Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq18 134 2e-25
seq2 134 2e-25
seq8 127 3e-23
seq24 109 9e-18
seq17 109 9e-18
>seq18
Length=888533
Score = 134 bits (148), Expect = 2e-25
Identities = 187/261 (72%), Gaps = 1/261 (0%)
Strand=Plus/Plus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| || || || || ||| |||||| |||||||||||||| | |
Sbjct 234326 TGACACCAGCCTTCTGGTAATCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCTA 234385
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
||||||| |||||| | ||| ||||||| | |||| ||| | ||||
Sbjct 234386 GCGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCATTGTAGACCTTGGTGTTGCCGA 234445
Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070
| | | |||||||| ||||| ||||| ||||||||||||||||| |||| ||||||||
Sbjct 234446 GAGCCAACAGCAGGCGATCGGCAACGAACTCAATGTACTGGCACATAAGGGTGGCGTTCA 234505
Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130
| || | || || ||| || | |||||| | ||||||| ||| || ||| ||||
Sbjct 234506 TACCAAGAAGTGCGCAGGGGAGAGCCTCGCTCAAGAACTCTTGCTCAATTGTGACAGCCT 234565
Query 794131 CGATGATGATCTGCCTGGGCA 794151
| ||||||| |||||| ||
Sbjct 234566 CAGTGATGAT-GGCCTGGACA 234585
Score = 87.8 bits (96), Expect = 3e-11
Identities = 108/145 (74%), Gaps = 2/145 (1%)
Strand=Plus/Plus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
||| |||||||| ||| | |||||| || || || ||||| || || |||||
Sbjct 234648 ACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAATGTCAGACCTGGCATCAGACCACGCTT 234707
Query 794400 CTTGAGCCAAAAGATGG-CACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAA 794458
||||||||||||||||| | || || ||| ||| ||||||||||| ||||| ||||
Sbjct 234708 CTTGAGCCAAAAGATGGACGCA-AAGGAGCCGCTGAAGAAGATGCCCTCCACGGCAGCAA 234766
Query 794459 AGCCGACGAGCCGCTCGGCAAAAGT 794483
| ||||||| || | ||| |||||
Sbjct 234767 ATGCGACGAGACGGTTGGCGAAAGT 234791
>seq2
Length=2710459
Score = 134 bits (148), Expect = 2e-25
Identities = 317/479 (66%), Gaps = 0/479 (0%)
Strand=Plus/Plus
Query 2018920 GGATCGAAAAGTACCGCCCGACAGTGCTCGACGACATCGTGGGCAACGAGCACGCCGTTG 2018979
|| ||||||||||||| ||| ||||||||| | || |||||| | || | |
Sbjct 50007 GGGTCGAAAAGTACCGTCCGGTCTACCTCGACGACGTAGTAGGCAACACCGAGACCATCG 50066
Query 2018980 CCTACCTCAAGGCGCTGGCCGCCGACGGCAACATGCCCAACCTCTTGCTGGCGGGCCCGC 2019039
||||||| | ||| || ||||| ||||| || | | | | || ||
Sbjct 50067 AACGCCTCAAGATCATCGCCAAGGATGGCAATATGCCACACATGATCATCTCCGGTATGC 50126
Query 2019040 CCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTGGGCGCGGCCG 2019099
| |||| ||||||||||| ||| ||||| || || ||| | |||| |
Sbjct 50127 CAGGCATCGGCAAGACCACCTCGATCCTCTGCCTCGCACGACAGCTGCTTGGCGATGTAT 50186
Query 2019100 CCGACGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTA 2019159
| | || || || ||||| ||||| || || |||||||||||| | ||||||||||| |
Sbjct 50187 ACAAGGAAGCAGTCCTCGAGCTCAACGCCTCCGACGAGCGCGGCATCGACGTCGTGCGCA 50246
Query 2019160 GAATCATCAAGCATCACGCTTCGAAAAGAATCGACCTGCCGCCCGGCCGCCACAAGGTGA 2019219
||||||| ||| ||| | | || ||||||||| ||| | || ||| ||
Sbjct 50247 ACCGCATCAAGGGATTCGCCCAGAAGAAAGTCACCCTGCCGCCAGGCAGGCAGAAGCTGG 50306
Query 2019220 TCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCA 2019279
|||| || |||||||| ||| || | ||| | || || |||||||| || || |
Sbjct 50307 TCATTCTGGATGAGGCGGACAGCATGACGAGTGGAGCTCAACAGGCCCTAAGAAGAACAA 50366
Query 2019280 TGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCA 2019339
|||| | |||| || || || ||||| | ||||||||| |||| | |||
Sbjct 50367 TGGAGATCTACAGTGCAACCACACGATTTGCTTTTGCCTGCAACCAGTCGAACAAAATCA 50426
Query 2019340 TCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAG 2019398
| || |||| || ||| || || ||| | |||| || ||||||||||| ||||||
Sbjct 50427 TTGAGCCCCTGCAATCCCGATGTGCAATCCTACGCTACGCACGCCTCACCGATGCCCAG 50485
>seq8
Length=1622497
Score = 127 bits (140), Expect = 3e-23
Identities = 97/115 (84%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
|| ||||||||||||||||||||| | |||||||| | || ||||||||||| ||||||
Sbjct 352270 GCTGCCAACTACCTCGACATCAAGGCGCTCCTCGACGTCGGCTGCAAGACCGTTGCCAAC 352211
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761
