Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq17 300 2e-76
>seq17
Length=926260
Score = 300 bits (332), Expect = 2e-76
Identities = 1130/1748 (65%), Gaps = 51/1748 (3%)
Strand=Plus/Plus
Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAG 105649
||||| |||||||| || |||||||| || | ||||| | | ||||| || | |
Sbjct 105664 CGGAGGTAGTACATGCCCGTCTTGAGACCAAGCTTCCAACCAGCAAAGTGCATCGACGTG 105723
Query 105650 AGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAG 105709
| |||| ||| || || | |||| | || | | ||| ||| || ||||||
Sbjct 105724 ATCTTGCCCATAGTAGGCTCCTTCATGTGGATGTTGAGAGACTGAGACTGATCGATGAAG 105783
Query 105710 CGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTT---GATTTCCCACACTGTG 105766
|||||| | || ||||| | |||| | ||| || ||||||||| || ||
Sbjct 105784 GCACCACGGTCAGCAGCCATCTGGATGA--TGGTTCG-CTGAGAGATTTCCCAAACAGTC 105840
Query 105767 CGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCC 105826
||| ||| ||||| | || || || || | | || ||| || || || || |
Sbjct 105841 TTGTAAAGAGTCTTGGTCTCTTCAGGAATGTTGGGAATGCGTTGGATGGAGCCACCTTC- 105899
Query 105827 TTGACCATGA---GATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTG 105883
|| | |||| ||| |||||| | || ||||| ||||| || | ||||| ||
Sbjct 105900 -TG-CAATGATACGATTCTTCATGTTCTCAGACCACAGACCCATATCGACCAGATCCTTA 105957
Query 105884 ACGAG--ATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGT 105941
| || ||| |||||| | ||||| || ||||| | | |||||||
Sbjct 105958 AGCAGCCATGG--GTTGACGACTTGGAACTCACCAGCGAGCACACGGCGGGAGTAGATGT 106015
Query 105942 TCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTG 106001
||| ||||| || |||||||| || || || || | ||| || | ||| || || ||||
Sbjct 106016 TCGATGTGTATGGCTCAAAGCACTCGTTGTTTCCGAGGATCTGAGAGGTAGATGCAGTTG 106075
Query 106002 GCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAA 106061
|||| ||||| ||||||||| ||| |||| ||| | | || ||||| ||
Sbjct 106076 GCATGGGTGCAATCAAAAGAGAGTTGCGAACACCATGCTGAGCAATCTTCTCCTTCAGGG 106135
Query 106062 CATCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCC 106119
||||||| | | | || | || |||| |||| |||| || | ||||| | ||
Sbjct 106136 AGGCCCAGTCCCACAGATCAG-TAGGAGTCACATTCC-ACATGTCGTACTGAAGAATACC 106193
Query 106120 TTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACA 106179
|| ||| || |||||||| | |||| || | || | | | || | |||||
Sbjct 106194 CTGAGACACTGGCGAACCCTCGTAGGTCTGGTATGGGCCGAGTTCCTTGGCGATGTCACA 106253
Query 106180 GCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGC 106239
| |||| ||||| || |||||||| ||||| | || | || ||||||
Sbjct 106254 AGATGAAGTGAGGGCGGCGTGGTAGATGGTTTCGAAGATCTGGATGTTGAGCTTCTTGGC 106313
Query 106240 TTCATCTGAATCAAATGCGTAGCGGCACAAA-ATAAATACATCCGCGAGACCTTGAACAC 106298
|| || || || | |||| || | | || |||| || |||||||| ||||
Sbjct 106314 CTCTGGCGACTCGAAGGGCAAGCG-CAGAGCCAGGAAAGCATCAGCAAGACCTTGGACAC 106372
Query 106299 CCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAAT 106358
||| |||||||| ||||| || | || || || ||| || || || |
Sbjct 106373 CCATGCCAATAGGCCTGTGGCGGAAGTTGCTGCGACGTGCCTCCTCGACTGGGTAGTGGT 106432
Query 106359 TTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTT 106418
| || |||| ||| | ||| || |||| || |||| || ||||| ||||
Sbjct 106433 TGACCTCGATGATCTTGTTCAAATTGCGAGTGACAACCTGGGTGACCTCGTGAAGCTTTT 106492
Query 106419 CATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAAT 106478
| || || || | || | || ||| | ||| || || | || || | ||
