Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq6 279 7e-70
seq17 143 4e-29
seq15 125 9e-24
seq2 111 2e-19
seq29 86.0 8e-12
>seq6
Length=1708680
Score = 279 bits (308), Expect = 7e-70
Identities = 478/691 (69%), Gaps = 7/691 (1%)
Strand=Plus/Minus
Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358
|| || ||||||||||| || || || ||||| || || || | | | |||| ||
Sbjct 534558 GCGATCGGTATCGATTTGGGTACGACCTACTCGTGCGTAGGCATCTTCCGTGATGACCGC 534499
Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418
| ||||| ||| | || ||||| |||||||| || ||||| |||| ||| || || ||
Sbjct 534498 ATCGAGATCATCGCCAACGACCAGGGAAACCGCACCACTCCCTCGTTCGTGGCTTTCACC 534439
Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478
|| | ||| || ||| | || || | || || || ||| || ||||||||||||||
Sbjct 534438 GACACTGAGCGCCTCATCGGTGACTCGGCCAAGAACCAGGTCGCCATGAACCCTATCAAC 534379
Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538
|||||||| ||||| ||||| || || ||||||||||| | ||| | ||||| | |
Sbjct 534378 ACTGTCTTCGACGCAAAGCGCCTCATCGGTCGCAAGTTCGCCGATGCTGAGGTCCAGGCC 534319
Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTC--CCGGTGTGGCTGATAAGCCTATGATTA 195596
|| || ||| | | | | | ||| | || | | ||||| |||||| | ||
Sbjct 534318 GACATGAAGCATTTCCCCT-TCAAGGTCGTCGACAAGGGTGGC----AAGCCTGTCATCC 534264
Query 195597 ATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGT 195656
| || || || | || ||| |||| || | ||||| || || || || |||||
Sbjct 534263 AGGTCGAGTTCAAGGGCGAGGAGAAGACCTTCACCCCCGAGGAGATCTCATCCATGGTCC 534204
Query 195657 TGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTG 195716
||| ||||||| ||||||||| || || | | | || || || || | || || |
Sbjct 534203 TGACCAAGATGAGGGAGACTGCCGAGTCCTACCTTGGCTGCACCGTCAACAACGCTGTCG 534144
Query 195717 TGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTA 195776
| |||||||| || ||||||| || ||||| || || || || ||||| |||| | |
Sbjct 534143 TCACTGTACCCGCCTACTTCAACGACTCACAGCGTCAAGCTACCAAGGATGCTGGTCTCA 534084
Query 195777 TTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATG 195836
|||| || || ||| || | || ||||| || || || || ||||| || || ||||
Sbjct 534083 TTGCCGGCCTCAACGTCCTCCGTATCATCAACGAGCCTACCGCCGCTGCCATCGCCTATG 534024
Query 195837 GTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTA 195896
|||| |||||||| | | ||| ||||| | ||||| || | ||||||||||
Sbjct 534023 GTCTTGACAAGAAGACTACTGGAGAGCGCAATGTCCTCATCTTCGACTTGGGTGGTGGTA 533964
Query 195897 CGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTG 195956
| || ||||| || || | | ||| || | ||||| ||||| || ||| | || || |
Sbjct 533963 CTTTCGATGTTTCTCTCTTGACTATCGAGGAGGGTATCTTCGAGGTCAAGTCCACCGCCG 533904
Query 195957 GTGATACTCATCTAGGTGGTGAAGATTTCGA 195987
| || |||||| | |||||||| || |||||
Sbjct 533903 GAGACACTCATTTGGGTGGTGAGGACTTCGA 533873
Score = 179 bits (198), Expect = 5e-40
Identities = 170/217 (78%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916
|| ||||||| ||||| || || ||| | || || || || ||||| || ||||||||||
Sbjct 771181 GTGGTATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACAATCACTCTAGAGGTTGAGT 771122
Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976
|||| ||||| ||||| ||| | || |||||||||||||||||| ||||| || ||||
Sbjct 771121 CGTCTGACACCATCGACAACGTAAAGAGCAAGATTCAAGATAAGGAGGGCATCCCTCCCG 771062
Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036
||||||| || ||||| || || ||||||||||| || || || || || || | || |
Sbjct 771061 ATCAGCAGCGCCTTATCTTCGCGGGTAAACAGCTCGAGGACGGTCGCACTCTTTCGGACT 771002
Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073
|||| | ||||||||||| ||||| ||| | || ||
Sbjct 771001 ACAATATCCAAAAGGAGTCCACTCTGCACTTGGTGCT 770965
Score = 172 bits (190), Expect = 7e-38
Identities = 178/233 (76%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916
|| ||||||||||||| || || || || || ||||| || |||||||||||||| || |
Sbjct 771409 GTGGTATGCAAATCTTCGTCAAGACTCTCACAGGAAAGACCATCACCCTCGAGGTCGAAT 771350
Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976
||||||| || || |||||| | || ||| || ||||| ||||| || ||||| || |
Sbjct 771349 CGTCAGATACCATTGATAACGTAAAGAGCAAAATCCAAGACAAGGAGGGTATTCCCCCAG 771290
Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036
||||||| || | || || || || || ||||| || || || || || ||| |||| |
Sbjct 771289 ATCAGCAGCGCTTGATCTTCGCAGGAAAGCAGCTCGAGGACGGTCGCACTCTCTCTGACT 771230
Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
||||| |||| ||||| ||||| || ||| | ||||| | || || ||||||
Sbjct 771229 ACAACATTCAGAAGGAATCTACACTCCACTTGGTTCTTCGTCTCCGTGGTGGT 771177
Score = 161 bits (178), Expect = 1e-34
Identities = 158/204 (77%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945
|| || || || ||||| |||||||||||||| || ||||| ||||| ||| |||| |
Sbjct 771836 ACGGGCAAGACCATCACGCTCGAGGTTGAGTCCTCGGACACTATCGACAACGTCAAGAGC 771777
Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005
||||| || |||||||| ||||| || || || ||||| || | || || || || ||
Sbjct 771776 AAGATCCAGGATAAGGAGGGCATCCCTCCTGACCAGCAGCGCTTGATCTTCGCCGGCAAG 771717
Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065
||||| ||||| || || |||||| | ||||||||| ||||||||||||| || || |||
Sbjct 771716 CAGCTCGAAGACGGCCGCACCCTCTCCGATTACAACATTCAAAAGGAGTCAACCCTCCAC 771657
Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089
|| || || | || || ||||||
Sbjct 771656 CTCGTCCTCCGCCTCCGTGGTGGT 771633
Score = 141 bits (156), Expect = 1e-28
Identities = 245/356 (69%), Gaps = 0/356 (0%)
Strand=Plus/Plus
Query 195632 CCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATG 195691
||||| |||||||| | ||||| | |||||||||||| || || ||| |
Sbjct 880649 CCCGAGGAAATTTCCGCCATGGTCCTTGGCAAGATGAAGGAGGTCGCTGAGACTTATCTC 880708
Query 195692 GGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGA 195751
||| | | || || | || || || ||||| || || ||||||| || | || ||
Sbjct 880709 GGTGAGCCAGTTAAGAACGCTGTGGTCACTGTTCCCGCCTACTTCAACGACGCCCAGCGT 880768
Query 195752 CAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAA 195811
|| ||||||||||||| |||| || ||||| ||| ||| | | |||| |||
Sbjct 880769 GCCGCCACAAAGGACGCTGGAACTATCGCCGGTCTCAACGTTCTCCGTGTCGTCAACGAA 880828
Query 195812 CCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTA 195871
|| || || || || | |||||||| || ||||||| | | | | || | ||
Sbjct 880829 CCCACCGCCGCCGCTCTCGCTTATGGCCTTGACAAGACCGATCAGAAGGAACGCCAGGTC 880888
Query 195872 TTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGT 195931
| | | ||||||||||||||||| || ||||| || | || | |||||| | ||
Sbjct 880889 CTTGTATACGATCTCGGTGGTGGTACCTTCGATGTGTCCATCCTGACTATTGAGGAGGGC 880948
Query 195932 ATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987
| ||||| || || |||| |||||||| |||||||| |||||||| ||||||||
Sbjct 880949 GTTTTCGAGGTCCAGTCTACCGCTGGTGACACTCATCTCGGTGGTGAGGATTTCGA 881004
>seq17
Length=926260
Score = 143 bits (158), Expect = 4e-29
Identities = 562/865 (65%), Gaps = 23/865 (3%)
Strand=Plus/Minus
Query 77966 ATGCGTGTTTCTATTGGTATTCATGGAAATGATATTCCAGCGGTAC-TTGAAACGTATGA 78024
|||||||| || | || ||||| || ||||| || | || | | |||| ||||| ||
Sbjct 107372 ATGCGTGTCGCTGTCGGCATTCACGGCAATGACAT-CGAGAAGGCCATTGAGACGTACGA 107314
Query 78025 TAAAATGTC-CAATGGTATGTTTATTCACGCAACACCTACTTTGTTTAATGCAGGTACTC 78083
| ||||| || ||| |||| ||||| | || || | || || ||||| ||||
Sbjct 107313 CTACATGTCACAGAAGTAC-TTTACACACGCCTCGCCGACGCTCTTCAACGCAGGCACTC 107255
Query 78084 CCCGTCCACAGATGTCATCTTGTTTCCTACTTGCAAATAAGGAGGACTCTATTAATGGTA 78143
| || |||||||| || || ||||| ||| | || |||||| ||| | ||||
Sbjct 107254 CATCCCCTCAGATGTCCTCCTGCTTCCTCATTGACATGAAAGAGGACAGCATTGACGGTA 107195
Query 78144 TATACGGGACTCTCACAGAG-TGTGCTCAGATTTCTAAGTGGGCTGGTGGTATAGGTCTT 78202
| |||| || || | ||| ||||| ||| || ||| ||||| ||||| || ||
Sbjct 107194 TCTACGACACACTGA-AGACCTGTGCCTTGATCTCCAAGACTGCTGGCGGTATTGGCCTC 107136
Query 78203 CATATTCACGATGTTCGTGCAAACAAG-TCCAGGATTAGAGGAACTAATGGTCAGTCTGA 78261
| | || | | ||||| | || | ||| || | || || || || || |
Sbjct 107135 AACGTGCATCGTATCCGTGCCA-CAGGCTCCTACATCGGTGGCACCAACGGAACTTCGAA 107077
Query 78262 TGGAATTATTCCTATGCTTAGGGTATTCAATGCTACAGCACGCTATGTCAACCAAGCGGG 78321
||| | ||||||||||| | || | ||| |||||||| || || |||| |||
Sbjct 107076 TGGTCTCATTCCTATGCTCCGTGTCTACAACAACACAGCACGTTACGTTGACCA---GGG 107020
Query 78322 TCGTAGGAAGGG-----GT-CATTCGCTATGTACCTTGAACCTTGGCACGCCGATGTAAT 78375
| | | ||| | || | || || || || ||||| || |||||||||||||| |
Sbjct 107019 TGGCAACAAGCGTCCCGGTGCCTTTGCCATCTATCTTGAGCCATGGCACGCCGATGTCTT 106960
Query 78376 -GGATTTTTTGGAACTT-CGTCTCAACCAGGGTGACGAGGAAGCTCGATGCAGGGATTTA 78433
|| || ||| |||| || ||||| || | || || | || | ||| |
Sbjct 106959 CGGCTTCCTTG--ACTTGCGCAAGAACCACGGCAAGGAAGAGGTCCGCGCTCGTGATCTC 106902
Query 78434 TTCACTGCTATGTGGATTCCGGATCTTTTTATGAAGAGAGTTGAGGAAGGAGGTAAATGG 78493
||| ||| ||||||| || ||||| || |||||| | || | || ||| |||||
Sbjct 106901 TTCTACGCTTTGTGGATCCCCGATCTCTTCATGAAGCGCGTCCAAGAGAATGGTGAATGG 106842
Query 78494 TCTCTTTTCTGTCCAGATAAGACTAAGGGTCTTTCAGATGTATACGGGGAAGAATTCGAA 78553
| || |||||||| || || || |||||| | ||||| ||||| || || |||||
Sbjct 106841 ACGCTGTTCTGTCCCAATGAGGCTCCTGGTCTTGCCGATGTTTACGGTGATGAGTTCGAG 106782
Query 78554 AAATTGTACACTAAATACGAAGAGGAAGGTCTCGCTATTAAGACAATTGATGCATCTGAA 78613
| | ||| ||||| |||| || | | | | || | ||| | |||
Sbjct 106781 GAGCTCTACCACCGCTACGAGAAGGAGAATCGTGGTCGTGAAACCGTCCGTGC-CCAGAA 106723
Query 78614 -CTATGGAAAGCTATTATCAAAAGTCAAACAGAGACCGGCACCCCGTATATGCTATACAA 78672
|| ||| | || ||| || | || || ||||| || | ||| | ||||| |||||
Sbjct 106722 GCTTTGGTATGCCATTCTCGAGGCGCAGACCGAGACTGGTAACCCTTTCATGCTCTACAA 106663
Query 78673 AGACAGCTGTAACAGAAAGTCTAACCAAAAGAACCTAGGTGTCATCAAAAGCTCTAACCT 78732
||| ||| ||||| ||| ||||| |||||||| ||| ||| |||||| |||||
