Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016- 05-18] 69 sequences; 38,501,010 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq17 96.9 8e-15 >seq17 Length=926260 Score = 96.9 bits (106), Expect = 8e-15 Identities = 174/251 (69%), Gaps = 10/251 (4%) Strand=Plus/Plus Query 173106 GGCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTG 173165 |||||||||||||| ||||| || ||||| ||| | || ||| | | |||| | Sbjct 106656 GGCGTCCTTGTAGAGCATGAAAGGGTTACCAGTCTCGGTCTGCGCCTCGAGAATGGCATA 106715 Query 173166 CCAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCT--TTTTCGTATCTCTCA 173223 |||||| | ||||| ||||| ||| || | |||| || ||||| | | Sbjct 106716 CCAAAGCTTCTGGGCACGGACGGT--TTCACGACCACGATTCTCCTTCTCGTAGCGGTGG 106773 Query 173224 TAGAGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAA 173283 ||||| || ||||| || | ||||||| ||| ||||||| ||||| || || ||||| Sbjct 106774 TAGAGCTCCTCGAACTCATCACCGTAAACATCGGCAAGACCAGGAGCCTCATTGGGACAG 106833 Query 173284 AAGAGACTCCAATTTCCATCGGTCTC---GACCCTCTTCATGAAGAGGTCGGAAGTCCAA 173340 || || |||| | |||| |||| ||| | |||||||||||| |||| |||| Sbjct 106834 AACAGCGTCCATTCACCAT---TCTCTTGGACGCGCTTCATGAAGAGATCGGGGATCCAC 106890 Query 173341 ATCGCGTAGAA 173351 | |||||||| Sbjct 106891 AAAGCGTAGAA 106901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181819755196549