Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016- 05-18] 69 sequences; 38,501,010 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq17 244 2e-59 seq18 170 4e-37 >seq17 Length=926260 Score = 244 bits (270), Expect = 2e-59 Identities = 866/1339 (65%), Gaps = 43/1339 (3%) Strand=Plus/Plus Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966 |||||||| | ||||| ||||| | |||||| | | ||| | ||| || ||||| Sbjct 105967 GGGTTGACGACTTGGAACTCACCAGCGAGCACACGGCGGGAGTAGATGTTCGATGTGTAT 106026 Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026 ||||| | || ||||||||| || || ||||| | || || || |||||||| || Sbjct 106027 GGCTCAAAGCACTCGTTGTTTCCGAGGATCTGAGAGGTAGATGCAGTTGGCATGGGTGCA 106086 Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCC 213086 | || ||| ||| | || || |||| | || | || ||||||||| Sbjct 106087 ATCAAAAGAGAGTTGCGAACACCATGCTGAGCAATCTTCTCCTTCAGGGAGGCCCAGTCC 106146 Query 213087 CATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTG 213146 || |||| || ||| || ||||||||||| |||| | || || | Sbjct 106147 CA-----CAGATCAGTAGGAGTC----ACATTCCACATGTCGTACTGAAGAATACCCTGA 106197 Query 213147 CTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGAC 213206 ||| || |||| ||| | ||| ||||| | |||||||| | || || || Sbjct 106198 GACACTGGCGAACCCTCGTAGGTCTGGTATGGGCCGAGTTCCTTGGCGATGTCACAAGAT 106257 Query 213207 GCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCT 213266 | ||||| |||| |||||||||||| || |||| |||||||||||||||||||| Sbjct 106258 GAAGTGAGGGCGGCGTGGTAGATGGTTTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCT 106317 Query 213267 GGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATG 213326 || ||| |||||||| || |||| ||||||| || || ||||| || ||| Sbjct 106318 GGCGACTCGAAGGGCAAGCGCAGAGCCAGGAAAGCATCAGCAAGACCTTGGACACCCATG 106377 Query 213327 CCGATGGGTCTGTGTCTCAGGTTAGACTTGGA---GCACTCCTCCAAGGGGTAAAAGTTG 213383 || || || ||||| | | ||| || || || |||||| | ||||| |||| Sbjct 106378 CCAATAGGCCTGTGGCGGAAGTT--GCTGCGACGTGC-CTCCTCGACTGGGTAGTGGTTG 106434 Query 213384 CAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCG 213443 |||||||||||||| | ||||| ||| | || | |||||| | | || | | | Sbjct 106435 ACCTCGATGATCTTGTTCAAATTGCGAGTGACAACCTGGGTGACCTCGTGAAGCTTTTGG 106494 Query 213444 TGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTG 213503 | |||| || | | || | ||||| || || || | | || || ||| Sbjct 106495 AAGTCGAACTCGCCACGCTTGTAATCAACAAAGGATGGGAGAGCAAGGGAAGCAAGATTG 106554 Query 213504 CAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCAT 213563 || || |||||||| | || | |||||||| |||||||| ||||| |||||| || | Sbjct 106555 CAGACAGCCACCTCGTCAGGAGCAGTGTACTCGATGATCTCAGTGCAGAGGTTGGAGCTT 106614 Query 213564 CGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATG 213623 ||||| || |||||||||| ||||| ||| |||| | ||||||||||||||| Sbjct 106615 CGGATAGTACCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATG 106674 Query 213624 TAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGAGGTACCTGGCCT 213681 | ||| || ||||| ||| | | | || | |||| ||| || | | ||| Sbjct 106675 AAAGGGTTACCAGTCTCGGTCTGCGCCTCGAGAA--TGGCATACCAAAGCTTCTGGGCAC 106732 Query 213682 TGAC-----CACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTT 213736 ||| ||| | || |||| |||||| | | ||||||||| | Sbjct 106733 GGACGGTTTCACGACCACGA-TTCTCC-------TTCTCGTAGCGGTGGTAGAGCTCCTC 106784 Query 213737 GAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGA-CAGGATGCGGGACACATGAGGCTCC 213795 ||| || | || | || | | || || ||| | || |||||| | || ||| Sbjct 106785 GAACTCATCACCGTAAACATCGGCAAGACCAGGAGCCTCAT-TGGGACAGAACAGCGTCC 106843 Query 213796 AGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACA 213855 | || || | ||| ||| | || |||||| || || |||| ||||| ||| ||| | Sbjct 106844 ATTCACCATTCTCTTGGACGCGCTTCATGAAGAGATCGGGGATCCACAAAGCGTAGAAGA 106903 Query 213856 GGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGA 213915 | || | | | ||| ||| || ||| ||||||| || || ||| | |||| Sbjct 106904 GATCACGAGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAAGTCAAGGAAGCCGAAGA 106963 Query 213916 TGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCT 213972 || |||||||| ||||| | |||||||||||||| || | || | ||||| |||| Sbjct 106964 CATCGGCGTGCCATGGCTCAAGATAGATGGCAAAGGCACCGGGACGCTTGTTGCCACCCT 107023 Query 213973 GGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACT 214032 |||| || | || ||||| ||| || || | || | || || || || Sbjct 107024 GGTCAACGTAACGTGCTGTGTTGTTGTAGACACGGAGCATAGGAATGAGACCATTCGAAG 107083 Query 214033 GTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCC--TCAGGTTGCTCATGGAGAGCCC 214090 ||||||||| || | || || ||||| | ||| | | | || || | ||| || Sbjct 107084 TTCCGTTGGTGCCACCGATGTAGGAGCCTGTGGCACGGATACGATG--CACGTTGAGGCC 107141 Query 214091 TATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGC 214150 || || || || ||||||||||| ||| ||| | ||| || || ||| ||| | Sbjct 107142 AATACCGCCAGCAGTCTTGGAGATCAAGGCACAGGTCTTCAGTGTGTCGTAGATACCGTC 107201 Query 214151 CATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTG-GGGCCTGGACGAGC 214209 |||||||| ||| | | || | | ||||||| || | ||| ||| |||| | || Sbjct 107202 AATGCTGTCCTCTTTCATGTCAATGAGGAAGCAGGAGGACATCTGAGGGGATGGA-GTGC 107260 Query 214210 CAGAGTTGAAAAGCGTGGG 214228 | | |||||| ||||| || Sbjct 107261 CTGCGTTGAAGAGCGTCGG 107279 >seq18 Length=888533 Score = 170 bits (188), Expect = 4e-37 Identities = 343/507 (68%), Gaps = 15/507 (3%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || || || | ||||| |||||||| ||||| || | | |||||||||||| Sbjct 234339 CTGGTAATCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCTAGCGAGATGTTCTC 234398 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAG 47958 ||||||| ||||||||||| | || || ||| || ||| | |||||| Sbjct 234399 CATGAAGTCGAAGGGGTTGGTGGCATTGTAGACCTTGGTGTTGCCGAGAGCCAACAGCAG 234458 Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018 | |||| || ||| |||| ||||| | |||| |||||| |||||| || | || | Sbjct 234459 GCGATCGGCAACGAACTCAATGTACTGGCACATAAGGGTGGCGTTCATACCAAGAAGTGC 234518 Query 48019 CACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTG 48078 ||| | ||||| | | ||||| | ||| || || || || | || Sbjct 234519 GCAGGGGAGAGCCTCGCTCAAGAACTCTTGCTCAATTGTGACAGCCTCAGTGATGATGGC 234578 Query 48079 CTTAACGCGGGACTC-----TGAGG-GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCA 48132 || || ||||| || || | |||||| | || | |||||| ||| Sbjct 234579 CTGGACA---GACTCCTTGCTGGGGCGGTTGTTGAGAAGA------GAGAAGAGCAGGCA 234629 Query 48133 GGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACC 48192 || || || | |||| || ||||| ||| ||||||| |||||||||| ||||| Sbjct 234630 TGCGAAATCAGTATGCATACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAATGTCAGACC 234689 Query 48193 AGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGAT 48252 ||||| | || | || |||||||| || || | ||| || ||||| ||||||||| Sbjct 234690 TGGCATCAGACCACGCTTCTTGAGCCAAAAGATGGACGCAAAGGAGCCGCTGAAGAAGAT 234749 Query 48253 GCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGAT 48312 ||||||||| || || || ||| ||| | | |||||| || ||||||||| ||||| Sbjct 234750 GCCCTCCACGGCAGCAAATGCGACGAGACGGTTGGCGAAAGTAGAGTTCTTGTCAGAGAT 234809 Query 48313 CCAGGAAAGCGCCCAGTCTGCCTTCTT 48339 ||| ||| ||||| || |||||||| Sbjct 234810 CCATCGAAGGGCCCAATCAGCCTTCTT 234836 Score = 84.2 bits (92), Expect = 4e-11 Identities = 170/250 (68%), Gaps = 3/250 (1%) Strand=Plus/Plus Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 |||| ||||| | ||||| || ||||||||| ||||||||| | ||||| | Sbjct 234974 TCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGTGCCTCGGGGA 235033 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548 || ||||| ||| || | ||| | || ||||| ||||| || || || || |||| Sbjct 235034 TTTGTACTTCGCCGGAAAAGCGCTCGACGAGGTTCTCGTTGACAATGCCGTCGGAGGCAG 235093 Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGA-GCAT--TCC 48605 | |||||||| ||||| || | ||| |||||||| || | | | || | ||| Sbjct 235094 CGAAGAAGGCGAGGACGTGGGAGATGAAGAAGCGCTCGTCGTCGTTCAATCGCTTGTTCC 235153 Query 48606 AGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTT 48665 || | || | || ||| || || | ||| || ||||||||||||| || || | Sbjct 235154 AGTCATGGAGATCCTTGGAAAGATCAATTTCCTCAGCAGTCCAGAAGGAAGCCTCGGCCT 235213 Query 48666 TTTTGTACAT 48675 | |||||||| Sbjct 235214 TCTTGTACAT 235223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931531996552960