Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016- 05-18] 69 sequences; 38,501,010 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq18 131 3e-25 >seq18 Length=888533 Score = 131 bits (144), Expect = 3e-25 Identities = 169/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 159914 AACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGAC 159973 || || ||||| || || || |||| |||||||| || ||||||| ||||||||| Sbjct 234619 AAGAGCAGGCATGCGAAATCAGTATGCATACCCTCGTCGCGGGAGATGAGCTCGTTGGAG 234678 Query 159974 ATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCG 160033 | | || || ||||| | |||||| ||||||||||| |||| |||||| | ||| Sbjct 234679 AATGTCAGACCTGGCATCAGACCACGCTTCTTGAGCCAAAAGATGGACGCAAAGGAGCCG 234738 Query 160034 CTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTG 160093 || || ||||| ||||||||||| ||||| || ||||| | | | |||| | ||| Sbjct 234739 CTGAAGAAGATGCCCTCCACGGCAGCAAATGCGACGAGACGGTTGGCGAAAGTAGAGTTC 234798 Query 160094 GTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCG-ATGCACGG 160143 ||||| | |||| | |||||| ||||||||| ||||| ||||| || Sbjct 234799 TTGTCAGAGATCCATCGAAGGGCCCAATCAGCCTTC-TTGCGAATGCAGGG 234848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154514178640