Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016- 05-18] 69 sequences; 38,501,010 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq18 134 2e-25 seq2 134 2e-25 seq8 127 3e-23 seq24 109 9e-18 seq17 109 9e-18 >seq18 Length=888533 Score = 134 bits (148), Expect = 2e-25 Identities = 187/261 (72%), Gaps = 1/261 (0%) Strand=Plus/Plus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || || || || ||| |||||| |||||||||||||| | | Sbjct 234326 TGACACCAGCCTTCTGGTAATCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCTA 234385 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 ||||||| |||||| | ||| ||||||| | |||| ||| | |||| Sbjct 234386 GCGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCATTGTAGACCTTGGTGTTGCCGA 234445 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | | | |||||||| ||||| ||||| ||||||||||||||||| |||| |||||||| Sbjct 234446 GAGCCAACAGCAGGCGATCGGCAACGAACTCAATGTACTGGCACATAAGGGTGGCGTTCA 234505 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 | || | || || ||| || | |||||| | ||||||| ||| || ||| |||| Sbjct 234506 TACCAAGAAGTGCGCAGGGGAGAGCCTCGCTCAAGAACTCTTGCTCAATTGTGACAGCCT 234565 Query 794131 CGATGATGATCTGCCTGGGCA 794151 | ||||||| |||||| || Sbjct 234566 CAGTGATGAT-GGCCTGGACA 234585 Score = 87.8 bits (96), Expect = 3e-11 Identities = 108/145 (74%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| |||||||| ||| | |||||| || || || ||||| || || ||||| Sbjct 234648 ACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAATGTCAGACCTGGCATCAGACCACGCTT 234707 Query 794400 CTTGAGCCAAAAGATGG-CACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAA 794458 ||||||||||||||||| | || || ||| ||| ||||||||||| ||||| |||| Sbjct 234708 CTTGAGCCAAAAGATGGACGCA-AAGGAGCCGCTGAAGAAGATGCCCTCCACGGCAGCAA 234766 Query 794459 AGCCGACGAGCCGCTCGGCAAAAGT 794483 | ||||||| || | ||| ||||| Sbjct 234767 ATGCGACGAGACGGTTGGCGAAAGT 234791 >seq2 Length=2710459 Score = 134 bits (148), Expect = 2e-25 Identities = 317/479 (66%), Gaps = 0/479 (0%) Strand=Plus/Plus Query 2018920 GGATCGAAAAGTACCGCCCGACAGTGCTCGACGACATCGTGGGCAACGAGCACGCCGTTG 2018979 || ||||||||||||| ||| ||||||||| | || |||||| | || | | Sbjct 50007 GGGTCGAAAAGTACCGTCCGGTCTACCTCGACGACGTAGTAGGCAACACCGAGACCATCG 50066 Query 2018980 CCTACCTCAAGGCGCTGGCCGCCGACGGCAACATGCCCAACCTCTTGCTGGCGGGCCCGC 2019039 ||||||| | ||| || ||||| ||||| || | | | | || || Sbjct 50067 AACGCCTCAAGATCATCGCCAAGGATGGCAATATGCCACACATGATCATCTCCGGTATGC 50126 Query 2019040 CCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTGGGCGCGGCCG 2019099 | |||| ||||||||||| ||| ||||| || || ||| | |||| | Sbjct 50127 CAGGCATCGGCAAGACCACCTCGATCCTCTGCCTCGCACGACAGCTGCTTGGCGATGTAT 50186 Query 2019100 CCGACGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTA 2019159 | | || || || ||||| ||||| || || |||||||||||| | ||||||||||| | Sbjct 50187 ACAAGGAAGCAGTCCTCGAGCTCAACGCCTCCGACGAGCGCGGCATCGACGTCGTGCGCA 50246 Query 2019160 GAATCATCAAGCATCACGCTTCGAAAAGAATCGACCTGCCGCCCGGCCGCCACAAGGTGA 2019219 ||||||| ||| ||| | | || ||||||||| ||| | || ||| || Sbjct 50247 ACCGCATCAAGGGATTCGCCCAGAAGAAAGTCACCCTGCCGCCAGGCAGGCAGAAGCTGG 50306 Query 2019220 TCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCA 2019279 |||| || |||||||| ||| || | ||| | || || |||||||| || || | Sbjct 50307 TCATTCTGGATGAGGCGGACAGCATGACGAGTGGAGCTCAACAGGCCCTAAGAAGAACAA 50366 Query 2019280 TGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCA 2019339 |||| | |||| || || || ||||| | ||||||||| |||| | ||| Sbjct 50367 TGGAGATCTACAGTGCAACCACACGATTTGCTTTTGCCTGCAACCAGTCGAACAAAATCA 50426 Query 2019340 TCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAG 2019398 | || |||| || ||| || || ||| | |||| || ||||||||||| |||||| Sbjct 50427 TTGAGCCCCTGCAATCCCGATGTGCAATCCTACGCTACGCACGCCTCACCGATGCCCAG 50485 >seq8 Length=1622497 Score = 127 bits (140), Expect = 3e-23 Identities = 97/115 (84%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 || ||||||||||||||||||||| | |||||||| | || ||||||||||| |||||| Sbjct 352270 GCTGCCAACTACCTCGACATCAAGGCGCTCCTCGACGTCGGCTGCAAGACCGTTGCCAAC 352211 