Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq17 255 7e-63
seq6 131 2e-25
seq32 91.5 2e-13
>seq17
Length=926260
Score = 255 bits (282), Expect = 7e-63
Identities = 1057/1648 (64%), Gaps = 61/1648 (4%)
Strand=Plus/Plus
Query 109408 CGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAG 109467
|| || || ||||| ||||| ||||||||| |||||| | | ||||| || | |
Sbjct 105664 CGGAGGTAGTACATGCCCGTCTTGAGACCAAGCTTCCAACCAGCAAAGTGCATCGACGTG 105723
Query 109468 AGTTTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAAT 109527
| ||| | || || || ||| | ||| | ||||||||||||||||||||
Sbjct 105724 ATCTTGCCCATAGTAGGCTCCTTCATGTGGATGTTGAGAGACTGAGACTGATCGATGAAG 105783
Query 109528 CGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAA----TTTCCCAGACAGT 109583
|||||| ||||| ||||| | |||||| || ||| | ||||||| |||||
Sbjct 105784 GCACCACGGTCAGCAGCCATCTGGATGATGG----TTCGCTGAGAGATTTCCCAAACAGT 105839
Query 109584 CTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAGC 109643
|||||| | | ||||| | || || ||||||| ||| ||| || |||||||| |
Sbjct 105840 CTTGTAAAGAGTCTTGGTCTCTTCAGGAATGTTGGGAATGCGTTGGATGGAGCCACCTTC 105899
Query 109644 CTTCACCATGA---GATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCGTC 109700
| || |||| ||| |||||| | | ||||| ||||| | | ||||| |
Sbjct 105900 -TGCA--ATGATACGATTCTTCATGTTCTCAGACCACAGACCCATATCGACCAGATCCTT 105956
Query 109701 AACAAG--ATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATG 109758
|| || ||| |||||| || || |||||||| || || ||| |||||||
Sbjct 105957 AAGCAGCCATGG--GTTGACGACTTGGAACTCACCAGCGAGCACACGGCGGGAGTAGATG 106014
Query 109759 TTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTG 109818
|| | ||||| || || || ||||| ||||| || ||||| || | || || || ||
Sbjct 106015 TTCGATGTGTATGGCTCAAAGCACTCGTTGTTTCCGAGGATCTGAGAGGTAGATGCAGTT 106074
Query 109819 GGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCATT 109878
|||||||| || || | |||| ||| || | ||| | | | | ||| ||
Sbjct 106075 GGCATGGGTGCAATCAAAAGAGAGTTGCGAACACCATGCTGAGCAATCTTCTCCTTCAGG 106134
Query 109879 GCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGT 109938
| | |||| || | || || || |||| || | |||||| || |||||
Sbjct 106135 GAGGCCCAGTCCCACAGATCAGTAGG---AGTCACA---TTCCACATGTCGTACTGAAGA 106188
Query 109939 ACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAAC 109998
| ||||| || | || ||||||| | | ||| ||| | || ||| ||| |
Sbjct 106189 ATACCCTGAGACACTGGCGAACCCTCGTAGGTCTGGTATGGGCCGAGTTCCTTGGCGATG 106248
Query 109999 TCG---GATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATG-------AGC 110048
|| ||||||| || || || || || || || || || || || |||
Sbjct 106249 TCACAAGATGAAGTG---AGGGCGGCGTGGTAGATGGTTTCGAAGATCTGGATGTTGAGC 106305
Query 110049 ATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGA-ATAAACACATCCG 110107
||| || | |||| | |||||||| | | | || || | || |||| |
Sbjct 106306 -TTCTTG------GCCTCTGGCGACTCGAAGGGCA-AGCGCAGAGCCAGGAAAGCATCAG 106357
Query 110108 CTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTT 110167
| ||||| || ||||| | ||||| || | || | ||| ||| || || |
Sbjct 106358 CAAGACCTTGGACACCCATGCCAATAGGCCTGTGGCGGAAGTTGCTGCGACGTGCCTCCT 106417
Query 110168 CTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGA 110227
| || ||||| |||| ||||||| | || | ||| || ||| || ||||
Sbjct 106418 CGACTGGGTAGTGGTTGACCTCGATGATCTTGTTCAAATTGCGAGTGACAACCTGGGTGA 106477
Query 110228 TTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTC-CTT---ATTGACATATTTGGGG 110283
|| || || || | | | |||||| ||| | | ||| || ||| | |||
Sbjct 106478 CCTCGTGAAGCTTTTGGAAGTCGAAC----TCGCCACGCTTGTAATCAACAAAGGATGGG 106533
Query 110284 AGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATT 110343
||||||| || ||||||||||| |||| |||||| | ||||| || | ||
Sbjct 106534 AGAGCAAGGGAAGCAAGATTGCAGACAGCCACCTCGTCAGGAGCAGTGTACTCGATGATC 106593
Query 110344 TCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTG 110403
|| || || | |||||| || || ||||| ||||||||| || || ||||
Sbjct 106594 TCAGTGCAGAGGTTGGAGCTTCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTCCTGTTG 106653
Query 110404 CATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCC 110463
|| || ||||| ||||||||| | ||| ||||||| || ||||| | || |||||||||
Sbjct 106654 CAGGCGTCCTTGTAGAGCATGAAAGGGTTACCAGTCTCGGTCTGCGCCTCGAGAATGGCA 106713
Query 110464 TTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGT 110522
| ||| | | || | ||| |||| ||| | | | || |||| |||||| |
Sbjct 106714 TACCAAAGCTTCTG-GGCACGGACGGTTTCACGACCACGATTCTCCTTCTCGTAGCGGTG 106772
Query 110523 GTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACA 110582
||| | ||||| || || | ||||| ||||| | |||||| |||| | ||||||
Sbjct 106773 GTAGAGCTCCTCGAACTCATCACCGTAAACATCGGCAAGACCAGGAGCCTCATTGGGACA 106832
Query 110583 GAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACAT 110642
||| || | ||| | ||| ||| | || | ||||||||| || || || |||||||
Sbjct 106833 GAACAGCGTCCATTCACCATTCTCTTGGACGCGCTTCATGAAGAGATCGGGGATCCACAA 106892
Query 110643 CGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAA 110702
|| |||| || ||||| || ||||||| | || ||||| ||| | || |
Sbjct 106893 AGCGTAGAAGAGATCACGAGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAAGTCAAG 106952
Query 110703 AAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACG--- 110759
||| | | || ||| | ||||||||| || ||||||| || | || || |||
Sbjct 106953 GAAGCCGAAGACATCGGCGTGCCATGGCTCAAGATAGATGGCAAAGGCACCGGGACGCTT 107012
Query 110760 ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAAT 110819
|| |||||| ||| || ||||||||| ||| |||| | |||||||||||| |
Sbjct 107013 GTTGCCACCCTGGTCAACGTAACGTGCTGTGTTGTTGTAGACACGGAGCATAGGAATGAG 107072
Query 110820 TCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGAT 110879
|||| || || || || || | || ||| ||||||| || || |
Sbjct 107073 ACCATTCGAAGTTCCGTTGGTGCCACCGATGTAGGAGCCTGTGGCACGGATACGATGCAC 107132
Query 110880 ATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAGTGTACCAT 110938
| | |||||||| || || ||| || ||||| ||| | ||||| | |
Sbjct 107133 GTTGAGGCCAATACCGCCAGCAGTCTTGGAGATCAAGGCACAGGTCT-TCAGTGTGTCGT 107191
Query 110939 AAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGAC 110998
| ||||| ||||| || | || || |||| || ||||| || |||||||||||
Sbjct 107192 AGATACCGTCAATGCTGTCCTCTTTCATGTCAATGAGGAAGCAGGAGGACATCTGAGGGG 107251
Query 110999 GAGGCGTTCCCGCATTGAAGAGTGTAGG 111026
|| || || || |||||||| || ||