Sbjct 106662 GGACGCCTGCAACAGGAAGAGCAACCAGAAGAACCTGGGTACTATCCGAAGCTCCAACCT 106603
Query 78733 TTGCACAGAAATTCTGGAATACACGGATAAGAATGAAACAGCTGTATGTAATCTAGGGTC 78792
||||| || || | || ||||| | | | || ||||| || ||||| | ||
Sbjct 106602 CTGCACTGAGATCATCGAGTACACTGCTCCTGACGAGGTGGCTGTCTGCAATCTTGCTTC 106543
Query 78793 TATCGCTCTACCAAAGTTTGTTGAT 78817
| ||||| ||| |||||||||
Sbjct 106542 CCTTGCTCTCCCATCCTTTGTTGAT 106518
>seq15
Length=938269
Score = 125 bits (138), Expect = 9e-24
Identities = 223/326 (68%), Gaps = 6/326 (2%)
Strand=Plus/Plus
Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721
|||||||||||||| || || || | |||||| || | ||| || | || || || ||
Sbjct 545532 AAGATGAAGGAGACCGCCGAGTCCTACATGGGCAAGAATGTCAAGAACGCCGTCGTCACC 545591
Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781
|| || || ||||||| || || || || ||||| || ||||| |||| |||||
Sbjct 545592 GTGCCCGCCTACTTCAACGACTCCCAGCGCCAGGCCACCAAGGATGCTGGCCAGATTGCC 545651
Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841
||||| ||| || | || |||| || || || || ||||| |||| || |||||
Sbjct 545652 GGTCTTAACGTCCTCCGTGTTGTCAACGAGCCCACCGCAGCTGCTCTTGCCTACGGTCTC 545711
Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTT 195901
| |||||| | ||||| ||| ||| ||||| ||||||||||| ||
Sbjct 545712 G------ACAAGGCCACCGATAACGTCGTAGCTGTCTACGATCTTGGTGGTGGTACTTTC 545765
Query 195902 GATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGAT 195961
||| | || | ||| | || | ||| | || || || ||| |||| |||||
Sbjct 545766 GATATTTCCATCCTCGAGATCCAGTCTGGCGTCTTTGAGGTCAAGTCTACCAACGGTGAC 545825
Query 195962 ACTCATCTAGGTGGTGAAGATTTCGA 195987
|| ||||| |||||||| ||||||||
Sbjct 545826 ACACATCTCGGTGGTGAGGATTTCGA 545851
>seq2
Length=2710459
Score = 111 bits (122), Expect = 2e-19
Identities = 172/245 (70%), Gaps = 3/245 (1%)
Strand=Plus/Minus
Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778
|| || || || ||||||| || || || || || || |||||||| | ||||||
Sbjct 1626086 ACCGTGCCCGCCTACTTCAACGACAACCAGCGTCAAGCCACCAAGGACGCCGGTGCTATC 1626027
Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838
|| || || ||| ||| | || ||||| || || || || || || || ||||| |||
Sbjct 1626026 GCTGGCCTCAACGTTCTCCGTATCATCAACGAGCCTACCGCCGCCGCCATCGCTTACGGT 1625967
Query 195839 CTGGA---CAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895
|| | | || |||| | || | ||||| | |||| |||||||||||||||
Sbjct 1625966 CTCGGTTCCGGAAAGTCGGACAAGGAGAGGAATGTTCTCATCTACGATCTCGGTGGTGGT 1625907
Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955
|| || |||||||| ||||| | || | |||||| | ||| || ||||||||||||
Sbjct 1625906 ACTTTCGATGTCTCTCTTCTTCACATCCAGGGTGGTGTCTTCACCGTCAAGGCTACTGCT 1625847
Query 195956 GGTGA 195960
|| ||
Sbjct 1625846 GGAGA 1625842
>seq29
Length=430389
Score = 86.0 bits (94), Expect = 8e-12
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| ||||| || || ||||| || || || ||||||||||||||||| ||||| ||
Sbjct 67329 ATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCG 67388
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCA 171953
||||| ||||| || | || ||||||||||
Sbjct 67389 GACACCATCGACAATGTGAAGTCCAAGATTCA 67420
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657861832593680
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