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | |||||||||||||| ||||| || |||||||| || || |||||| || ||| Sbjct 352210 ATGATCAAGGGCAAGTCACCCGACGAGATCCGCAAAACATTCAACATCCAGAACG 352156 >seq24 Length=653432 Score = 109 bits (120), Expect = 9e-18 Identities = 160/225 (71%), Gaps = 6/225 (3%) Strand=Plus/Plus Query 2411377 TCGTCGAGA---TCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGTG 2411433 |||||||| || ||||||||| ||| || || |||||||| ||| ||| | Sbjct 212702 TCGTCGAGGACGTCGATCTTGGAGTCGGGGTCCGAGGAACTCATCTTTCCGCCCTGG--- 212758 Query 2411434 AGGCCCGGCACCAGCGGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGG 2411493 || || || |||| ||||| | || || ||||| |||||| | | |||||| Sbjct 212759 AGACCGGGGACCATAGGGTTCATCAAATGTGCGCGCTCCTTGTAGCCAATCTTGGGCAGG 212818 Query 2411494 TGGTCGCGCGCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACG 2411553 || || | || || ||||||||||| ||| |||||||| ||| | ||||| Sbjct 212819 ACATCCTTTGCCAGAGCGAAAATCTTGCGCTGATCGACACCGCCAAATTGGACATCGACA 212878 Query 2411554 TCGAGGTGCTGCTCGTCGAGGGCCTGCATGAGCGGGTAGACGAGG 2411598 ||||||| |||||| || || ||||||||||||||||||| |||| Sbjct 212879 TCGAGGTACTGCTCATCAAGTGCCTGCATGAGCGGGTAGATGAGG 212923 >seq17 Length=926260 Score = 109 bits (120), Expect = 9e-18 Identities = 180/260 (69%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 |||||| || || || || |||| ||| |||| |||||||| || | || || || || Sbjct 107022 CTGGTCAACGTAACGTGCTGTGTTGTTGTAGACACGGAGCATAGGAATGAGACCATTCGA 107081 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 ||||||||||| | | ||||| ||| | ||| || | ||| || | ||| Sbjct 107082 AGTTCCGTTGGTGCCACCGATGTAGGAGCCTGTGGCACGGATACGATGCACGTTGAGGCC 107141 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 || ||||| || | ||||||||| | || || | ||||| || |||||||| || || Sbjct 107142 AATACCGCCAGCAGTCTTGGAGATCAAGGCACAGGTCTTCAGTGTGTCGTAGATACCGTC 107201 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 || ||| | |||||||| | || ||||| || || | || ||| | ||||| Sbjct 107202 AATGCTGTCCTCTTTCATGTCAATGAGGAAGCAGGAGGACATCTGAGGGGATGGAGTGCC 107261 Query 2073780 GGCATTGAAGAGCGTGGGCG 2073799 || ||||||||||| |||| Sbjct 107262 TGCGTTGAAGAGCGTCGGCG 107281 Score = 102 bits (112), Expect = 1e-15 Identities = 290/448 (65%), Gaps = 18/448 (4%) Strand=Plus/Plus Query 2071574 ACTGGACGACCTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCTGGTT 2071631 ||| || || ||| ||||| ||||||| | ||| | || |||||||||| |||||| Sbjct 106583 ACTCGATGATCTCAGTGCAGAGGTTGGAG--CTTCGGATAGTACCCAGGTTCTTCTGGTT 106640 Query 2071632 GCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGC 2071691 ||| || |||| ||||||||||| |||||| | || ||| |||||| ||||||| Sbjct 106641 GCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGAAAGGGTTACCAGTCTCGGTCTGCGC 106700 Query 2071692 CGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCG----CGGCCCT 2071747 | || ||||| |||||| || |||||| || | || || || || Sbjct 106701 CTCGAGAATGGCATACCAAA----GCTTCTGGGCACGGACGGTTTCACGACCACGATTCT 106756 Query 2071748 NNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGG 2071807 |||| | || || | | |||| ||| || || | Sbjct 106757 CCTTCTCGTAGCGGTGGTAGAGCTCCTCGAACTCATCACCGTAAACATCGGCAAGACCAG 106816 Query 2071808 GCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACC---ACGCGGCGCATAA 2071864 | ||||| || || || |||| ||| || || | || | ||||| ||| | Sbjct 106817 GAGCCTCATTGGGACAGAACAGCGTCCATTCACC---ATTCTCTTGGACGCGCTTCATGA 106873 Query 2071865 ACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGT 2071924 | || ||| |||||| |||| |||||||| || || ||| ||| |||||||||| Sbjct 106874 AGAGATCGGGGATCCACAAAGCGTAGAAGAGATCACGAGCGCGGACCTCTTCCTTGCCGT 106933 Query 2071925 GGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGG 2071984 ||||||| || ||| || || ||| || ||||||||||| ||||| || ||| || Sbjct 106934 GGTTCTTGCGCAAGTCAAGGAAGCCGAAGACATCGGCGTGCCATGGCTCAAGATAGATGG 106993 Query 2071985 CAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012 ||||||| || |||||| ||| || Sbjct 106994 CAAAGGCACCGGGACGCTTGTTGCCACC 107021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916239060155291