Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016- 05-18] 69 sequences; 38,501,010 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq17 297 2e-75 seq18 116 5e-21 >seq17 Length=926260 Score = 297 bits (328), Expect = 2e-75 Identities = 1130/1747 (65%), Gaps = 49/1747 (3%) Strand=Plus/Minus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 ||||| ||||| | ||||| ||||| |||| || || || | || || || | Sbjct 107387 CCACAACACATGCTGATGCGTGTCGCTGTCGGCATTCACGGCAATGACATCGAGAAGGCC 107328 Query 111672 TTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 | ||||| |||||| | ||||| | | ||| || | ||||| | || || ||||| Sbjct 107327 ATTGAGACGTACGACTACATGTCACAGAAGTACTTT-ACACACGCCTCGCCGACGCTCTT 107269 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 |||||| || || ||| || || |||||| || ||||| |||| | || ||||| Sbjct 107268 CAACGCAGGCACTCCATCCCCTCAGATGTCCTCCTGCTTCCTCATTGACATGAAAGAGGA 107209 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAA----TGTGCCCAAATCTCAAAGTGGG 111846 || | || || |||| ||| |||||| |||||| ||||| ||| | Sbjct 107208 CAGCATTGACGGTATCTACGACAC----ACTGAAGACCTGTGCCTTGATCTCCAAGACTG 107153 Query 111847 CTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGG 111904 |||| ||||| || | || | ||| | || | |||| || ||| || | | || Sbjct 107152 CTGGCGGTATTGGCCTCAACGTGCATCGTATCCGTGCCAC--AGGCTCCTACATCGGTGG 107095 Query 111905 TACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 111964 || || || || ||||| | ||||| ||||| || || | ||| |||||| || Sbjct 107094 CACCAACGGAACTTCGAATGGTCTCATTCCTATGCTCCGTGTCTACAACAACACAGCACG 107035 Query 111965 CTATGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCC 112018 || || |||| | ||| ||||| | || | | || ||||||||||||| Sbjct 107034 TTACGTTGACCAGGGTGGCAACAAGCGTCCC---GGTGCCTTTGCCATCTATCTTGAGCC 106978 Query 112019 ATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG- 112077 ||||||||| ||| || | | |||||||| ||||| ||||| || | || |||| Sbjct 106977 ATGGCACGCCGATGTCTTCGGCTTCCTTGACTTGCGCAAGAACCACGGCAAGGAAGAGGT 106918 Query 112078 -CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTT 112136 |||| | || |||||||||| |||| | ||||| || ||||||||||||||| | || Sbjct 106917 CCGCGCT--CGTGATCTCTTCTACGCTTTGTGGATCCCCGATCTCTTCATGAAGCGCGTC 106860 Query 112137 GAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCC 112196 | |||| ||| | ||| | || || ||||| | |||| || ||||| |||||| Sbjct 106859 CAAGAGAATGGTGAATGGACGCTGTTCTGTCCCAATGAGGCTCCTGGTCTTGCCGATGTT 106800 Query 112197 GTGGGTGAGGAGTTTGAAGCCCTCTACACAAAG-TACGAGGAAGAAAGTCGGGCGACTGC 112255 ||||| ||||| || | |||||| || | |||||| | || | ||| | || Sbjct 106799 TACGGTGATGAGTTCGAGGAGCTCTAC-CACCGCTACGAGAAGGAGAATCGTGGTCGTGA 106741 Query 112256 GACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 112314 || || | || | || | | ||| | || |||||| || | || ||||||||||||| Sbjct 106740 AACCGTCCGTGC-CCAGAAGCTTTGGTATGCCATTCTCGAGGCGCAGACCGAGACTGGTA 106682 Query 112315 CACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTG 112374 || | ||||| ||||| |||||||| ||| ||||| || || ||||| ||||| Sbjct 106681 ACCCTTTCATGCTCTACAAGGACGCCTGCAACAGGAAGAGCAACCAGAAGAACCTGGGTA 106622 Query 112375 TGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGG 112434 ||| || ||||||||||| || || ||| | || | || | || ||| || Sbjct 106621 CTATCCGAAGCTCCAACCTCTGCACTGAGATCATCGAGTACACTGCTCCTGACGAGGTGG 106562 Query 112435 CTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA- 112493 |||| || || || || || | |||||||| | ||| ||| | | | | | Sbjct 106561 CTGTCTGCAATCTTGCTTCCCTTGCTCTCCCATCCTTTGTTGAT-TACAAGCGTGGCGAG 106503 Query 112494 TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTT 112553 || || | |||| || ||||| || || | |||||| || | |||| | Sbjct 106502 TTCGACTTCCAAAAGCTTCACGAGGTCACCCAGGTTGTCACTCGCAATTTGAACAAGATC 106443 Query 112554 ATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCA 112613 || || || ||||| || ||| || ||| || | | ||| | || Sbjct 106442 ATCGAGGTCAACCACTACCCAGTCGAGGAGGCACGTCGCAGCAACTTCCGCCACAGGCCT 106383 Query 112614 ATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTTGA 112672 ||||| | |||||||||||||| || |||| ||| | || || ||| | || || Sbjct 106382 ATTGGCATGGGTGTCCAAGGTCTTGCTGATGCTTTCCTGGCTCTG-CGCTTGCCCTTCGA 106324 Query 112673 TTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCT 112732 || || || ||| | |||| | || || || || || || |||||||| || Sbjct 106323 GTCGCCAGAGGCCAAGAAGCTCAACATCCAGATCTTCGAAACCATCTACCACGCCGCCCT 106264 Query 112733 TGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCC 112792 | || || | || ||| || ||||| | |||| |||||||| || Sbjct 106263 CACTTCATCTTGTGACATCGCCAAGGAACTCGGCCCATACCAGACCTACGAGGGTTCGCC 106204 Query 112793 AGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTAC 112850 || || || || | ||||| | || |||| |||| |||| || | || || | Sbjct 106203 AGTGTCTCAGGGTATTCTTCAGTACGACATGT-GGAATGTGACTCCTA-CTGATCTGTGG 106146 Query 112851 GACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATG 112910 ||||||| | | || ||||| || || | ||| |||| ||| ||||||||| Sbjct 106145 GACTGGGCCTCCCTGAAGGAGAAGATTGCTCAGCATGGTGTTCGCAACTCTCTTTTGATT 106086 Query 112911 GCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCC 112970 ||||| |||||||| || || ||| | || ||| | || || || || |||||||| || Sbjct 106085 GCACCCATGCCAACTGCATCTACCTCTCAGATCCTCGGAAACAACGAGTGCTTTGAGCCA 106026 Query 112971 TACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAG 113030 ||||| |||||||||| | | ||||| || ||||| | |||||| Sbjct 106025 TACACATCGAACATCTACTCCCGCCGTGTGCTCGCTGGTGAGTTCCAAGTCGTCAAC--C 105968 Query 113031 CAT--CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCA 113088 ||| || | | || || || || ||||| ||||| || | |||||| ||| | Sbjct 105967 CATGGCTGCTTAAGGATCTGGTCGATATGGGTCTGTGGTCTGAGAACATGAAGAATCGTA 105908 Query 113089 TGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGT 113148 | | || ||||| ||||| ||| ||| | ||||| || || | |||| Sbjct 105907 TCATTGCAGAAGGTGGCTCCATCCAACGCATTCCCAACATTCCTGAAGAGACCAAGACTC 105848 Query 113149 TGTACCGCACAGTTTGGGAAATC---AAGATGAAGGATGTCATTGACATGGCCGCAGATC 113205 | ||| || |||||||||||| || ||| | |||| | ||||| || || | Sbjct 105847 TTTACAAGACTGTTTGGGAAATCTCTCAG-CGAACCA--TCATCCAGATGGCTGCTGACC 105791 Query 113206 GTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCCAACGATGT 113265 ||||| |||||| ||||| ||| | | || | |||| | || || ||| Sbjct 105790 GTGGTGCCTTCATCGATCAGTCTCAGTCTCTCAACATCCACATGAAGGAGCCTACTATGG 105731 Query 113266 CCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATT 113325 |||| || | || |||||| | |||||||| |||||||| ||||| ||||| | Sbjct 105730 GCAAGATCACGTCGATGCACTTTGCTGGTTGGAAGCTTGGTCTCAAGACGGGCATGTACT 105671 Query 113326 ACCTCCG 113332 ||||||| Sbjct 105670 ACCTCCG 105664 >seq18 Length=888533 Score = 116 bits (128), Expect = 5e-21 Identities = 153/208 (74%), Gaps = 8/208 (4%) Strand=Plus/Minus Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT---TGATACAAAGTC 102166 |||||| || |||| ||||| || |||||||| | ||| | ||| | || || Sbjct 234852 AGTTCCCTGCATTCGCAAGAAGGCTGATTGGGCCCTTCGATGGATCTCTGACAAGAACTC 234793 Query 102167 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 102226 | | || || | || ||| |||||||||| || ||||| ||||||||| || Sbjct 234792 ---TACTTTCGCCAACCGTCTCGTCGCATTTGCTGCCGTGGAGGGCATCTTCTTCAGCGG 234736 Query 102227 TTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 102285 ||||| |||| | || | ||||||||||||||| ||||| ||||||||||| |||| Sbjct 234735 CTCCTT-TGCGTCCATCTTTTGGCTCAAGAAGCGTGGTCTGATGCCAGGTCTGACATTCT 234677 Query 102286 CCAACGAGCTTATCTCTCGTGACGAGGG 102313 |||||||||| ||||| || |||||||| Sbjct 234676 CCAACGAGCTCATCTCCCGCGACGAGGG 234649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741864609680