Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016- 05-18] 69 sequences; 38,501,010 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq6 147 5e-30 seq17 100 6e-16 seq16 91.5 3e-13 >seq6 Length=1708680 Score = 147 bits (162), Expect = 5e-30 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| ||||||||||| ||||| |||||||| || | |||||| | || || |||||||| Sbjct 770973 GTGCAGAGTGGACTCCTTTTGGATATTGTAGTCCGAAAGAGTGCGACCGTCCTCGAGCTG 771032 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||||| ||||||||||| || || || || ||||| ||||| || || |||||||| || Sbjct 771033 TTTACCCGCGAAGATAAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTATCTTGAATCTT 771092 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| ||||| || |||||||| || || || || || || | ||||| || || Sbjct 771093 GCTCTTTACGTTGTCGATGGTGTCAGACGACTCAACCTCTAGAGTGATTGTCTTGCCGGT 771152 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 ||| || || ||||| | ||||| Sbjct 771153 CAAGGTCTTGACGAAGATCTGCAT 771176 Score = 145 bits (160), Expect = 2e-29 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | ||| || || || || || ||||| ||||| || | ||||| | || || || Sbjct 771195 AACCAAGTGGAGTGTAGATTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGACCGTCCTC 771254 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| ||||||||||| | || || || ||||| ||||| || || |||||||| Sbjct 771255 GAGCTGCTTTCCTGCGAAGATCAAGCGCTGCTGATCTGGGGGAATACCCTCCTTGTCTTG 771314 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||||| ||| ||||| |||||||| || || ||| || || ||||| | ||||| Sbjct 771315 GATTTTGCTCTTTACGTTATCAATGGTATCTGACGATTCGACCTCGAGGGTGATGGTCTT 771374 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||||| | ||| || ||||| | |||||| Sbjct 771375 TCCTGTGAGAGTCTTGACGAAGATTTGCAT 771404 Score = 122 bits (134), Expect = 2e-22 Identities = 138/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| |||||||| |||||||||| || || | || |||||| Sbjct 771652 ACGAGGTGGAGGGTTGACTCCTTTTGAATGTTGTAATCGGAGAGGGTGCGGCCGTCTTCG 771711 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| | || || ||||| ||||| ||||| || || || || Sbjct 771712 AGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGG 771771 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || || |||||||| || || || || || | ||||| Sbjct 771772 ATCTTGCTCTTGACGTTGTCGATAGTGTCCGAGGACTCAACCTCGAGCGTGATGGTCTTG 771831 Query 195112 CCTGT 195116 || || Sbjct 771832 CCCGT 771836 Score = 107 bits (118), Expect = 4e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || || || || || || || || ||||| || | || || | |||||| || Sbjct 771424 ACGAGATGGAGGGTCGATTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGCCCATCCTCA 771483 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| | || || ||||| ||||||||||| || || || || Sbjct 771484 AGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGG 771543 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || || || || |||||| || || || | ||| | ||||| Sbjct 771544 ATCTTGCTCTTGACATTGTCGATAGTATCCGAAGACTCGACCTCCAAGGTGATGGTCTTA 771603 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||||| ||||| | ||||| Sbjct 771604 CCCGTGAGGGTTTTGACGAAGATCTGCAT 771632 >seq17 Length=926260 Score = 100 bits (110), Expect = 6e-16 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 160589 TTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATTGG 160648 |||||||| | |||| ||||||| ||||||||| | || |||| ||||| || ||| Sbjct 106901 TTCTACGCTTTGTGGATCCCCGATCTCTTCATGAAGCGCGTCCAAGAGAATGGTGAATGG 106842 Query 160649 AGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCGAG 160708 | || |||||||||||||| || ||||| |||| |||||||| ||| ||||||||| Sbjct 106841 ACGCTGTTCTGTCCCAATGAGGCTCCTGGTCTTGCCGATGTTTACGGTGATGAGTTCGAG 106782 >seq16 Length=934283 Score = 91.5 bits (100), Expect = 3e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || || ||||| || || || ||||| |||| ||||| | || || |||||||| Sbjct 373766 GTGGAGCGTTGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCCTCGAGCTG 373825 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| || || || ||||| || |||||||| || || || || || || Sbjct 373826 CTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTATCCTGGATCTT 373885 Query 195057 TTGCTTGACGTTCTC 195071 |||||| || || Sbjct 373886 GGACTTGACATTGTC 373900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109480619148923