Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016- 05-18] 69 sequences; 38,501,010 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq6 89.7 4e-13 >seq6 Length=1708680 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || || || || ||||| ||||| ||||| ||| | ||| |||| || Sbjct 771196 ACCAAGTGGAGTGTAGATTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGACCGTCCTCG 771255 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| || || || |||| ||||| ||||| | ||||| ||||||||||| Sbjct 771256 AGCTGCTTTCCTGCGAAGATCAAGCGCTGCTGATCTGGGGGAATACCCTCCTTGTCTTGG 771315 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 || || ||||| | | | | ||||||| || ||||| | || || || ||| Sbjct 771316 ATTTTGCTCTTTACGTTATCAATGGTATCTGACGATTCGACCTCGAGGGTGATGGTCTTT 771375 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || | ||| || || || || ||||| Sbjct 771376 CCTGTGAGAGTCTTGACGAAGATTTGCAT 771404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937279655287