Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016- 05-18] 69 sequences; 38,501,010 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq17 331 1e-85 >seq17 Length=926260 Score = 331 bits (366), Expect = 1e-85 Identities = 1129/1738 (65%), Gaps = 31/1738 (2%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 ||||| ||||| | ||||| ||||| ||||||| ||||| | ||||| || | | Sbjct 107387 CCACAACACATGCTGATGCGTGTCGCTGTCGGCATTCACGGCAATGACATCGAGAAGGCC 107328 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | ||||| |||||| | ||||| || | ||| || | ||||| | || || ||||| Sbjct 107327 ATTGAGACGTACGACTACATGTCACAGAAGTACTTT-ACACACGCCTCGCCGACGCTCTT 107269 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| || || || ||| || ||||||||| |||||||| || | || || ||||| Sbjct 107268 CAACGCAGGCACTCCATCCCCTCAGATGTCCTCCTGCTTCCTCATTGACATGAAAGAGGA 107209 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 | || |||||||||| | || || | | ||||| ||||| ||| ||||| Sbjct 107208 CAGCATTGACGGTATCTACGACACACTGAAGACCTGTGCCTTGATCTCCAAGACTGCTGG 107149 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-ACA 75508 |||||||| | || | ||| | | | |||| | ||| || |||| || || Sbjct 107148 CGGTATTGGCCTCAACGTGCATCGTATCCGTGCCAC--AGGCTCCTACATCGGTGGCACC 107091 Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568 || || || ||||| | ||||| ||||| || || | ||| |||||| || || Sbjct 107090 AACGGAACTTCGAATGGTCTCATTCCTATGCTCCGTGTCTACAACAACACAGCACGTTAC 107031 Query 75569 GTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGG 75622 || | || | || ||||| | || || | || |||| | || |||||| Sbjct 107030 GTTGACCAGGGTGGCAACAAGCGTCCC---GGTGCCTTTGCCATCTATCTTGAGCCATGG 106974 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 || |||||| || | | |||||||| || || ||||| || | ||||||| || Sbjct 106973 CACGCCGATGTCTTCGGCTTCCTTGACTTGCGCAAGAACCACGGCAAGGAAGAGGTCCGC 106914 Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742 | | |||||||| | | ||||||| || || || ||||||||||| || | ||| Sbjct 106913 GCTCGTGATCTCTTCTACGCTTTGTGGATCCCCGATCTCTTCATGAAGCGCGTCCAAGAG 106854 Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGT 75802 |||| ||||| | || |||||||| | |||| || ||||| |||| | ||| Sbjct 106853 AATGGTGAATGGACGCTGTTCTGTCCCAATGAGGCTCCTGGTCTTGCCGATGTTTACGGT 106794 Query 75803 GAGGAGTTTGAAGCCCTCTACACAAAG-TATGAAGAGGAGGGTAGAGCCAATGCGACTGT 75861 || ||||| || | |||||| || | || || ||||| | | | || || || Sbjct 106793 GATGAGTTCGAGGAGCTCTAC-CACCGCTACGAGAAGGAGAATCGTGGTCGTGAAACCGT 106735 Query 75862 ACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCAT 75920 | ||| | || | ||||| | || |||||| | | ||||| |||||||| | || | Sbjct 106734 CCGTGCC-CAGAAGCTTTGGTATGCCATTCTCGAGGCGCAGACCGAGACTGGTAACCCTT 106676 Query 75921 ATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCA 75980 ||||| |||||||| || || |||| |||||| ||||| ||||| |||| || ||| Sbjct 106675 TCATGCTCTACAAGGACGCCTGCAACAGGAAGAGCAACCAGAAGAACCTGGGTACTATCC 106616 Query 75981 AGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTT 76040 ||||| || || ||||| || || | |||||||| | | || ||| |||||| | Sbjct 106615 GAAGCTCCAACCTCTGCACTGAGATCATCGAGTACACTGCTCCTGACGAGGTGGCTGTCT 106556 Query 76041 GCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATT 76100 ||||| | || || | || || ||| | ||| || | || | || || || | Sbjct 106555 GCAATCTTGCTTCCCTTGCTCTCCCATCCTTTGTTGATTACAAGCGTGGCGAGTTCGACT 106496 Query 76101 ATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACA 76160 |||| ||||| || |||| || |||| || ||| | ||| |||| || Sbjct 106495 TCCAAAAGCTTCACGAGGTCACCCAGGTTGTCACTCGCAATTTGAACAAGATCATCGAGG 106436 Query 76161 GAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTT 76220 || || || || ||| || || || | || ||||| |||||||| Sbjct 106435 TCAACCACTACCCAGTCGAGGAGGCACGTCGCAGCAACTTCCGCCACAGGCCTATTGGCA 106376 Query 76221 TGGGTGTTCAAGGTCTCGCGGATGTATTTAT-TTTGTGCCGCTACGCATTTGATTCAGAT 76279 ||||||| |||||||| || |||| || | | || |||| | || || || Sbjct 106375 TGGGTGTCCAAGGTCTTGCTGATGCTTTCCTGGCTCTG-CGCTTGCCCTTCGAGTCGCCA 106317 Query 76280 GAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCG 76339 || |||||| || | || | ||||| |||||||| || ||||| |||| | Sbjct 106316 GAGGCCAAGAAGCTCAACATCCAGATCTTCGAAACCATCTACCACGCCGCCCTCACTTCA 106257 Query 76340 AGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCC 76399 |||||| | || | | | || | || |||| | |||||||| || | ||| Sbjct 106256 TCTTGTGACATCGCCAAGGAACTCGGCCCATACCAGACCTACGAGGGTTCGCCAGTGTCT 106197 Query 76400 CAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAAC--TACGACTGGG 76457 || || | ||||||| || |||| |||| |||| || | || | | | ||||||| Sbjct 106196 CAGGGTATTCTTCAGTACGACATGT-GGAATGTGACTCCTA-CTGATCTGTGGGACTGGG 106139 Query 76458 ATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAA 76517 || ||||| || || | ||| |||| ||| ||||||||| ||||| | Sbjct 106138 CCTCCCTGAAGGAGAAGATTGCTCAGCATGGTGTTCGCAACTCTCTTTTGATTGCACCCA 106079 Query 76518 TGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAA 76577 ||||||| || || ||| | || ||| | || || || || |||||||| ||||||||| Sbjct 106078 TGCCAACTGCATCTACCTCTCAGATCCTCGGAAACAACGAGTGCTTTGAGCCATACACAT 106019 Query 76578 CAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCG 76637 | ||||||||| | | ||||| |||||||| | |||||| || Sbjct 106018 CGAACATCTACTCCCGCCGTGTGCTCGCTGGTGAGTTCCAAGTCGTCAACCCATGGCTGC 105959 Query 76638 TCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAG 76697 | || || || | || ||||| ||||| || | |||||| ||| || | || Sbjct 105958 TTAAGGATCTGGTCGATATGGGTCTGTGGTCTGAGAACATGAAGAATCGTATCATTGCAG 105899 Query 76698 CGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAATCTCTACCGCA 76757 ||||| ||||| ||| || | | || || || || | ||||| ||| ||| | Sbjct 105898 AAGGTGGCTCCATCCAACGCATTCCCAACATTCCTGAAGAGACCAAGACTCTTTACAAGA 105839 Query 76758 CAGTGTGGGAAATC---AAGATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGCT 76814 | || ||||||||| || ||| | |||| | ||||| || || |||||| || Sbjct 105838 CTGTTTGGGAAATCTCTCAG-CGAACCA--TCATCCAGATGGCTGCTGACCGTGGTGCCT 105782 Query 76815 TCATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGCTCT 76874 |||| ||||| ||| | | || | |||| | || || ||| |||| || Sbjct 105781 TCATCGATCAGTCTCAGTCTCTCAACATCCACATGAAGGAGCCTACTATGGGCAAGATCA 105722 Query 76875 CTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTATCTCCG 76932 | || ||||| | | ||||| | || ||||| || || |||||||| ||||| Sbjct 105721 CGTCGATGCACTTTGCTGGTTGGAAGCTTGGTCTCAAGACGGGCATGTACTACCTCCG 105664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569085458720