Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016- 05-18] 69 sequences; 38,501,010 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq17 300 2e-76 >seq17 Length=926260 Score = 300 bits (332), Expect = 2e-76 Identities = 1130/1748 (65%), Gaps = 51/1748 (3%) Strand=Plus/Plus Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAG 105649 ||||| |||||||| || |||||||| || | ||||| | | ||||| || | | Sbjct 105664 CGGAGGTAGTACATGCCCGTCTTGAGACCAAGCTTCCAACCAGCAAAGTGCATCGACGTG 105723 Query 105650 AGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAG 105709 | |||| ||| || || | |||| | || | | ||| ||| || |||||| Sbjct 105724 ATCTTGCCCATAGTAGGCTCCTTCATGTGGATGTTGAGAGACTGAGACTGATCGATGAAG 105783 Query 105710 CGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTT---GATTTCCCACACTGTG 105766 |||||| | || ||||| | |||| | ||| || ||||||||| || || Sbjct 105784 GCACCACGGTCAGCAGCCATCTGGATGA--TGGTTCG-CTGAGAGATTTCCCAAACAGTC 105840 Query 105767 CGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCC 105826 ||| ||| ||||| | || || || || | | || ||| || || || || | Sbjct 105841 TTGTAAAGAGTCTTGGTCTCTTCAGGAATGTTGGGAATGCGTTGGATGGAGCCACCTTC- 105899 Query 105827 TTGACCATGA---GATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTG 105883 || | |||| ||| |||||| | || ||||| ||||| || | ||||| || Sbjct 105900 -TG-CAATGATACGATTCTTCATGTTCTCAGACCACAGACCCATATCGACCAGATCCTTA 105957 Query 105884 ACGAG--ATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGT 105941 | || ||| |||||| | ||||| || ||||| | | ||||||| Sbjct 105958 AGCAGCCATGG--GTTGACGACTTGGAACTCACCAGCGAGCACACGGCGGGAGTAGATGT 106015 Query 105942 TCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTG 106001 ||| ||||| || |||||||| || || || || | ||| || | ||| || || |||| Sbjct 106016 TCGATGTGTATGGCTCAAAGCACTCGTTGTTTCCGAGGATCTGAGAGGTAGATGCAGTTG 106075 Query 106002 GCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAA 106061 |||| ||||| ||||||||| ||| |||| ||| | | || ||||| || Sbjct 106076 GCATGGGTGCAATCAAAAGAGAGTTGCGAACACCATGCTGAGCAATCTTCTCCTTCAGGG 106135 Query 106062 CATCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCC 106119 ||||||| | | | || | || |||| |||| |||| || | ||||| | || Sbjct 106136 AGGCCCAGTCCCACAGATCAG-TAGGAGTCACATTCC-ACATGTCGTACTGAAGAATACC 106193 Query 106120 TTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACA 106179 || ||| || |||||||| | |||| || | || | | | || | ||||| Sbjct 106194 CTGAGACACTGGCGAACCCTCGTAGGTCTGGTATGGGCCGAGTTCCTTGGCGATGTCACA 106253 Query 106180 GCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGC 106239 | |||| ||||| || |||||||| ||||| | || | || |||||| Sbjct 106254 AGATGAAGTGAGGGCGGCGTGGTAGATGGTTTCGAAGATCTGGATGTTGAGCTTCTTGGC 106313 Query 106240 TTCATCTGAATCAAATGCGTAGCGGCACAAA-ATAAATACATCCGCGAGACCTTGAACAC 106298 || || || || | |||| || | | || |||| || |||||||| |||| Sbjct 106314 CTCTGGCGACTCGAAGGGCAAGCG-CAGAGCCAGGAAAGCATCAGCAAGACCTTGGACAC 106372 Query 106299 CCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAAT 106358 ||| |||||||| ||||| || | || || || ||| || || || | Sbjct 106373 CCATGCCAATAGGCCTGTGGCGGAAGTTGCTGCGACGTGCCTCCTCGACTGGGTAGTGGT 106432 Query 106359 TTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTT 106418 | || |||| ||| | ||| || |||| || |||| || ||||| |||| Sbjct 106433 TGACCTCGATGATCTTGTTCAAATTGCGAGTGACAACCTGGGTGACCTCGTGAAGCTTTT 106492 Query 106419 CATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAAT 106478 | || || || | || | || ||| | ||| || || | || || | || Sbjct 106493 GGAAGTCGAACTCGCCACGCTTGTAATCAACAAAGGATGGGAGAGCAAGGGAAGCAAGAT 106552 Query 106479 TGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAAC 106538 |||| |||||| ||| || | | |||||||| | || || || || | |||||| | Sbjct 106553 TGCAGACAGCCACCTCGTCAGGAGCAGTGTACTCGATGATCTCAGTGCAGAGGTTGGAGC 106612 Query 106539 TCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCA 106598 | || || |||| ||||| ||||| ||||| ||||||| || ||||||||||||| Sbjct 106613 TTCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCA 106672 Query 106599 TGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACATCGGCGGCTG 106658 || | || | || ||||| ||||| | || |||||| || | ||| | || ||| Sbjct 106673 TGAAAGGGTTACCAGTCTCGGTCTGCGCCTCGAGAATGGCATACCAAA-----GCTTCTG 106727 Query 106659 GTACAATGGCGTTGGCCCGTCC------CTCCGCCTCGTA-CTTTGTGTAGAGGGCTTCA 106711 | || | || | | || || |||| |||||| | || |||||| | || Sbjct 106728 GG-CACGGACGGTTTCACGACCACGATTCTCCTTCTCGTAGCGGTG-GTAGAGCTCCTCG 106785 Query 106712 AACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCAT 106771 ||||| ||||| | |||| ||||| || |||| | |||||||| || | |||| Sbjct 106786 AACTCATCACCGTAAACATCGGCAAGACCAGGAGCCTCATTGGGACAGAACAGCGTCCAT 106845 Query 106772 TGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGA 106831 | |||| ||| | || ||||||||||| || || || ||||||| | | |||||| Sbjct 106846 TCACCATTCTCTTGGACGCGCTTCATGAAGAGATCGGGGATCCACAAAGCGTAGAAGAGA 106905 Query 106832 TCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATA 106891 || | | || ||||||| | || ||||| || || |||||||| | | || | Sbjct 106906 TCACGAGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAAGTCAAGGAAGCCGAAGACA 106965 Query 106892 TCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCT 106945 || |||||||||||||||||||||| || | | || ||||| ||| | Sbjct 106966 TCGGCGTGCCATGGCTCAAGATAGATGGCAAAGGCACC---GGGACGCTTGTTGCCACCC 107022 Query 106946 TGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGAT 107005 || | || || || |||||| ||| | || || ||||| ||||| | ||||| || Sbjct 107023 TGGTCAACGTAACGTGCTGTGTTGTTGTAGACACGGAGCATAGGAATGAGACCATTCGAA 107082 Query 107006 TGACCATTTGT-CCCCCGA-ATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCC 107063 || || || || |||| || ||| | |||| | | | ||| | || | | Sbjct 107083 GTTCCGTTGGTGCCACCGATGTAGGAGCCT--GTGGCACGGATACGATGCACGTTGAGGC 107140 Query 107064 CAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGT 107123 ||||||| ||||| ||| ||||| ||||| | | || || | |||||||||| Sbjct 107141 CAATACCGCCAGCAGTCTTGGAGATCAAGGCACAGGTCTTCAGTGTGTCGTAGATACCGT 107200 Query 107124 TGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTAC 107183 || |||||| || || | || |||||||| ||||||||| || ||| || | Sbjct 107201 CAATGCTGTCCTCTTTCATGTCAATGAGGAAGCAGGAGGACATCTGAGGGGATGGAGTGC 107260 Query 107184 CAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTAT 107242 | || |||||||| || || | ||||| | || ||| | || ||||| | |||||| Sbjct 107261 CTGCGTTGAAGAGCGTCGGCGAGGCGTGTGT-AAAGTACTTCTGTGACATGTAGTCGTAC 107319 Query 107243 GTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATG 107302 ||||| | | | || ||||| | ||||| ||||||| || |||||||| | |||| Sbjct 107320 GTCTCAATGGCCTTCTCGATGTCATTGCCGTGAATGCCGACAGCGACACGCATCAGCATG 107379 Query 107303 TATTGGGG 107310 | ||| || Sbjct 107380 TGTTGTGG 107387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980291141560