Sbjct 107252 ATGGAGTGCCTGCGTTGAAGAGCGTCGG 107279
>seq6
Length=1708680
Score = 131 bits (144), Expect = 2e-25
Identities = 337/505 (67%), Gaps = 19/505 (4%)
Strand=Plus/Plus
Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562
||||||||||| || || ||||| ||||| || || | |||| | |||| || |||
Sbjct 642607 CGATCGAAACGTCCGGGTCGGAGAAGAGCGGAGTCGAGCAAATCGGCGTGGTTAGTGGCG 642666
Query 11563 GCAATGACTACAATGCCAGTCTCATTG-TCGAAACCGTCCATTTCTGTGAGAAGCTGGTT 11621
|| |||| | | ||| || | ||| |||||||| || | || ||||||| |||||
Sbjct 642667 GCTATGAAGATGACGCCGGTG-CTTTGATCGAAACCATCGAGGTCATTGAGAAGTTGGTT 642725
Query 11622 GATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCTGCCGAACGCTTCTTACCGAC 11681
| || || || | || |||| ||| ||| | | ||||| ||| ||
Sbjct 642726 CAGGGTTTGG---CGGTGATAATTGG----CAT--CACGGGACTTTCGCTTTCCACCTAC 642776
Query 11682 AGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGC--CTGTTCGAAA 11739
|||||| | || || |||||||||||| ||| ||||| ||||| | || |||
Sbjct 642777 AGCGTCGAGTTCGTCAATGAATACGATAGCAGGTGCCTTGGCTCGTGCAGCGGT--GAAG 642834
Query 11740 AGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAGAA 11799
||||| || |||||||| ||||| ||||| ||| | | ||| |||| | | | ||||
Sbjct 642835 AGTTCGCGGACACGCTTTGCTCCGACACCAACGTAGACCTCGTCGAACTCGGAGCCAGAC 642894
Query 11800 CACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCC 11859
| | |||||||||| | |||||||| | ||| || |||||||| || || ||
Sbjct 642895 ATGTAGAAGAAGGGAACACCGGCTTCACCAGCAACGGCACGGGCGAGGAGCGTTTTTCCA 642954
Query 11860 GTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC--ACTTCCAAAGT 11917
|| ||||| | |||| | ||| | || ||||| | |||| ||| ||
Sbjct 642955 GTTCCAGGAGGACCAATCAAGAGGACACCCTTGGGGAGTCGGCCACCGAGCTT--GTTGT 643012
Query 11918 AGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAGTCGA 11977
| ||||| ||||||||||| || || | || ||||| |||||||| ||
Sbjct 643013 ACTTGTCAGGATTCTTGAGGAAATCAACGACATCGAGCAGTTCTTCCTTGGCTTCATCAC 643072
Query 11978 TACCCTCAACATCGGTGAAACGAGT 12002
|| | ||| ||| ||||||||||
Sbjct 643073 ATCCGTGAACGTCGCTGAAACGAGT 643097
>seq32
Length=337672
Score = 91.5 bits (100), Expect = 2e-13
Identities = 159/226 (70%), Gaps = 4/226 (2%)
Strand=Plus/Minus
Query 11683 GCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGT 11742
||||| |||||||||||||| | ||| || || | | ||||| | | | || |
Sbjct 336286 GCGTCGATCTCATCGATGAAAATGATGCAAGGAGTGCTCTTGCGTGCGTTTGCAAACAAG 336227
Query 11743 TCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAG-AACA 11801
|| ||||| || |||||| || || || |||||||| || || | | || ||||
Sbjct 336226 TCGCGTACGCGAGACGCTCCTACGCCAACAAACATCTCTACAAATTCAGAACCACTAACA 336167
Query 11802 CTGAATGAAGGGAACATTAGACTCACCAGC-GATGGCTCGAGCGAGGAGAGTCTTACCCG 11860
||||| ||| ||||| ||||| ||||| | || || | || | || || || || |
Sbjct 336166 CTGAA-GAACGGAACTCCTGACTCTCCAGCAGTTGCCTTG-GCCAAAAGGGTTTTTCCAG 336109
Query 11861 TACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC 11906
||||||| | || | ||||| || ||||| ||||||||||||||
Sbjct 336108 TACCAGGCGGGCCGGAGAGAATTGCACCACGCGGGATCTTGGCACC 336063
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588975492008200
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