| |||||||||||||| ||||| || |||||||| || || |||||| || |||
Sbjct 352210 ATGATCAAGGGCAAGTCACCCGACGAGATCCGCAAAACATTCAACATCCAGAACG 352156
>seq24
Length=653432
Score = 109 bits (120), Expect = 9e-18
Identities = 160/225 (71%), Gaps = 6/225 (3%)
Strand=Plus/Plus
Query 2411377 TCGTCGAGA---TCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGTG 2411433
|||||||| || ||||||||| ||| || || |||||||| ||| ||| |
Sbjct 212702 TCGTCGAGGACGTCGATCTTGGAGTCGGGGTCCGAGGAACTCATCTTTCCGCCCTGG--- 212758
Query 2411434 AGGCCCGGCACCAGCGGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGG 2411493
|| || || |||| ||||| | || || ||||| |||||| | | ||||||
Sbjct 212759 AGACCGGGGACCATAGGGTTCATCAAATGTGCGCGCTCCTTGTAGCCAATCTTGGGCAGG 212818
Query 2411494 TGGTCGCGCGCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACG 2411553
|| || | || || ||||||||||| ||| |||||||| ||| | |||||
Sbjct 212819 ACATCCTTTGCCAGAGCGAAAATCTTGCGCTGATCGACACCGCCAAATTGGACATCGACA 212878
Query 2411554 TCGAGGTGCTGCTCGTCGAGGGCCTGCATGAGCGGGTAGACGAGG 2411598
||||||| |||||| || || ||||||||||||||||||| ||||
Sbjct 212879 TCGAGGTACTGCTCATCAAGTGCCTGCATGAGCGGGTAGATGAGG 212923
>seq17
Length=926260
Score = 109 bits (120), Expect = 9e-18
Identities = 180/260 (69%), Gaps = 0/260 (0%)
Strand=Plus/Plus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
|||||| || || || || |||| ||| |||| |||||||| || | || || || ||
Sbjct 107022 CTGGTCAACGTAACGTGCTGTGTTGTTGTAGACACGGAGCATAGGAATGAGACCATTCGA 107081
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
||||||||||| | | ||||| ||| | ||| || | ||| || | |||
Sbjct 107082 AGTTCCGTTGGTGCCACCGATGTAGGAGCCTGTGGCACGGATACGATGCACGTTGAGGCC 107141
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
|| ||||| || | ||||||||| | || || | ||||| || |||||||| || ||
Sbjct 107142 AATACCGCCAGCAGTCTTGGAGATCAAGGCACAGGTCTTCAGTGTGTCGTAGATACCGTC 107201
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
|| ||| | |||||||| | || ||||| || || | || ||| | |||||
Sbjct 107202 AATGCTGTCCTCTTTCATGTCAATGAGGAAGCAGGAGGACATCTGAGGGGATGGAGTGCC 107261
Query 2073780 GGCATTGAAGAGCGTGGGCG 2073799
|| ||||||||||| ||||
Sbjct 107262 TGCGTTGAAGAGCGTCGGCG 107281
Score = 102 bits (112), Expect = 1e-15
Identities = 290/448 (65%), Gaps = 18/448 (4%)
Strand=Plus/Plus
Query 2071574 ACTGGACGACCTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCTGGTT 2071631
||| || || ||| ||||| ||||||| | ||| | || |||||||||| ||||||
Sbjct 106583 ACTCGATGATCTCAGTGCAGAGGTTGGAG--CTTCGGATAGTACCCAGGTTCTTCTGGTT 106640
Query 2071632 GCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGC 2071691
||| || |||| ||||||||||| |||||| | || ||| |||||| |||||||
Sbjct 106641 GCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGAAAGGGTTACCAGTCTCGGTCTGCGC 106700
Query 2071692 CGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCG----CGGCCCT 2071747
| || ||||| |||||| || |||||| || | || || || ||
Sbjct 106701 CTCGAGAATGGCATACCAAA----GCTTCTGGGCACGGACGGTTTCACGACCACGATTCT 106756
Query 2071748 NNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGG 2071807
|||| | || || | | |||| ||| || || |
Sbjct 106757 CCTTCTCGTAGCGGTGGTAGAGCTCCTCGAACTCATCACCGTAAACATCGGCAAGACCAG 106816
Query 2071808 GCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACC---ACGCGGCGCATAA 2071864
| ||||| || || || |||| ||| || || | || | ||||| ||| |
Sbjct 106817 GAGCCTCATTGGGACAGAACAGCGTCCATTCACC---ATTCTCTTGGACGCGCTTCATGA 106873
Query 2071865 ACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGT 2071924
| || ||| |||||| |||| |||||||| || || ||| ||| ||||||||||
Sbjct 106874 AGAGATCGGGGATCCACAAAGCGTAGAAGAGATCACGAGCGCGGACCTCTTCCTTGCCGT 106933
Query 2071925 GGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGG 2071984
||||||| || ||| || || ||| || ||||||||||| ||||| || ||| ||
Sbjct 106934 GGTTCTTGCGCAAGTCAAGGAAGCCGAAGACATCGGCGTGCCATGGCTCAAGATAGATGG 106993
Query 2071985 CAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012
||||||| || |||||| ||| ||
Sbjct 106994 CAAAGGCACCGGGACGCTTGTTGCCACC 107021
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916239060155291
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |