Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016- 05-18] 69 sequences; 38,501,010 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq17 282 4e-71 seq18 118 1e-21 seq6 107 2e-18 >seq17 Length=926260 Score = 282 bits (312), Expect = 4e-71 Identities = 1120/1748 (64%), Gaps = 41/1748 (2%) Strand=Plus/Plus Query 148053 GACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGAG---TCGCTTT 148109 ||||| ||| || ||||| || ||||||||||| ||||| | |||| ||||| Sbjct 105763 GACTGAGACTGATCGATGAAGGCACCACGGTCAGCAGCCATCTGGATGATGGTTCGCTGA 105822 Query 148110 ATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATG 148169 || ||||| | |||||||| || |||| | | || |||||| | ||| Sbjct 105823 GAG---ATTTCCCAAACAGTCTTGTAAAGAGTCTTGGTCTCTTCAGGAATGTTGGGAATG 105879 Query 148170 CGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTG 148229 || || | ||||| | | |||| || |||| ||| | || | | || Sbjct 105880 CGTTGGATGGAGCCACCTTCTGCAATGATACGATTCTTCATGTTCTCAGACCACAGACCC 105939 Query 148230 AGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACG 148289 | |||| ||| || | | ||| | | || || || || ||||| || |||||||| Sbjct 105940 ATATCGACCAGATCCTTAAGCAGCCATGGGTTGACGACTTGGAACTCACCAGCGAGCACA 105999 Query 148290 CGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGC 148349 || || || | ||| || | || ||||| |||||||||| || | ||||| Sbjct 106000 CGGCGGGAGTAGATGTTCGATGTGTATGGCTCAAAGCACTCGTTGTTTCCGAGGATCTGA 106059 Query 148350 GCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTT 148409 | ||| | ||| || |||||| || | || || |||||||| | ||| | | Sbjct 106060 GAGGTAGATGCAGTTGGCATGGGTGCAATCAAAAGAGAGTTGCGAACACCATGCTGAGCA 106119 Query 148410 ATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCG 148469 || || |||||| | ||||||||||| || | || ||||| |||||||||||| Sbjct 106120 ATCTTCTCCTTCAGGGAGGCCCAGTCCCACAGATCAGTAGGAGTCACATTCCACATGTCG 106179 Query 148470 TACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCC 148529 ||||| ||||| || | | || |||||||| | ||| || ||| | || Sbjct 106180 TACTGAAGAATACCCTGAGACACTGGCGAACCCTCGTAGGTCTGGTATGGGCCGAGTTCC 106239 Query 148530 GCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTG 148589 || | || || | ||| ||| ||| ||| || || ||| || || || Sbjct 106240 TTGGCGATGTCACAAGATGAAGTGAGGGCGGCGTGGTAGATGGTTTCGAAGATCTGGATG 106299 Query 148590 TTGAGCAGCGCCGCCGACTCGCTT-TCGTACGGCATACGCAGCCGCACAAACGCGTCGGC 148648 |||||| | ||| || || ||| | |||| ||||| || || || || || Sbjct 106300 TTGAGCTTCTTGGCCT-CTGGCGACTCGAAGGGCAAGCGCAGAGCCAGGAAAGCATCAGC 106358 Query 148649 AAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTC 148708 ||| || || || |||| |||||| |||| ||| | |||| | | || || ||| Sbjct 106359 AAGACCTTGGACACCCATGCCAATAGGCCTGTGGCGGAAGTTGCTGCGACGTGCCTCCTC 106418 Query 148709 GAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAAT 148768 || || ||||||||| ||||||||||||| | |||||| || |||| || | Sbjct 106419 GACTGGGTAGTGGTTGACCTCGATGATCTTGTTCAAATTGCGAGTGACAACCTGGGTGAC 106478 Query 148769 TCTGCGCAGCAATTCAAAATCGTACT---------TGTCATCTACGATGCATCGGTTCAC 148819 | | ||| || || ||| ||| ||| ||| || | | || || | Sbjct 106479 CTCGTGAAGCTTTTGGAAGTCGAACTCGCCACGCTTGTAATCAACAAAGGATGGG---AG 106535 Query 148820 GGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTC 148879 || | || || |||||||| || ||| ||| || || || ||||||| | |||||| Sbjct 106536 AGCAAGGGAAGCAAGATTGCAGACAGCCACCTCGTCAGGAGCAGTGTACTCGATGATCTC 106595 Query 148880 GGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCA 148939 | ||| || ||| || | ||| |||| |||||| || |||||||| |||||||| Sbjct 106596 AGTGCAGAGGTTGGAGCTTCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCA 106655 Query 148940 CGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGA---A 148996 ||||||||||| |||||| | || ||||| || ||||| || | ||| | Sbjct 106656 GGCGTCCTTGTAGAGCATGAAAGGGTTACCAGTCTCGGTCTGCGCCTCGAGAATGGCATA 106715 Query 148997 CCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAG-CGACCCTCCTGCTCGTATAAAG 149055 || | || | ||| || || || | | | || ||| ||||| |||||| Sbjct 106716 CCAAAGC---TTCTGGGCACGGACG-GTTTCACGACCACGATTCTCCTTCTCGTAGCGGT 106771 Query 149056 TATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGC 149115 || ||| ||||||| | || ||||| |||| | ||||| || || | || | Sbjct 106772 GGTAGAGCTCCTCGAACTCATCACCGTAAACATCGGCAAGACCAGGAGCCTCATTGGGAC 106831 Query 149116 ACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGA 149175 | | |||| ||| | || | | | | ||||||||||| || |||||||| | ||| | Sbjct 106832 AGAACAGCGTCCATTCACCATTCTCTTGGACGCGCTTCATGAAGAGATCGGGGATCCACA 106891 Query 149176 GCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGA 149235 ||||| | ||| || || || | ||||| ||| ||| ||||| || | Sbjct 106892 AAGCGTAGAAGAGATCACGAGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAAGTCAA 106951 Query 149236 GCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCT 149295 | | || ||| | || |||||||| ||||||| || | || | || || |||| Sbjct 106952 GGAAGCCGAAGACATCGGCGTGCCATGGCTCAAGATAGATGGCAAAGGCACCGGGACGCT 107011 Query 149296 TG---CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAA 149352 || || |||||||| |||| || | ||||||| | || || | |||||| || Sbjct 107012 TGTTGCCACCCTGGTCAACGTAACGTGCTGTGTTGTTGTAGACACGGAGCATAGG---AA 107068 Query 149353 TG---CCACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGT 149409 || ||| | | ||| ||||| || | ||| ||| || || | | Sbjct 107069 TGAGACCATTCGAAGTTCCGTTGGTGCCACCGATGTAGGAGCCTGTGGCACGGATACGAT 107128 Query 149410 GCACGTTGACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGCAG-TCGCCGAGCGT 149467 ||||||||| ||| || ||||| || || ||| ||||| || ||| || | || || Sbjct 107129 GCACGTTGAGGCCAATACCGCCAGCAGT-CTTGGAGATCAAGGCACAGGTCTTC-AGTGT 107186 Query 149468 CGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTG 149527 |||||| || || |||||||| |||||| | || ||||| ||| |||| || Sbjct 107187 GTCGTAGATACCGTCAATGCTGTCCTCTTTCATGTCAATGAGGAAGCAGGAGGACATCTG 107246 Query 149528 CGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCT 149587 || | | ||||| || ||| | || || |||||||||||| || ||||| Sbjct 107247 AGGGGATGGAGTGCCTGCGTTGAAGAGCGTCGGCGAGGCGTGTGTAAAGTACTTCTGTGA 107306 Query 149588 CATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGAC 149647 ||| ||||||| ||| | | || ||||||| ||| || ||||| | ||||| Sbjct 107307 CATGTAGTCGTACGTCTCAATGGCCTTCTCGATGTCATTGCCGTGAATGCCGACAGCGAC 107366 Query 149648 GCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCC 149707 ||||||||||| || || || ||||| || || ||| || ||| | ||| Sbjct 107367 ACGCATCAGCATGTGTTGTGGACGCTCGGCAACCTTGCCGTTGATGCGGAGGAGGTATGA 107426 Query 149708 GTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGC 149767 | || || |||||| |||| ||| ||| ||||| ||||| ||| ||| | | ||||| Sbjct 107427 GCGCTCGAGGGTCTTGAAGCCGAAGAACTGGTAGTTGAAGTCACGGTCGTAGACGATGGC 107486 Query 149768 GGCGTCGA 149775 | || || Sbjct 107487 CGAGTTGA 107494 >seq18 Length=888533 Score = 118 bits (130), Expect = 1e-21 Identities = 339/517 (66%), Gaps = 11/517 (2%) Strand=Plus/Plus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || || || || ||||| || ||||| || ||||| | | ||| ||||| | Sbjct 234339 CTGGTAATCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCTAGCGAGATGTTCTC 234398 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || ||||| |||||| | || || || || | | ||| | | ||||| Sbjct 234399 CATGAAGTCGAAGGGGTTGGTGGCATTGTAGACCTTGGTGTTGCCGAGAGCCAACAGCAG 234458 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATG-GACTGCGCGTTCATGCCCAGCAACG 120529 || || || || ||||||||||||| |||||| | || |||||||| || || | | Sbjct 234459 GCGATCGGCAACGAACTCAATGTACTGGCACATAAGGGTG-GCGTTCATACCAAGAAGTG 234517 Query 120530 CCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGG 120589 | || | ||| | || ||||| | |||||| || ||||| ||| |||| Sbjct 234518 CGCAGGGGAGAGCCTCGCTCAAGAACTCTTGCTCAATTGTGACAGCCTCAGTGATGATGG 234577 Query 120590 CGAGCATAGTGTG---GCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACG 120646 | | | || | || ||| |||| | || | | | || |||||| | Sbjct 234578 CCTGGACAGACTCCTTGCTGGGGCGGTTGT-TGAGAAGAGAGA-----AGAGCAGGCATG 234631 Query 120647 CAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGG 120706 | || || || |||| ||||||||||| || || ||||||||| || ||||| || | Sbjct 234632 CGAAATCAGTATGCATACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAATGTCAGACCTG 234691 Query 120707 GCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGC 120766 |||| | || | |||||| | || |||| |||||| ||| ||||| | || Sbjct 234692 GCATCAGACCACGCTTCTTGAGCCAAAAGATGGACGCAAAGGAGCCGCTGAAGAAGATGC 234751 Query 120767 CCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCC 120826 |||||||| ||||| ||||| | || | ||| || || | ||||| ||||| Sbjct 234752 CCTCCACGGCAGCAAATGCGACGAGACGGTTGGCGAAAGTAGAGTTCTTGTCAGAGATCC 234811 Query 120827 ACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGG 120863 | | |||||| || ||||| ||||| | ||| || Sbjct 234812 ATCGAAGGGCCCAATCAGCCTTCTTGCGAATGCAGGG 234848 >seq6 Length=1708680 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| || || |||||||| || | ||| ||| |||||||||||| || || Sbjct 770980 GTGGACTCCTTTTGGATATTGTAGTCCGAAAGAGTGCGACC-GTCCTCGAGCTGTTTACC 771038 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 |||| | || || |||||||| |||||||||||||| ||||| || ||||| ||| Sbjct 771039 CGCGAAGATAAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTATCTTGAATCTTGCTCTT 771098 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||||| | | ||| || || | |||| || |||||||||| || Sbjct 771099 TACGTTGTCGATGGTGTCAGACGACTCAACCTCTAGAGTGATTGTCTTGCCGGTCAAGGT 771158 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 771159 CTTGACGAAGATCTGCAT 771176 Score = 102 bits (112), Expect = 8e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | ||| || || ||||| || ||||| || || ||| | ||||| ||||| Sbjct 771429 ATGGAGGGTCGATTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGCCCATCCTCAAGCTG 771488 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 |||||| ||| | || | ||||||||||| ||||| ||||| ||||| || |||||| Sbjct 771489 CTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGGATCTT 771548 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||||| | || | || || | | ||| || || | ||||| ||| || || || Sbjct 771549 GCTCTTGACATTGTCGATAGTATCCGAAGACTCGACCTCCAAGGTGATGGTCTTACCCGT 771608 Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660 || ||||| ||||| |||||||| Sbjct 771609 GAGGGTTTTGACGAAGATCTGCAT 771632 Score = 98.7 bits (108), Expect = 1e-15 Identities = 126/174 (72%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||| ||||| || || || ||||||||| | ||| ||| |||||||||||||| Sbjct 771663 GGTTGACTCCTTTTGAATGTTGTAATCGGAGAGGGTGCGGCCGTCTTCGAGCTGCTTGCC 771722 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | ||||||||||| ||||||||||| ||||| || |||||| ||| Sbjct 771723 GGCGAAGATCAAGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGGATCTTGCTCTT 771782 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 || | || | ||||| | || ||| || |||| |||| ||| ||||| || Sbjct 771783 GACGTTGTCGATAGTGTCCGAGGACTCAACCTCGAGCGTGATGGTCTTGCCCGT 771836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420383049560