| || || || | ||| || |||||||| || | | ||| | || | || | | | |
Sbjct 642835 AGTTCGCGGACACGCTTTGCTCCGACACCAACGTAGACCTCGTCGAACTCGGAGCCAG-A 642893
Query 12999 CAT-TGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCC 13057
||| | || |||||| || || |||||| || | ||| ||||||||||| || || ||
Sbjct 642894 CATGTAGAAGAAGGGAACACCGGCTTCACCAGCAACGGCACGGGCGAGGAGCGTTTTTCC 642953
Query 13058 CGTCCCTGG 13066
|| || ||
Sbjct 642954 AGTTCCAGG 642962
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613506670850040
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