Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016- 05-18] 69 sequences; 38,501,010 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq6 87.8 2e-12 >seq6 Length=1708680 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 137182 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 137241 || || || || | ||| | || || || | || || || ||||| || ||||| || Sbjct 770947 TGTCCGCCACGCAGACGAAGCACCAAGTGCAGAGTGGACTCCTTTTGGATATTGTAGTCC 771006 Query 137242 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 137301 | |||| ||| ||||| |||||||| || |||| || || |||||||||||| Sbjct 771007 GAAAGAGTGCGACCGTCCTCGAGCTGTTTACCCGCGAAGATAAGGCGCTGCTGATCGGGA 771066 Query 137302 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCT 137361 || ||||| || || || ||| || |||| | || | ||||| | | || Sbjct 771067 GGGATGCCCTCCTTATCTTGAATCTTGCTCTTTACGTTGTCGATGGTGTCAGACGACTCA 771126 Query 137362 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 || || | ||| | |||||||||||||| || || ||||| || |||||| Sbjct 771127 ACCTCTAGAGTGATTGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCATA 771177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488543578630800