Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq17 205 9e-48
>seq17
Length=926260
Score = 205 bits (226), Expect = 9e-48
Identities = 628/960 (65%), Gaps = 31/960 (3%)
Strand=Plus/Plus
Query 147466 GACGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCAC 147525
|| || ||||||||||| ||| ||| || | | |||||| | ||| || | |||
Sbjct 106543 GAAGCAAGATTGCAGACAGCCACCTCGTCAGGAGCAGTGTACTCGATGATCTCAGTGCAG 106602
Query 147526 AGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCT 147585
|||||| || | || |||| || | ||| ||||| |||| ||||| |||||
Sbjct 106603 AGGTTGGAGCTTCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCGTCC 106662
Query 147586 TTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGAT---AAACCTATGC 147642
||| |||||||| | || || |||||| |||| || | || | ||| | ||
Sbjct 106663 TTGTAGAGCATGAAAGGGTTACCAGTCTCGGTCTGCGCCTCGAGAATGGCATACCAAAGC 106722
Query 147643 AGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAAC 147702
| ||| || || || | ||| || ||| || ||||| || | ||| | |
Sbjct 106723 ---TTCTGGGCACGGACGGTTTCACGACCACGATTCTCCTTCTCGTAGCGGTGGTAGAGC 106779
Query 147703 CGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGC 147762
||| ||||| || ||||| ||||||||| || ||| || || ||||| | ||||
Sbjct 106780 TCCTCGAACTCATCACCGTAAACATCGGCAAGACCAGGAGCCTCATTGGGACAGAACAGC 106839
Query 147763 GACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTAC 147822
| ||| | | | | | ||||| ||| || ||||| || | ||||| |||||
Sbjct 106840 GTCCATTCACCATTCTCTTGGACGCGCTTCATGAAGAGATCGGGGATCCACAAAGCGTAG 106899
Query 147823 ATAAGATC----GCGCG---CTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAATTAAG 147875
| ||||| ||||| || | |||| | || | ||||| ||| | |||
Sbjct 106900 AAGAGATCACGAGCGCGGACCTCT----TCCTTGCCGTGGTTCTTGCG---CAAGTCAAG 106952
Query 147876 CACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTT 147935
| || ||| ||||||||||| || |||| |||| ||| | ||||| ||||||
Sbjct 106953 GAAGCCGAAGACATCGGCGTGCCATGGCTCAAGATAGATGGCAAAGGCACCGGGACGCTT 107012
Query 147936 T---CCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAG 147992
|| |||||||| || | || | ||||||| | || || | ||| || ||
Sbjct 107013 GTTGCCACCCTGGTCAACGTAACGTGCTGTGTTGTTGTAGACACGGAGCATAGGAATGAG 107072
Query 147993 GCCGCTCGCAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCG-TGCA 148051
|| ||| ||| ||||||||| | ||| | | ||| ||| || | | || ||||
Sbjct 107073 ACCATTCGAAGTTCCGTTGGTGCCACCGATGTAGGAGCCTGTGGCACGGA-TACGATGCA 107131
Query 148052 CGTTAACGCCAATGCCGCC-GCCGTACTTTGATATGGCAGCGCAATCGCC--CAATGTCG 148108
|||| | |||||| ||||| || || ||| || || || ||| | | || |||
Sbjct 107132 CGTTGAGGCCAATACCGCCAGCAGT-CTTGGAGAT--CAAGGCACAGGTCTTCAGTGTGT 107188
Query 148109 TGTAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCG 148168
|||||| ||||| |||||||| | ||| | | ||| | || || || |||| || |
Sbjct 107189 CGTAGATACCGTCAATGCTGTCCTCTTTCATGTCAATGAGGAAGCAGGAGGACATCTGAG 107248
Query 148169 GAATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCA 148228
| | || || || ||| || || || ||||| ||||| | || || ||
Sbjct 107249 GGGATGGAGTGCCTGCGTTGAAGAGCGTCGGCGAGGCGTGTGTAAAGTACTTCTGTGACA 107308
Query 148229 TCATGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGC 148288
| | ||||||||||| || | |||||||| | |||||||||||| | ||||| |
Sbjct 107309 TGTAGTCGTACGTCTCAATGGCCTTCTCGATGTCATTGCCGTGAATGCCGACAGCGACAC 107368
Query 148289 GCATGAGCATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCAT 148348
|||| |||||||| ||||| || |||||||| | |||||| ||| || |||
Sbjct 107369 GCATCAGCATGTGTTGTGGACGCTCGGCAACCTTGCCGTTGATGCGGAGGAGGTATGAGC 107428
Query 148349 TTTCGAGGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408
|||||||| ||| | || ||| ||| ||| | || || | ||||| |||||||||
Sbjct 107429 GCTCGAGGGTCTTGAAGCCGAAGAACTGGTAGTTGAAGTCACGGTCGTAGACGATGGCCG 107488
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476610788922840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |