Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq6 91.5 1e-13
>seq6
Length=1708680
Score = 91.5 bits (100), Expect = 1e-13
Identities = 161/231 (70%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | | ||| | ||||| || || || || || || |||||||| || ||
Sbjct 771177 ACCACCACGGAGACGAAGAACCAAGTGGAGTGTAGATTCCTTCTGAATGTTGTAGTCAGA 771236
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
||| ||||| |||| || | || ||||| || || ||||| |||||||||||| | ||
Sbjct 771237 GAGAGTGCGACCGTCCTCGAGCTGCTTTCCTGCGAAGATCAAGCGCTGCTGATCTGGGGG 771296
Query 33642 CACACCTTCTTTGTC-GGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| ||| || ||||| | | ||| || ||| || | || | ||| || |||||
Sbjct 771297 AATACCCTCCTTGTCTTGGATTTTGCTCTTT--ACGTTATCAATGGTATCTGACGATTCG 771354
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| || | ||||| || || ||||| | || || || ||||| ||||||
Sbjct 771355 ACCTCGAGGGTGATGGTCTTTCCTGTGAGAGTCTTGACGAAGATTTGCATA 771405
Score = 89.7 bits (98), Expect = 3e-13
Identities = 160/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
|| || | || ||| | |||||| || |||||| ||| ||||| || ||||| || ||
Sbjct 770950 CCGCCACGCAGACGAAGCACCAAGTGCAGAGTGGACTCCTTTTGGATATTGTAGTCCGAA 771009
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| |||| || | ||||| || || || || | ||||||||||| | ||
Sbjct 771010 AGAGTGCGACCGTCCTCGAGCTGTTTACCCGCGAAGATAAGGCGCTGCTGATCGGGAGGG 771069
Query 33643 ACACCTTCTTTGTCGGCAAT-TTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| || || || || ||| || || ||| || | ||| | |||||| || || |
Sbjct 771070 ATGCCCTCCTTATCTTGAATCTTGCTCTTT--ACGTTGTCGATGGTGTCAGACGACTCAA 771127
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| || || || || || || || || ||||||||||||
Sbjct 771128 CCTCTAGAGTGATTGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCATA 771177
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328703723580480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |