Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016- 05-18] 69 sequences; 38,501,010 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq6 113 4e-19 >seq6 Length=1708680 Score = 113 bits (124), Expect = 4e-19 Identities = 132/178 (74%), Gaps = 3/178 (2%) Strand=Plus/Minus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 |||||||| || || || || |||||||| ||||||||||| || |||||||| | ||| Sbjct 534141 ACTGTACCCGCCTACTTCAACGACTCACAGCGTCAAGCTACCAAGGATGCTGGTCTCATT 534082 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 || || || || || || ||||| ||||| || ||||| || ||||| | || ||||| Sbjct 534081 GCCGGCCTCAACGTCCTCCGTATCATCAACGAGCCTACCGCCGCTGCCATCGCCTATGGT 534022 Query 550529 CTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATT---GTGGAGGTA 550583 ||||| || | | | | ||| | ||||| |||||||| || | |||| |||| Sbjct 534021 CTTGACAAGAAGACTACTGGAGAGCGCAATGTCCTCATCTTCGACTTGGGTGGTGGTA 533964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029292350968810