Sbjct 106493 GGAAGTCGAACTCGCCACGCTTGTAATCAACAAAGGATGGGAGAGCAAGGGAAGCAAGAT 106552
Query 106479 TGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAAC 106538
|||| |||||| ||| || | | |||||||| | || || || || | |||||| |
Sbjct 106553 TGCAGACAGCCACCTCGTCAGGAGCAGTGTACTCGATGATCTCAGTGCAGAGGTTGGAGC 106612
Query 106539 TCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCA 106598
| || || |||| ||||| ||||| ||||| ||||||| || |||||||||||||
Sbjct 106613 TTCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCA 106672
Query 106599 TGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACATCGGCGGCTG 106658
|| | || | || ||||| ||||| | || |||||| || | ||| | || |||
Sbjct 106673 TGAAAGGGTTACCAGTCTCGGTCTGCGCCTCGAGAATGGCATACCAAA-----GCTTCTG 106727
Query 106659 GTACAATGGCGTTGGCCCGTCC------CTCCGCCTCGTA-CTTTGTGTAGAGGGCTTCA 106711
| || | || | | || || |||| |||||| | || |||||| | ||
Sbjct 106728 GG-CACGGACGGTTTCACGACCACGATTCTCCTTCTCGTAGCGGTG-GTAGAGCTCCTCG 106785
Query 106712 AACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCAT 106771
||||| ||||| | |||| ||||| || |||| | |||||||| || | ||||
Sbjct 106786 AACTCATCACCGTAAACATCGGCAAGACCAGGAGCCTCATTGGGACAGAACAGCGTCCAT 106845
Query 106772 TGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGA 106831
| |||| ||| | || ||||||||||| || || || ||||||| | | ||||||
Sbjct 106846 TCACCATTCTCTTGGACGCGCTTCATGAAGAGATCGGGGATCCACAAAGCGTAGAAGAGA 106905
Query 106832 TCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATA 106891
|| | | || ||||||| | || ||||| || || |||||||| | | || |
Sbjct 106906 TCACGAGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAAGTCAAGGAAGCCGAAGACA 106965
Query 106892 TCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCT 106945
|| |||||||||||||||||||||| || | | || ||||| ||| |
Sbjct 106966 TCGGCGTGCCATGGCTCAAGATAGATGGCAAAGGCACC---GGGACGCTTGTTGCCACCC 107022
Query 106946 TGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGAT 107005
|| | || || || |||||| ||| | || || ||||| ||||| | ||||| ||
Sbjct 107023 TGGTCAACGTAACGTGCTGTGTTGTTGTAGACACGGAGCATAGGAATGAGACCATTCGAA 107082
Query 107006 TGACCATTTGT-CCCCCGA-ATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCC 107063
|| || || || |||| || ||| | |||| | | | ||| | || | |
Sbjct 107083 GTTCCGTTGGTGCCACCGATGTAGGAGCCT--GTGGCACGGATACGATGCACGTTGAGGC 107140
Query 107064 CAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGT 107123
||||||| ||||| ||| ||||| ||||| | | || || | ||||||||||
Sbjct 107141 CAATACCGCCAGCAGTCTTGGAGATCAAGGCACAGGTCTTCAGTGTGTCGTAGATACCGT 107200
Query 107124 TGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTAC 107183
|| |||||| || || | || |||||||| ||||||||| || ||| || |
Sbjct 107201 CAATGCTGTCCTCTTTCATGTCAATGAGGAAGCAGGAGGACATCTGAGGGGATGGAGTGC 107260
Query 107184 CAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTAT 107242
| || |||||||| || || | ||||| | || ||| | || ||||| | ||||||
Sbjct 107261 CTGCGTTGAAGAGCGTCGGCGAGGCGTGTGT-AAAGTACTTCTGTGACATGTAGTCGTAC 107319
Query 107243 GTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATG 107302
||||| | | | || ||||| | ||||| ||||||| || |||||||| | ||||
Sbjct 107320 GTCTCAATGGCCTTCTCGATGTCATTGCCGTGAATGCCGACAGCGACACGCATCAGCATG 107379
Query 107303 TATTGGGG 107310
| ||| ||
Sbjct 107380 TGTTGTGG 107387
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589980291141560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |