Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq17 203 6e-47
seq18 156 8e-33
>seq17
Length=926260
Score = 203 bits (224), Expect = 6e-47
Identities = 724/1117 (65%), Gaps = 31/1117 (3%)
Strand=Plus/Plus
Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGA 221476
|| ||||| |||||||||||||| || |||||| ||||||| |||||||||| ||
Sbjct 106261 GTGAGGGCGGCGTGGTAGATGGTTTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCTGGC 106320
Query 221477 GAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCG 221536
|| |||||||| ||||| | | || | || || || || || || || || ||
Sbjct 106321 GACTCGAAGGGCAAGCGCAGAGCCAGGAAAGCATCAGCAAGACCTTGGACACCCATGCCA 106380
Query 221537 ATGGGCCTGTGTCTCCTGTTGGAAGCGGCC-GCTTCTGGCACGGGATAAAAGTTGACGTC 221595
|| |||||||| | |||| ||| | || || || || || |||||| ||
Sbjct 106381 ATAGGCCTGTGGCGGAAGTTGCT-GCGACGTGCCTCCTCGACTGGGTAGTGGTTGACCTC 106439
Query 221596 GATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATT 221655
||| | ||||| | || |||||| || | |||||| ||||| |||
Sbjct 106440 GATGATCTTGTTCAAATTGCGAGTGACAACCTGGGTGACCTCGTGAAGCTTTTGG----- 106494
Query 221656 GAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGC 221715
|| | |||||||| | | || || ||||| | || |||| | ||
Sbjct 106495 -AAGTCGAACTCGCCACGCTTGTAA------TCAACAAAGGATGGGAGAGCAAGGGAAGC 106547
Query 221716 CAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTT 221775
|| || || || ||||||||||| || |||| |||||||| || ||||||||
Sbjct 106548 AAGATTGCAGACAGCCACCTCGTCAGGAGCAGTGTACTCGATGATCTCAGTGCAGAGGTT 106607
Query 221776 GCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTA 221835
| || ||| || ||||||| || || || ||| | ||| |||||||||||
Sbjct 106608 GGAGCTTCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTA 106667
Query 221836 GAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCT 221895
|||||| || || |||||||| ||| ||| | ||||| | ||| || | |||
Sbjct 106668 GAGCATGAAAGGGTTACCAGTCTCGGTCTGCGCCTCGAGAATGGCATACCAAAGCT-TCT 106726
Query 221896 GG-CGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGT 221954
|| | | || || || ||| ||| | ||| || || | | |||||| |
Sbjct 106727 GGGCACGGACGGTT-TCACGAC--CACGATTCTCCTTCTCGTAGCGGTGGTAGAGCTCCT 106783
Query 221955 CAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCC 222014
| |||| |||||||| | ||| | || || ||| | |||||| | ||| |||
Sbjct 106784 CGAACTCATCACCGTAAACATCGGCAAGACCAGGAGCCTCATTGGGACAGAACAGCGTCC 106843
Query 222015 AGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGA 222074
| | || |||| ||| | || ||||||||| || |||||||||| || | ||||
Sbjct 106844 ATTCACCATTCTCTTGGACGCGCTTCATGAAGAGATCGGGGATCCACAAAGCGTAGAAGA 106903
Query 222075 GATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAA 222134
|||| | | || ||| ||| ||||| ||| || | || || | || | || |
Sbjct 106904 GATCACGAGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAAGTCAAGGAAGCCGAAGA 106963
Query 222135 TGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCT 222194
|| |||||||| ||||| ||||||| ||| | || ||||| ||||||||||||||||
Sbjct 106964 CATCGGCGTGCCATGGCTCAAGATAGATGGCAAAGGCACCGGGACGCTTGTTGCCACCCT 107023
Query 222195 GATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGAT 222253
| | || | | | | | | |||| ||| || || | || | || || || ||
Sbjct 107024 GGT-CAACGTAACGTGCTGTGTTGTTGTAGACACGGAGCATAGGAATGAGACCATTCGAA 107082
Query 222254 CGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTAC--TG-GCAGACATG 222310
||||||||||| ||||| | || ||| | || ||| || | | |
Sbjct 107083 GTTCCGTTGGTGCCACCGATGTAGGAGCCTGTGGCAC---GGATACGATGCACGTTGAGG 107139
Query 222311 CCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCC 222370
|| ||||| || || || ||||||| ||| ||| |||| || ||||| ||| ||
Sbjct 107140 CCAATACCGCCAGCAGTCTTGGAGATCAAGGCACAGGTCTTCAGTGTGTCGTAGATACCG 107199
Query 222371 TCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGA- 222429
|| || |||||| || | || | || || || || |||||||||| | ||||
Sbjct 107200 TCAATGCTGTCCTCTTTCATGTCAATGAGGAAGCAGGAGGACATCTGAG--GGGATGGAG 107257
Query 222430 -ACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGT 222488
| ||||| || ||||| || ||||||||||||||| | ||||| ||||
Sbjct 107258 TGCCTGCGTTGAAGAGCGTCGGCGAGGCGTGTGTAAAGTACTTCTGTGACATGTAGTCGT 107317
Query 222489 ACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAAT 222525
||||||| | | | | |||||| | ||||||||
Sbjct 107318 ACGTCTCAATGGCCTTCTCGATGTCATTGCCGTGAAT 107354
>seq18
Length=888533
Score = 156 bits (172), Expect = 8e-33
Identities = 311/466 (67%), Gaps = 9/466 (2%)
Strand=Plus/Minus
Query 25859 AGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCA 25918
||| | |||| || | | | || || || || |||||||| |||||||||||||| ||||
Sbjct 234799 AGAACTCTACTTTCGCCAACCGTCTCGTCGCATTTGCTGCCGTGGAGGGCATCTTCTTCA 234740
Query 25919 GCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACT 25978
|||| || |||||| ||||||| ||||||||| || || ||||| || ||| |
Sbjct 234739 GCGGCTCCTTTGCGTCCATCTTTTGGCTCAAGAAGCGTGGTCTGATGCCAGGTCTGACAT 234680
Query 25979 TTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCT 26038
| ||||||||||||||| | | ||||||||| | || | ||||| || ||||||||||
Sbjct 234679 TCTCCAACGAGCTCATCTCCCGCGACGAGGGTATGCATACTGATTTCGCATGCCTGCTCT 234620
Query 26039 ACACGGGCCACTTGCTCCACAA--ACCTTCTCAA-GAGACCGTCTACAGTATCATCAAAG 26095
| | ||| ||| |||| || ||| ||| | ||| | ||||||| |
Sbjct 234619 TC-----TCTCTT-CTCAACAACCGCCCCAGCAAGGAGTCTGTCCAGGCCATCATCACTG 234566
Query 26096 AGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCA 26155
||||||| || ||| | ||||| | || |
Sbjct 234565 AGGCTGTCACAATTGAGCAAGAGTTCTTGAGCGAGGCTCTCCCCTGCGCACTTCTTGGTA 234506
Query 26156 TGAACAACAGACTCATGAGCCAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGC 26215
||||| || || ||| |||| |||||||||| || ||||| | ||||||| |
Sbjct 234505 TGAACGCCACCCTTATGTGCCAGTACATTGAGTTCGTTGCCGATCGCCTGCTGTTGGCTC 234446
Query 26216 TGGGACTCGCCAGACTCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGT 26275
| || | ||| |||||| | | | ||||| |||||||| ||||| ||||| |||
Sbjct 234445 TCGGCAACACCAAGGTCTACAATGCCACCAACCCCTTCGACTTCATGGAGAACATCTCGC 234386
Query 26276 TGGAAGGGAAGACCAACTTCTTTGAAAAGAGGGTCGGCGACTATCA 26321
| | || |||||||||||||| || ||| | || || || || ||
Sbjct 234385 TAGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGATTACCA 234340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928843998871360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |