Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq6 122 6e-23
seq29 93.3 3e-14
seq16 84.2 1e-11
>seq6
Length=1708680
Score = 122 bits (134), Expect = 6e-23
Identities = 158/216 (73%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| || || | ||| |||||||| ||||| |||||||| ||| ||||| ||||
Sbjct 771421 AGGACGAGATGGAGGGTCGATTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGCCCATCC 771480
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || |||||||||| || |||||||| | || | |||||||| ||
Sbjct 771481 TCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCC 771540
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || ||||| || | ||||| || | |||||| || | ||| ||
Sbjct 771541 TGGATCTTGCTCTTGAC--AT--TGTCGATAGTATCCGAAGACTCGACCTCCAAGGTGAT 771596
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||| ||||||||||| || || |||||||||||
Sbjct 771597 GGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 771632
Score = 111 bits (122), Expect = 1e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
|||||||||||||| ||||| || || |||| | || || || |||||||| ||||||
Sbjct 771214 TCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGACCGTCCTCGAGCTGCTTTCCTGCGAAG 771273
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|||| || ||||| ||| | || | ||||||||||| | ||||| || |||
Sbjct 771274 ATCAAGCGCTGCTGATCTGGGGGAATACCCTCCTTGTCTTGGATTTTGCTCTTTACGTTA 771333
Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966
| || | || | ||||| || | ||| ||||||||||| ||||| ||||| ||
Sbjct 771334 TCAATGGTATCTGACGATTCGACCTCGAGGGTGATGGTCTTTCCTGTGAGAGTCTTGACG 771393
Query 34967 AAGATCTGCAT 34977
||||| |||||
Sbjct 771394 AAGATTTGCAT 771404
Score = 91.5 bits (100), Expect = 1e-13
Identities = 134/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | ||| |||||| |||||||| || || || ||| |||| | ||
Sbjct 771649 AGGACGAGGTGGAGGGTTGACTCCTTTTGAATGTTGTAATCGGAGAGGGTGCGGCCGTCT 771708
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||||||||||| || |||||||| | || | |||||||| ||
Sbjct 771709 TCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCC 771768
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || || ||| || || | || ||||||
Sbjct 771769 TGGATCTTGCTCTTGACGTTGTCGATAGTGTCCGAGGACTCAACCTCGAGCGTGATGGTC 771828
Query 34946 TTTCCCGTGA 34955
|| |||||||
Sbjct 771829 TTGCCCGTGA 771838
>seq29
Length=430389
Score = 93.3 bits (102), Expect = 3e-14
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||| | ||| ||||||||| ||||| ||||| || ||| | || | ||
Sbjct 67593 AGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTCC 67534
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| |||||||||||||| || |||||||| | || | |||||||||||
Sbjct 67533 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGAATTCCCTCCTTGTC 67475
>seq16
Length=934283
Score = 84.2 bits (92), Expect = 1e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||| | || ||||||||| ||||| ||||| || || |||| | ||
Sbjct 373758 AGGACCAAGTGGAGCGTTGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCC 373817
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| |||||||||||||| || |||||||| | || | |||||||| ||
Sbjct 373818 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTATC 373876
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325692526112711
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |